INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-5697 ACC RF03269 DESC mir-5697 microRNA precursor family STATES 181 NODES 37 CLEN 59 W 74 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 13:33:52 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03269/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.675781 CKSUM 1948921355 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 50.00 NC 49.40 EFP7GF -5.1916 0.72871 ECMLC 0.62808 -5.49754 3.85087 1600000 425758 0.002819 ECMGC 0.43072 -16.16377 -0.94084 1600000 281592 0.001420 ECMLI 0.63263 -3.77940 5.00092 1600000 310128 0.003869 ECMGI 0.46245 -11.28901 1.81045 1600000 170972 0.002340 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 74 93 -6.766 -8.011 -0.087 -4.464 IL 1 1 2 1 4 1 2 75 95 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 3 76 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 59 - A - - MR 3 2 3 5 3 1 4 74 93 -8.262 -0.020 -6.579 1.672 -2.171 -1.823 -1.694 D 4 2 3 5 3 0 0 72 92 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 3 75 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 58 - G - - MR 6 5 3 8 5 1 4 73 92 -7.007 -0.041 -6.822 -7.034 -7.926 -1.367 -2.552 1.669 -1.938 D 7 5 3 8 5 0 0 72 91 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 2 73 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 57 A U - - MP 9 8 3 13 6 2 5 72 91 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.631 -2.705 -3.660 3.216 -3.920 -4.968 0.370 -3.712 -3.559 1.252 -4.099 -0.208 -0.048 -4.182 -1.572 -2.504 ML 10 8 3 13 6 1 1 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 1 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 0 68 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 1 72 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 2 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 56 A U - - MP 15 14 6 19 6 2 5 70 89 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.631 -2.705 -3.660 3.216 -3.920 -4.968 0.370 -3.712 -3.559 1.252 -4.099 -0.208 -0.048 -4.182 -1.572 -2.504 ML 16 14 6 19 6 1 1 68 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 1 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 0 66 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 1 70 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 1 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 55 G C - - MP 21 20 6 25 6 2 4 68 87 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -4.550 -3.003 -4.634 0.326 -4.963 -4.618 -0.374 -4.861 -4.200 3.589 -4.551 -0.696 -0.765 -4.342 -2.402 -3.513 ML 22 20 6 25 6 1 1 67 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 1 66 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 64 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 1 68 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 1 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 54 u g - - MP 27 26 6 31 6 2 4 66 85 -9.067 -9.007 -0.165 -3.352 -8.063 -8.458 -3.890 -3.802 -3.638 -0.157 -2.460 -4.097 1.821 -3.213 -3.676 0.071 -3.990 -1.810 1.001 -3.994 2.866 -2.558 ML 28 26 6 31 6 1 1 65 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 1 64 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 62 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 1 66 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 1 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 53 a u - - MP 33 32 6 37 6 2 4 64 83 -8.926 -8.865 -0.024 -7.642 -7.921 -8.316 -3.161 -2.373 -3.210 2.629 -3.224 -4.262 1.049 -3.274 -3.138 1.796 -3.649 0.024 0.617 -3.559 -0.902 -2.091 ML 34 32 6 37 6 1 1 63 82 -7.392 -7.738 -0.455 -2.147 -7.588 -5.118 1.401 -1.428 -1.151 -0.894 MR 35 32 6 37 6 1 1 62 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 60 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 1 64 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 1 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 52 G C - - MP 39 38 6 43 6 2 4 62 81 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -4.550 -3.003 -4.634 0.326 -4.963 -4.618 -0.374 -4.861 -4.200 3.589 -4.551 -0.696 -0.765 -4.342 -2.402 -3.513 ML 40 38 6 43 6 1 1 61 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 1 60 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 58 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 1 62 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 51 U A - - MP 45 44 6 49 6 2 3 60 79 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.986 -3.804 -3.846 -0.114 -2.833 -4.429 1.490 -3.514 -3.853 0.172 -4.236 -1.709 3.221 -4.145 -0.514 -2.697 ML 46 44 6 49 6 1 1 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 58 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 56 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 60 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 59 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 50 U A - - MP 51 50 6 55 6 2 3 58 77 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.986 -3.804 -3.846 -0.114 -2.833 -4.429 1.490 -3.514 -3.853 0.172 -4.236 -1.709 3.221 -4.145 -0.514 -2.697 ML 52 50 6 55 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 56 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 54 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 58 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 57 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 49 U A - - MP 57 56 6 61 6 2 3 56 75 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.986 -3.804 -3.846 -0.114 -2.833 -4.429 1.490 -3.514 -3.853 0.172 -4.236 -1.709 3.221 -4.145 -0.514 -2.697 ML 58 56 6 61 6 1 1 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 52 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 56 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 55 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 48 C G - - MP 63 62 6 67 6 2 3 54 73 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -4.350 -4.238 -4.073 -0.489 -2.836 -4.511 3.484 -3.626 -4.116 -0.218 -4.398 -2.183 0.697 -4.432 -0.539 -2.963 ML 64 62 6 67 6 1 1 53 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 53 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 51 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 53 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 11 47 A U - - MP 69 68 6 73 4 2 2 52 71 -6.840 -7.047 -0.057 -5.461 -3.631 -2.705 -3.660 3.216 -3.920 -4.968 0.370 -3.712 -3.559 1.252 -4.099 -0.208 -0.048 -4.182 -1.572 -2.504 ML 70 68 6 73 4 1 1 52 72 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 4 1 1 52 72 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 72 68 6 73 4 0 0 51 71 -4.568 -4.250 -2.265 -0.520 IL 73 73 5 73 4 1 1 54 73 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 74 74 6 74 3 1 1 53 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 12 - U - - - ML 75 74 6 77 3 1 1 49 69 -8.262 -0.385 -2.116 -1.304 -1.332 -2.027 1.562 D 76 74 6 77 3 0 0 48 68 -5.620 -0.734 -1.403 IL 77 77 3 77 3 1 1 50 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 46 - A - - MR 78 77 3 80 5 1 1 49 68 -6.676 -0.052 -6.492 -6.704 -7.595 1.401 -1.428 -1.151 -0.894 D 79 77 3 80 5 0 0 48 67 -6.326 -0.317 -3.952 -5.383 -3.378 IR 80 80 3 80 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 45 G C - - MP 81 80 3 85 6 2 2 48 67 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -4.550 -3.003 -4.634 0.326 -4.963 -4.618 -0.374 -4.861 -4.200 3.589 -4.551 -0.696 -0.765 -4.342 -2.402 -3.513 ML 82 80 3 85 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 3 85 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 3 85 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 47 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 14 44 A U - - MP 87 86 6 91 6 2 2 46 65 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.631 -2.705 -3.660 3.216 -3.920 -4.968 0.370 -3.712 -3.559 1.252 -4.099 -0.208 -0.048 -4.182 -1.572 -2.504 ML 88 86 6 91 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 15 43 U A - - MP 93 92 6 97 6 2 2 44 63 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.986 -3.804 -3.846 -0.114 -2.833 -4.429 1.490 -3.514 -3.853 0.172 -4.236 -1.709 3.221 -4.145 -0.514 -2.697 ML 94 92 6 97 6 1 1 42 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 16 42 A U - - MP 99 98 6 103 6 2 2 42 61 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.631 -2.705 -3.660 3.216 -3.920 -4.968 0.370 -3.712 -3.559 1.252 -4.099 -0.208 -0.048 -4.182 -1.572 -2.504 ML 100 98 6 103 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 17 41 A U - - MP 105 104 6 109 6 2 2 40 59 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.631 -2.705 -3.660 3.216 -3.920 -4.968 0.370 -3.712 -3.559 1.252 -4.099 -0.208 -0.048 -4.182 -1.572 -2.504 ML 106 104 6 109 6 1 1 38 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 18 40 A U - - MP 111 110 6 115 6 2 2 38 57 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.631 -2.705 -3.660 3.216 -3.920 -4.968 0.370 -3.712 -3.559 1.252 -4.099 -0.208 -0.048 -4.182 -1.572 -2.504 ML 112 110 6 115 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 19 39 g c - - MP 117 116 6 121 6 2 2 36 55 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.592 -2.470 -3.650 1.043 -4.191 -4.423 0.235 -3.932 -3.570 2.937 -4.015 1.553 -0.054 -3.758 -1.717 -2.535 ML 118 116 6 121 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 20 38 G C - - MP 123 122 6 127 6 2 2 34 53 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -4.550 -3.003 -4.634 0.326 -4.963 -4.618 -0.374 -4.861 -4.200 3.589 -4.551 -0.696 -0.765 -4.342 -2.402 -3.513 ML 124 122 6 127 6 1 1 32 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 33 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 21 37 G C - - MP 129 128 6 133 6 2 2 32 51 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -4.550 -3.003 -4.634 0.326 -4.963 -4.618 -0.374 -4.861 -4.200 3.589 -4.551 -0.696 -0.765 -4.342 -2.402 -3.513 ML 130 128 6 133 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 31 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 22 36 U A - - MP 135 134 6 139 4 2 2 30 49 -6.840 -7.047 -0.057 -5.461 -3.986 -3.804 -3.846 -0.114 -2.833 -4.429 1.490 -3.514 -3.853 0.172 -4.236 -1.709 3.221 -4.145 -0.514 -2.697 ML 136 134 6 139 4 1 1 30 49 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 4 1 1 30 49 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 138 134 6 139 4 0 0 29 48 -4.568 -4.250 -2.265 -0.520 IL 139 139 5 139 4 1 1 32 51 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 140 140 6 140 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 23 - G - - - ML 141 140 6 143 3 1 1 27 46 -7.864 -0.022 -6.519 -1.367 -2.552 1.669 -1.938 D 142 140 6 143 3 0 0 26 45 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 24 - U - - - ML 144 143 3 146 3 1 1 26 45 -7.864 -0.022 -6.519 -1.304 -1.332 -2.027 1.562 D 145 143 3 146 3 0 0 25 44 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 25 - a - - - ML 147 146 3 149 5 1 1 25 43 -7.007 -0.041 -6.822 -7.034 -7.926 0.686 -1.311 0.466 -0.720 D 148 146 3 149 5 0 0 23 42 -4.959 -0.803 -4.221 -2.596 -2.508 IL 149 149 3 149 5 1 1 25 44 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 26 35 U A - - MP 150 149 3 154 6 2 2 24 42 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.986 -3.804 -3.846 -0.114 -2.833 -4.429 1.490 -3.514 -3.853 0.172 -4.236 -1.709 3.221 -4.145 -0.514 -2.697 ML 151 149 3 154 6 1 1 23 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 3 154 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 3 154 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 27 34 G C - - MP 156 155 6 160 6 2 2 22 40 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -4.550 -3.003 -4.634 0.326 -4.963 -4.618 -0.374 -4.861 -4.200 3.589 -4.551 -0.696 -0.765 -4.342 -2.402 -3.513 ML 157 155 6 160 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 22 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 28 33 a u - - MP 162 161 6 166 4 2 2 20 38 -6.840 -7.047 -0.057 -5.461 -3.230 -2.287 -3.344 2.354 -3.848 -4.552 0.380 -3.528 -3.222 1.715 -3.754 1.921 0.112 -3.718 -1.513 -2.198 ML 163 161 6 166 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 165 161 6 166 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 166 166 5 166 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 167 167 6 167 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 29 - G - - - ML 168 167 6 170 3 1 1 16 35 -7.864 -0.022 -6.519 -1.367 -2.552 1.669 -1.938 D 169 167 6 170 3 0 0 16 34 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 30 - A - - - ML 171 170 3 173 3 1 1 15 33 -7.864 -0.022 -6.519 1.672 -2.171 -1.823 -1.694 D 172 170 3 173 3 0 0 15 33 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 31 - G - - - ML 174 173 3 176 3 1 1 13 32 -7.864 -0.022 -6.519 -1.367 -2.552 1.669 -1.938 D 175 173 3 176 3 0 0 13 32 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 32 - a - - - ML 177 176 3 179 2 1 1 1 1 * 0.000 0.686 -1.311 0.466 -0.720 D 178 176 3 179 2 0 0 0 0 * 0.000 IL 179 179 3 179 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 36 ] - - - - - - E 180 179 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-5697 ACC RF03269 DESC mir-5697 microRNA precursor family LENG 59 MAXL 145 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 13:33:52 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03269/CM NSEQ 2 EFFN 1.894531 CKSUM 1948921355 STATS LOCAL MSV -8.2994 0.72871 STATS LOCAL VITERBI -9.1551 0.72871 STATS LOCAL FORWARD -3.1977 0.72871 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.36168 1.63696 1.26692 1.31863 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.44972 2.50334 1.64236 2.44348 1 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.44904 2.50520 1.64254 2.44634 2 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.43907 3.00160 0.21018 2.94477 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.73052 1.47039 2.49240 0.47438 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.76288 2.02420 1.34054 1.96699 5 a - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.39051 2.95035 0.22373 2.87239 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.69033 1.72691 2.43442 0.40548 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.70743 1.72725 2.44121 0.40277 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.71590 1.72742 2.44455 0.40145 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.95803 0.30479 2.70920 1.93648 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.44926 2.50459 1.64248 2.44540 11 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.39912 2.39959 2.90678 0.26946 12 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.40414 2.96472 0.21984 2.89253 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.45225 2.49650 1.64169 2.43292 14 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.71053 1.72732 2.44244 0.40229 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 0.44997 2.50265 1.64229 2.44240 16 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.44958 2.50372 1.64240 2.44407 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.44936 2.50431 1.64246 2.44497 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 1.91562 2.54252 0.37933 2.41062 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.43684 2.99924 0.21079 2.94140 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.43710 2.99952 0.21072 2.94180 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.72354 1.72757 2.44755 0.40027 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.46223 3.30491 0.19613 2.87975 23 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.39912 2.39959 2.90678 0.26946 24 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.89820 2.34589 1.04151 1.93786 25 a - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.72812 1.72766 2.44934 0.39957 26 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.44071 3.00333 0.20974 2.94725 27 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 1.02560 2.45900 0.78499 2.30483 28 g - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.46223 3.30491 0.19613 2.87975 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 0.19884 3.01156 2.75830 2.69258 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.46223 3.30491 0.19613 2.87975 31 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.89820 2.34589 1.04151 1.93786 32 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.52153 1.55628 2.26171 0.50324 33 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 3.14890 0.24768 2.82996 2.14153 34 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.45578 2.62394 1.56432 2.47339 35 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.45496 2.62667 1.56439 2.47699 36 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 3.14986 0.24757 2.83035 2.14171 37 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 3.14936 0.24763 2.83015 2.14162 38 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.63682 0.69170 2.35464 1.10034 39 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.67196 1.91049 2.31880 0.37909 40 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.67141 1.91045 2.31861 0.37918 41 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.67068 1.91039 2.31837 0.37930 42 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.45544 2.62508 1.56435 2.47489 43 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.66830 1.91020 2.31757 0.37970 44 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 3.13779 0.24897 2.82532 2.13935 45 C - - > 1.38629 1.38629 1.38629 1.38629 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547 46 0.38042 2.44836 2.25021 2.08255 46 A - - - 1.38629 1.38629 1.38629 1.38629 0.06454 3.46574 3.46574 1.46634 0.26236 0.16705 1.87180 47 2.67384 1.91064 2.31942 0.37878 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 2.21091 2.87790 0.26342 2.72225 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 0.45489 2.62693 1.56440 2.47733 49 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 0.45487 2.62697 1.56440 2.47739 50 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 0.45485 2.62707 1.56441 2.47752 51 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 3.15263 0.24725 2.83151 2.14225 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.33647 3.73767 1.33977 1.46634 0.26236 1.09861 0.40547 53 2.17685 1.48337 1.79613 0.70564 53 u - - > 1.38629 1.38629 1.38629 1.38629 0.06454 3.46574 3.46574 1.46634 0.26236 0.16705 1.87180 54 1.98269 2.66662 0.34381 2.47994 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 3.16189 0.24619 2.83534 2.14405 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.68109 1.91122 2.32184 0.37758 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 2.68277 1.91135 2.32240 0.37730 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.46223 3.30491 0.19613 2.87975 58 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 0.19884 3.01156 2.75830 2.69258 59 A - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //