INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-7594 ACC RF03295 DESC mir-7594 microRNA precursor family STATES 193 NODES 43 CLEN 63 W 79 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 9 08:27:01 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/RELEASES/15.0/microrna/updates/RF03295/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.761719 CKSUM 3548952859 NULL 0.000 0.000 0.000 0.000 GA 80.00 TC 82.20 NC 41.60 EFP7GF -5.0280 0.72914 ECMLC 0.63134 -6.01306 3.37524 1600000 450105 0.002666 ECMGC 0.45535 -15.98143 -2.99432 1600000 148018 0.002702 ECMLI 0.64170 -3.79980 4.67137 1600000 275421 0.004357 ECMGI 0.48558 -11.44213 -0.08702 1600000 99239 0.004031 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 79 98 -6.800 -8.045 -0.085 -4.499 IL 1 1 2 1 4 1 9 80 100 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 11 81 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 63 - A - - MR 3 2 3 5 3 1 12 79 99 -8.294 -0.019 -6.612 1.689 -2.240 -1.885 -1.770 D 4 2 3 5 3 0 5 77 97 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 10 80 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 62 - A - - MR 6 5 3 8 5 1 12 78 98 -7.037 -0.041 -6.852 -7.064 -7.956 1.689 -2.240 -1.885 -1.770 D 7 5 3 8 5 0 4 76 96 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 8 78 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 61 u a - - MP 9 8 3 13 6 2 13 77 97 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -3.071 -3.132 -3.066 0.322 1.376 -3.724 1.848 -2.933 -3.103 0.459 -3.550 -1.365 2.249 -3.289 -0.092 -2.088 ML 10 8 3 13 6 1 6 75 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 6 75 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 1 73 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 7 76 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 8 76 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 60 C G - - MP 15 14 6 19 6 2 12 75 95 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.421 -4.315 -4.132 -0.559 -2.879 -4.560 3.509 -3.676 -4.177 -0.299 -4.452 -2.260 0.648 -4.498 -0.582 -3.021 ML 16 14 6 19 6 1 5 73 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 5 73 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 1 71 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 7 74 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 7 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 59 G C - - MP 21 20 6 25 6 2 11 73 92 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.618 -3.035 -4.706 0.282 -5.058 -4.645 -0.453 -4.940 -4.246 3.607 -4.592 -0.730 -0.842 -4.386 -2.484 -3.585 ML 22 20 6 25 6 1 5 71 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 4 71 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 1 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 6 72 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 7 72 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 58 G C - - MP 27 26 6 31 6 2 9 71 90 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.618 -3.035 -4.706 0.282 -5.058 -4.645 -0.453 -4.940 -4.246 3.607 -4.592 -0.730 -0.842 -4.386 -2.484 -3.585 ML 28 26 6 31 6 1 4 69 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 4 69 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 1 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 6 71 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 6 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 57 G C - - MP 33 32 6 37 6 2 8 69 88 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.618 -3.035 -4.706 0.282 -5.058 -4.645 -0.453 -4.940 -4.246 3.607 -4.592 -0.730 -0.842 -4.386 -2.484 -3.585 ML 34 32 6 37 6 1 4 68 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 3 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 5 69 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 5 68 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 56 c g - - MP 39 38 6 43 4 2 6 67 86 -6.878 -7.085 -0.056 -5.499 -2.488 -2.549 1.095 0.676 -2.176 -3.334 1.679 -2.680 -2.637 0.845 -3.139 -0.897 1.193 -2.759 1.531 -1.712 ML 40 38 6 43 4 1 3 67 87 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 4 1 1 67 87 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 42 38 6 43 4 0 0 66 86 -4.568 -4.250 -2.265 -0.520 IL 43 43 5 43 4 1 4 68 88 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 44 44 6 44 3 1 4 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 7 - u - - - ML 45 44 6 47 3 1 4 64 84 -7.899 -0.022 -6.553 -0.654 0.437 -1.425 0.712 D 46 44 6 47 3 0 0 63 83 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 3 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 8 - U - - - ML 48 47 3 50 3 1 4 63 83 -8.294 -0.019 -6.612 -1.366 -1.384 -2.093 1.582 D 49 47 3 50 3 0 0 62 82 -5.620 -0.734 -1.403 IL 50 50 3 50 3 1 2 64 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 55 - A - - MR 51 50 3 53 3 1 3 62 82 -8.294 -0.019 -6.612 1.689 -2.240 -1.885 -1.770 D 52 50 3 53 3 0 0 61 80 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 2 63 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 54 - U - - MR 54 53 3 56 5 1 3 61 81 -7.037 -0.041 -6.852 -7.064 -7.956 -1.366 -1.384 -2.093 1.582 D 55 53 3 56 5 0 0 60 80 -5.352 -0.707 -2.978 -4.409 -2.404 IR 56 56 3 56 5 1 1 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 9 53 c g - - MP 57 56 3 61 6 2 4 60 80 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -3.058 -2.559 -3.139 0.896 -2.749 -3.880 2.245 -3.137 -3.104 1.434 -3.555 1.372 1.071 -3.297 -0.453 -2.066 ML 58 56 3 61 6 1 1 59 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 3 61 6 1 1 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 3 61 6 0 0 57 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 60 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 60 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 10 52 A U - - MP 63 62 6 67 6 2 3 58 78 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -3.686 -2.745 -3.712 3.259 -3.999 -5.052 0.294 -3.761 -3.609 1.192 -4.151 -0.239 -0.123 -4.257 -1.647 -2.553 ML 64 62 6 67 6 1 1 58 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 57 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 56 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 58 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 11 51 u a - - MP 69 68 6 73 4 2 2 56 76 -6.878 -7.085 -0.056 -5.499 -3.366 -3.343 -3.306 0.262 -2.401 -3.923 1.868 -3.069 -3.331 0.494 -3.750 -1.429 2.280 -3.544 1.755 -2.255 ML 70 68 6 73 4 1 1 57 76 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 4 1 1 56 76 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 72 68 6 73 4 0 0 55 75 -4.568 -4.250 -2.265 -0.520 IL 73 73 5 73 4 1 1 58 78 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 74 74 6 74 3 1 1 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 12 - C - - - ML 75 74 6 77 5 1 1 54 73 -7.037 -0.041 -6.852 -7.064 -7.956 -1.584 1.579 -2.402 -1.030 D 76 74 6 77 5 0 0 53 72 -4.959 -0.803 -4.221 -2.596 -2.508 IL 77 77 3 77 5 1 1 54 73 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 13 50 G C - - MP 78 77 3 82 6 2 2 53 72 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.618 -3.035 -4.706 0.282 -5.058 -4.645 -0.453 -4.940 -4.246 3.607 -4.592 -0.730 -0.842 -4.386 -2.484 -3.585 ML 79 77 3 82 6 1 1 52 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 3 82 6 1 1 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 3 82 6 0 0 49 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 53 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 52 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 14 49 u a - - MP 84 83 6 88 6 2 2 51 70 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -3.366 -3.343 -3.306 0.262 -2.401 -3.923 1.868 -3.069 -3.331 0.494 -3.750 -1.429 2.280 -3.544 1.755 -2.255 ML 85 83 6 88 6 1 1 50 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 48 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 50 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 15 48 c g - - MP 90 89 6 94 4 2 2 49 68 -6.878 -7.085 -0.056 -5.499 -2.793 -2.793 1.187 0.552 -2.307 -3.561 2.477 -2.854 -2.894 0.802 -3.370 -1.028 1.160 -3.036 -0.168 -1.921 ML 91 89 6 94 4 1 1 49 69 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 4 1 1 49 68 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 93 89 6 94 4 0 0 48 67 -4.568 -4.250 -2.265 -0.520 IL 94 94 5 94 4 1 1 51 70 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 95 95 6 95 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 16 - G - - - ML 96 95 6 98 3 1 1 46 65 -7.899 -0.022 -6.553 -1.441 -2.639 1.689 -2.025 D 97 95 6 98 3 0 0 45 64 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 17 - C - - - ML 99 98 3 101 3 1 1 45 64 -8.294 -0.019 -6.612 -1.584 1.579 -2.402 -1.030 D 100 98 3 101 3 0 0 44 63 -5.620 -0.734 -1.403 IL 101 101 3 101 3 1 1 46 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 47 - A - - MR 102 101 3 104 3 1 1 44 63 -8.294 -0.019 -6.612 1.689 -2.240 -1.885 -1.770 D 103 101 3 104 3 0 0 43 62 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 1 45 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 46 - U - - MR 105 104 3 107 5 1 1 43 62 -7.037 -0.041 -6.852 -7.064 -7.956 -1.366 -1.384 -2.093 1.582 D 106 104 3 107 5 0 0 42 61 -5.352 -0.707 -2.978 -4.409 -2.404 IR 107 107 3 107 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 18 45 C G - - MP 108 107 3 112 6 2 2 42 61 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.421 -4.315 -4.132 -0.559 -2.879 -4.560 3.509 -3.676 -4.177 -0.299 -4.452 -2.260 0.648 -4.498 -0.582 -3.021 ML 109 107 3 112 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 3 112 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 3 112 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 19 44 c g - - MP 114 113 6 118 6 2 2 40 59 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -3.639 -3.621 -3.493 0.040 -2.421 -4.025 2.696 -3.147 -3.522 0.266 -3.891 -1.690 1.167 -3.769 1.890 -2.413 ML 115 113 6 118 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 40 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 20 43 U A - - MP 120 119 6 124 6 2 2 38 57 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.056 -3.877 -3.909 -0.182 -2.880 -4.486 1.445 -3.567 -3.915 0.093 -4.295 -1.780 3.260 -4.213 -0.560 -2.753 ML 121 119 6 124 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 38 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 21 42 C G - - MP 126 125 6 130 6 2 2 36 55 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.421 -4.315 -4.132 -0.559 -2.879 -4.560 3.509 -3.676 -4.177 -0.299 -4.452 -2.260 0.648 -4.498 -0.582 -3.021 ML 127 125 6 130 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 36 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 22 41 a u - - MP 132 131 6 136 6 2 2 34 53 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -3.267 -2.309 -3.382 2.381 -3.913 -4.611 0.319 -3.564 -3.253 1.678 -3.787 1.967 0.055 -3.769 -1.572 -2.230 ML 133 131 6 136 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 34 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 23 40 A U - - MP 138 137 6 142 6 2 2 32 51 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -3.686 -2.745 -3.712 3.259 -3.999 -5.052 0.294 -3.761 -3.609 1.192 -4.151 -0.239 -0.123 -4.257 -1.647 -2.553 ML 139 137 6 142 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 32 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 24 39 C G - - MP 144 143 6 148 6 2 2 30 49 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.421 -4.315 -4.132 -0.559 -2.879 -4.560 3.509 -3.676 -4.177 -0.299 -4.452 -2.260 0.648 -4.498 -0.582 -3.021 ML 145 143 6 148 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 30 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 25 38 A U - - MP 150 149 6 154 6 2 2 28 47 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -3.686 -2.745 -3.712 3.259 -3.999 -5.052 0.294 -3.761 -3.609 1.192 -4.151 -0.239 -0.123 -4.257 -1.647 -2.553 ML 151 149 6 154 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 26 37 C G - - MP 156 155 6 160 6 2 2 26 45 -9.081 -9.020 -0.021 -7.797 -8.077 -8.472 -4.421 -4.315 -4.132 -0.559 -2.879 -4.560 3.509 -3.676 -4.177 -0.299 -4.452 -2.260 0.648 -4.498 -0.582 -3.021 ML 157 155 6 160 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 27 36 U A - - MP 162 161 6 166 4 2 2 24 43 -6.878 -7.085 -0.056 -5.499 -4.056 -3.877 -3.909 -0.182 -2.880 -4.486 1.445 -3.567 -3.915 0.093 -4.295 -1.780 3.260 -4.213 -0.560 -2.753 ML 163 161 6 166 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 4 1 1 24 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 165 161 6 166 4 0 0 23 42 -4.568 -4.250 -2.265 -0.520 IL 166 166 5 166 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 167 167 6 167 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 28 - C - - - ML 168 167 6 170 3 1 1 21 40 -7.899 -0.022 -6.553 -1.584 1.579 -2.402 -1.030 D 169 167 6 170 3 0 0 20 39 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 29 - a - - - ML 171 170 3 173 3 1 1 20 39 -7.899 -0.022 -6.553 0.693 -1.340 0.479 -0.750 D 172 170 3 173 3 0 0 19 38 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 30 - a - - - ML 174 173 3 176 3 1 1 19 37 -7.899 -0.022 -6.553 0.609 0.234 -1.069 -0.284 D 175 173 3 176 3 0 0 18 37 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 31 - A - - - ML 177 176 3 179 3 1 1 18 36 -7.899 -0.022 -6.553 1.689 -2.240 -1.885 -1.770 D 178 176 3 179 3 0 0 17 36 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 32 - G - - - ML 180 179 3 182 3 1 1 16 35 -7.899 -0.022 -6.553 -1.441 -2.639 1.689 -2.025 D 181 179 3 182 3 0 0 16 34 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 33 - C - - - ML 183 182 3 185 3 1 1 15 33 -7.899 -0.022 -6.553 -1.584 1.579 -2.402 -1.030 D 184 182 3 185 3 0 0 15 33 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 34 - G - - - ML 186 185 3 188 3 1 1 13 32 -7.899 -0.022 -6.553 -1.441 -2.639 1.689 -2.025 D 187 185 3 188 3 0 0 13 32 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 35 - A - - - ML 189 188 3 191 2 1 1 1 1 * 0.000 1.689 -2.240 -1.885 -1.770 D 190 188 3 191 2 0 0 0 0 * 0.000 IL 191 191 3 191 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 42 ] - - - - - - E 192 191 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-7594 ACC RF03295 DESC mir-7594 microRNA precursor family LENG 63 MAXL 151 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 9 08:27:01 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/RELEASES/15.0/microrna/updates/RF03295/CM NSEQ 2 EFFN 1.792969 CKSUM 3548952859 STATS LOCAL MSV -8.3203 0.72914 STATS LOCAL VITERBI -9.3757 0.72914 STATS LOCAL FORWARD -3.0294 0.72914 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.44442 1.35300 1.27273 1.48905 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.28136 0.91959 2.09812 0.97687 1 c - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.90970 0.32148 2.65031 1.89845 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.40440 2.94287 0.22158 2.88747 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.40494 2.94343 0.22143 2.88827 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.40503 2.94352 0.22141 2.88839 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 1.35720 1.47574 1.82184 1.04332 6 u - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 1.84627 1.08003 2.38186 0.89108 7 u - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.34885 2.35825 2.85379 0.28461 8 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 1.94575 1.14947 1.07275 1.61823 9 g - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.47828 2.44610 1.59993 2.39019 10 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.35197 1.38767 2.10428 0.62881 11 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.50473 0.28562 3.07268 2.11647 12 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.40546 2.94395 0.22129 2.88902 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.35192 1.38767 2.10427 0.62882 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 1.36916 0.98361 1.87757 1.51979 15 c - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.40357 3.23680 0.21049 2.81130 16 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.50473 0.28562 3.07268 2.11647 17 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.91079 0.32132 2.65077 1.89862 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.50379 0.85345 2.26186 0.94643 19 c - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.67431 1.68955 2.38793 0.42370 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.91581 0.32057 2.65291 1.89941 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 1.04323 2.41043 0.79045 2.26077 22 g - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 0.47825 2.44618 1.59993 2.39032 23 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.91422 0.32080 2.65223 1.89916 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.47836 2.44591 1.59991 2.38988 25 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.91322 0.32095 2.65181 1.89900 26 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.67211 1.68952 2.38710 0.42405 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.50473 0.28562 3.07268 2.11647 28 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 0.90400 2.32240 1.05140 1.91350 29 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 0.96210 1.22090 2.13258 1.58760 30 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.21141 2.95638 2.70868 2.63211 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.40357 3.23680 0.21049 2.81130 32 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.50473 0.28562 3.07268 2.11647 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.40357 3.23680 0.21049 2.81130 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.21141 2.95638 2.70868 2.63211 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.48239 2.56538 1.52626 2.42525 36 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.17288 2.81824 0.27807 2.67085 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.61954 1.86220 2.26076 0.40412 38 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.17338 2.81885 0.27787 2.67163 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.62068 1.86228 2.26112 0.40392 40 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.48148 1.52565 2.21533 0.52800 41 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.17463 2.82036 0.27739 2.67358 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.48172 2.56746 1.52627 2.42808 43 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 1.81453 2.42442 0.43751 2.27389 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.17701 2.82322 0.27647 2.67729 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 2.34885 2.35825 2.85379 0.28461 46 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 0.21141 2.95638 2.70868 2.63211 47 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 1.76879 2.03985 0.59406 1.91507 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 1.11270 2.26616 0.80275 2.12424 49 g - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 3.08394 0.26185 2.76666 2.10602 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 1.11265 2.26826 0.80148 2.12731 51 g - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.62499 1.86257 2.26251 0.40317 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 1.85624 1.66828 1.03745 1.20126 53 g - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 2.34885 2.35825 2.85379 0.28461 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 0.21141 2.95638 2.70868 2.63211 55 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 1.72408 1.98522 0.64895 1.82191 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 3.10331 0.25947 2.77457 2.10980 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 3.10465 0.25931 2.77512 2.11006 58 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 3.10631 0.25910 2.77579 2.11038 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 2.17512 2.82095 0.27720 2.67435 60 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 0.74092 2.26530 1.22365 2.07649 61 a - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 62 0.21141 2.95638 2.70868 2.63211 62 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 63 0.21141 2.95638 2.70868 2.63211 63 A - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //