INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-8196 ACC RF03226 DESC mir-8196 microRNA precursor family STATES 199 NODES 45 CLEN 65 W 81 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 18:22:22 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03226/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.503906 CKSUM 1094700250 NULL 0.000 0.000 0.000 0.000 GA 59.00 TC 59.50 NC 48.40 EFP7GF -6.4919 0.72499 ECMLC 0.57215 -6.18511 3.98579 1600000 404094 0.002970 ECMGC 0.41432 -14.55927 -0.77638 1600000 120820 0.003311 ECMLI 0.55727 -4.17820 5.60395 1600000 279670 0.004291 ECMGI 0.42257 -10.21274 2.33630 1600000 80365 0.004977 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 81 101 -6.695 -7.940 -0.091 -4.393 IL 1 1 2 1 4 1 19 83 102 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 20 83 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 65 - A - - MR 3 2 3 5 3 1 20 81 101 -8.195 -0.021 -6.513 1.633 -2.029 -1.695 -1.539 D 4 2 3 5 3 0 14 80 99 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 19 82 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 64 - A - - MR 6 5 3 8 5 1 19 80 100 -6.945 -0.043 -6.760 -6.972 -7.864 1.633 -2.029 -1.695 -1.539 D 7 5 3 8 5 0 13 79 99 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 17 80 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 63 C G - - MP 9 8 3 13 6 2 18 79 99 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -4.209 -4.081 -3.954 -0.348 -2.752 -4.410 3.430 -3.527 -3.994 -0.052 -4.289 -2.025 0.794 -4.299 -0.452 -2.846 ML 10 8 3 13 6 1 15 78 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 14 78 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 10 75 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 16 79 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 16 78 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 62 C G - - MP 15 14 6 19 6 2 17 77 97 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -4.209 -4.081 -3.954 -0.348 -2.752 -4.410 3.430 -3.527 -3.994 -0.052 -4.289 -2.025 0.794 -4.299 -0.452 -2.846 ML 16 14 6 19 6 1 13 76 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 13 76 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 9 73 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 15 77 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 15 76 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 61 C G - - MP 21 20 6 25 6 2 15 75 95 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -4.209 -4.081 -3.954 -0.348 -2.752 -4.410 3.430 -3.527 -3.994 -0.052 -4.289 -2.025 0.794 -4.299 -0.452 -2.846 ML 22 20 6 25 6 1 12 74 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 11 74 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 9 72 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 13 75 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 13 75 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 60 A U - - MP 27 26 6 31 4 2 13 73 93 -6.762 -6.969 -0.061 -5.383 -3.522 -2.626 -3.558 3.122 -3.764 -4.806 0.519 -3.615 -3.463 1.371 -3.997 -0.150 0.100 -4.037 -1.424 -2.410 ML 28 26 6 31 4 1 11 73 93 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 10 73 93 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 8 72 92 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 12 75 95 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 12 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 5 - U - - - ML 33 32 6 35 3 1 11 71 90 -8.195 -0.021 -6.513 -1.176 -1.228 -1.891 1.517 D 34 32 6 35 3 0 8 70 89 -5.620 -0.734 -1.403 IL 35 35 3 35 3 1 11 72 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 59 - U - - MR 36 35 3 38 5 1 10 70 89 -6.945 -0.043 -6.760 -6.972 -7.864 -1.176 -1.228 -1.891 1.517 D 37 35 3 38 5 0 6 68 88 -5.352 -0.707 -2.978 -4.409 -2.404 IR 38 38 3 38 5 1 9 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 6 58 A U - - MP 39 38 3 43 6 2 9 69 88 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.522 -2.626 -3.558 3.122 -3.764 -4.806 0.519 -3.615 -3.463 1.371 -3.997 -0.150 0.100 -4.037 -1.424 -2.410 ML 40 38 3 43 6 1 7 68 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 3 43 6 1 7 67 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 3 43 6 0 4 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 8 68 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 8 68 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 57 G C - - MP 45 44 6 49 4 2 7 67 86 -6.695 -7.940 -0.478 -1.898 -4.410 -2.937 -4.485 0.416 -4.765 -4.560 -0.210 -4.699 -4.103 3.547 -4.465 -0.627 -0.606 -4.248 -2.231 -3.367 ML 46 44 6 49 4 1 6 66 86 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 4 1 7 66 86 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 48 44 6 49 4 0 3 64 84 -12.737 -14.007 -2.036 -0.404 IL 49 49 5 49 4 1 7 66 86 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 50 50 6 50 3 1 8 67 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 56 - U - - MR 51 50 6 53 5 1 8 65 85 -6.638 -0.054 -6.453 -6.665 -7.557 -0.576 -0.757 -1.240 1.210 D 52 50 6 53 5 0 3 64 83 -6.252 -0.336 -3.878 -5.309 -3.303 IR 53 53 3 53 5 1 6 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 8 55 A U - - MP 54 53 3 58 6 2 8 64 84 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.522 -2.626 -3.558 3.122 -3.764 -4.806 0.519 -3.615 -3.463 1.371 -3.997 -0.150 0.100 -4.037 -1.424 -2.410 ML 55 53 3 58 6 1 4 63 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 3 58 6 1 3 62 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 3 58 6 0 0 60 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 5 64 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 5 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 9 54 A U - - MP 60 59 6 64 6 2 6 62 82 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.522 -2.626 -3.558 3.122 -3.764 -4.806 0.519 -3.615 -3.463 1.371 -3.997 -0.150 0.100 -4.037 -1.424 -2.410 ML 61 59 6 64 6 1 3 61 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 2 61 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 59 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 4 62 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 4 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 10 53 A U - - MP 66 65 6 70 4 2 5 60 80 -6.762 -6.969 -0.061 -5.383 -3.522 -2.626 -3.558 3.122 -3.764 -4.806 0.519 -3.615 -3.463 1.371 -3.997 -0.150 0.100 -4.037 -1.424 -2.410 ML 67 65 6 70 4 1 2 60 80 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 4 1 1 60 80 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 69 65 6 70 4 0 0 59 79 -4.568 -4.250 -2.265 -0.520 IL 70 70 5 70 4 1 3 61 81 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 71 71 6 71 3 1 3 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 11 - U - - - ML 72 71 6 74 3 1 3 57 77 -8.195 -0.021 -6.513 -1.176 -1.228 -1.891 1.517 D 73 71 6 74 3 0 0 56 76 -5.620 -0.734 -1.403 IL 74 74 3 74 3 1 2 58 78 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 52 - U - - MR 75 74 3 77 5 1 3 56 76 -6.945 -0.043 -6.760 -6.972 -7.864 -1.176 -1.228 -1.891 1.517 D 76 74 3 77 5 0 0 55 75 -5.352 -0.707 -2.978 -4.409 -2.404 IR 77 77 3 77 5 1 1 57 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 12 51 A U - - MP 78 77 3 82 6 2 4 55 75 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.522 -2.626 -3.558 3.122 -3.764 -4.806 0.519 -3.615 -3.463 1.371 -3.997 -0.150 0.100 -4.037 -1.424 -2.410 ML 79 77 3 82 6 1 1 54 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 3 82 6 1 1 54 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 3 82 6 0 0 52 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 55 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 55 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 13 50 U A - - MP 84 83 6 88 6 2 4 53 73 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.848 -3.659 -3.723 0.019 -2.742 -4.317 1.578 -3.412 -3.732 0.331 -4.121 -1.568 3.135 -4.011 -0.426 -2.587 ML 85 83 6 88 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 52 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 53 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 14 49 U A - - MP 90 89 6 94 4 2 2 51 71 -6.762 -6.969 -0.061 -5.383 -3.848 -3.659 -3.723 0.019 -2.742 -4.317 1.578 -3.412 -3.732 0.331 -4.121 -1.568 3.135 -4.011 -0.426 -2.587 ML 91 89 6 94 4 1 1 52 72 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 4 1 1 51 71 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 93 89 6 94 4 0 0 50 70 -4.568 -4.250 -2.265 -0.520 IL 94 94 5 94 4 1 1 53 73 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 95 95 6 95 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 15 - U - - - ML 96 95 6 98 3 1 1 49 68 -7.793 -0.023 -6.447 -1.176 -1.228 -1.891 1.517 D 97 95 6 98 3 0 0 48 67 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 16 - U - - - ML 99 98 3 101 3 1 1 48 67 -8.195 -0.021 -6.513 -1.176 -1.228 -1.891 1.517 D 100 98 3 101 3 0 0 47 66 -5.620 -0.734 -1.403 IL 101 101 3 101 3 1 1 49 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 48 - U - - MR 102 101 3 104 3 1 1 47 66 -8.195 -0.021 -6.513 -1.176 -1.228 -1.891 1.517 D 103 101 3 104 3 0 0 45 65 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 1 48 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 47 - U - - MR 105 104 3 107 5 1 1 46 65 -6.945 -0.043 -6.760 -6.972 -7.864 -1.176 -1.228 -1.891 1.517 D 106 104 3 107 5 0 0 45 64 -5.352 -0.707 -2.978 -4.409 -2.404 IR 107 107 3 107 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 17 46 C G - - MP 108 107 3 112 6 2 2 45 64 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -4.209 -4.081 -3.954 -0.348 -2.752 -4.410 3.430 -3.527 -3.994 -0.052 -4.289 -2.025 0.794 -4.299 -0.452 -2.846 ML 109 107 3 112 6 1 1 43 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 3 112 6 1 1 43 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 3 112 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 18 45 U A - - MP 114 113 6 118 6 2 2 43 62 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.848 -3.659 -3.723 0.019 -2.742 -4.317 1.578 -3.412 -3.732 0.331 -4.121 -1.568 3.135 -4.011 -0.426 -2.587 ML 115 113 6 118 6 1 1 41 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 41 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 19 44 A U - - MP 120 119 6 124 6 2 2 41 60 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.522 -2.626 -3.558 3.122 -3.764 -4.806 0.519 -3.615 -3.463 1.371 -3.997 -0.150 0.100 -4.037 -1.424 -2.410 ML 121 119 6 124 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 39 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 37 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 40 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 20 43 u g - - MP 126 125 6 130 6 2 2 39 58 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.750 -3.655 -3.529 -0.025 -2.400 -4.012 1.877 -3.137 -3.566 0.229 -3.895 -1.667 1.079 -3.866 2.752 -2.456 ML 127 125 6 130 6 1 1 38 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 36 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 38 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 21 42 g c - - MP 132 131 6 136 4 2 2 37 56 -6.762 -6.969 -0.061 -5.383 -3.518 -2.431 -3.580 1.080 -4.067 -4.357 0.333 -3.852 -3.502 2.915 -3.952 1.477 0.039 -3.691 -1.616 -2.470 ML 133 131 6 136 4 1 1 37 57 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 4 1 1 37 56 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 135 131 6 136 4 0 0 36 55 -4.568 -4.250 -2.265 -0.520 IL 136 136 5 136 4 1 1 39 58 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 137 137 6 137 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 22 - U - - - ML 138 137 6 140 3 1 1 34 53 -8.195 -0.021 -6.513 -1.176 -1.228 -1.891 1.517 D 139 137 6 140 3 0 0 33 52 -5.620 -0.734 -1.403 IL 140 140 3 140 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 41 - C - - MR 141 140 3 143 5 1 1 33 52 -6.945 -0.043 -6.760 -6.972 -7.864 -1.334 1.493 -2.140 -0.832 D 142 140 3 143 5 0 0 32 51 -5.352 -0.707 -2.978 -4.409 -2.404 IR 143 143 3 143 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 23 40 C G - - MP 144 143 3 148 6 2 2 32 51 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -4.209 -4.081 -3.954 -0.348 -2.752 -4.410 3.430 -3.527 -3.994 -0.052 -4.289 -2.025 0.794 -4.299 -0.452 -2.846 ML 145 143 3 148 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 3 148 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 3 148 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 24 39 A U - - MP 150 149 6 154 6 2 2 30 49 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.522 -2.626 -3.558 3.122 -3.764 -4.806 0.519 -3.615 -3.463 1.371 -3.997 -0.150 0.100 -4.037 -1.424 -2.410 ML 151 149 6 154 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 25 38 A U - - MP 156 155 6 160 6 2 2 28 47 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -3.522 -2.626 -3.558 3.122 -3.764 -4.806 0.519 -3.615 -3.463 1.371 -3.997 -0.150 0.100 -4.037 -1.424 -2.410 ML 157 155 6 160 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 26 37 C G - - MP 162 161 6 166 6 2 2 26 45 -9.039 -8.979 -0.022 -7.755 -8.035 -8.430 -4.209 -4.081 -3.954 -0.348 -2.752 -4.410 3.430 -3.527 -3.994 -0.052 -4.289 -2.025 0.794 -4.299 -0.452 -2.846 ML 163 161 6 166 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 6 166 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 27 36 C G - - MP 168 167 6 172 4 2 2 24 43 -6.762 -6.969 -0.061 -5.383 -4.209 -4.081 -3.954 -0.348 -2.752 -4.410 3.430 -3.527 -3.994 -0.052 -4.289 -2.025 0.794 -4.299 -0.452 -2.846 ML 169 167 6 172 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 4 1 1 24 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 171 167 6 172 4 0 0 23 42 -4.568 -4.250 -2.265 -0.520 IL 172 172 5 172 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 173 173 6 173 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 28 - U - - - ML 174 173 6 176 3 1 1 21 40 -7.793 -0.023 -6.447 -1.176 -1.228 -1.891 1.517 D 175 173 6 176 3 0 0 20 39 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 29 - C - - - ML 177 176 3 179 3 1 1 20 39 -7.793 -0.023 -6.447 -1.334 1.493 -2.140 -0.832 D 178 176 3 179 3 0 0 19 38 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 30 - U - - - ML 180 179 3 182 3 1 1 19 38 -7.793 -0.023 -6.447 -1.176 -1.228 -1.891 1.517 D 181 179 3 182 3 0 0 18 37 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 31 - U - - - ML 183 182 3 185 3 1 1 18 36 -7.793 -0.023 -6.447 -1.176 -1.228 -1.891 1.517 D 184 182 3 185 3 0 0 17 36 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 32 - G - - - ML 186 185 3 188 3 1 1 16 35 -7.793 -0.023 -6.447 -1.214 -2.372 1.623 -1.757 D 187 185 3 188 3 0 0 16 34 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 33 - u - - - ML 189 188 3 191 3 1 1 15 33 -7.793 -0.023 -6.447 -0.572 0.395 -1.332 0.692 D 190 188 3 191 3 0 0 15 33 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 34 - A - - - ML 192 191 3 194 3 1 1 13 32 -7.793 -0.023 -6.447 1.633 -2.029 -1.695 -1.539 D 193 191 3 194 3 0 0 13 32 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 35 - C - - - ML 195 194 3 197 2 1 1 1 1 * 0.000 -1.334 1.493 -2.140 -0.832 D 196 194 3 197 2 0 0 0 0 * 0.000 IL 197 197 3 197 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 44 ] - - - - - - E 198 197 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-8196 ACC RF03226 DESC mir-8196 microRNA precursor family LENG 65 MAXL 153 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 18:22:22 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03226/CM NSEQ 2 EFFN 1.816406 CKSUM 1094700250 STATS LOCAL MSV -8.1019 0.72499 STATS LOCAL VITERBI -9.1654 0.72499 STATS LOCAL FORWARD -3.1941 0.72499 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.50312 1.50278 1.52554 1.08604 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.91485 0.31841 2.66139 1.90625 1 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.92209 0.31734 2.66451 1.90741 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.92511 0.31690 2.66580 1.90789 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.47130 2.45981 1.60975 2.40328 4 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.36052 2.36784 2.86611 0.28100 5 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.47156 2.45914 1.60969 2.40222 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.41350 2.95766 0.21857 2.90238 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.47915 2.43994 1.60820 2.37220 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 0.47559 2.44887 1.60890 2.38612 9 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.47381 2.45339 1.60925 2.39320 10 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.36052 2.36784 2.86611 0.28100 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.47181 2.45851 1.60965 2.40122 12 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.68487 1.69825 2.40140 0.41828 13 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.68612 1.69826 2.40188 0.41808 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.36052 2.36784 2.86611 0.28100 15 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.36052 2.36784 2.86611 0.28100 16 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.92341 0.31715 2.66508 1.90762 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.68598 1.69826 2.40182 0.41811 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.47110 2.46033 1.60979 2.40409 19 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.69339 1.45184 2.44866 0.49135 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 1.90499 2.51575 0.38796 2.38671 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.36052 2.36784 2.86611 0.28100 22 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.92347 0.31714 2.66510 1.90763 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.47120 2.46006 1.60977 2.40367 24 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.47110 2.46034 1.60979 2.40410 25 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.92825 0.31644 2.66715 1.90839 26 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.92778 0.31651 2.66695 1.90832 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.36052 2.36784 2.86611 0.28100 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.52010 0.28105 3.08863 2.12867 29 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.36052 2.36784 2.86611 0.28100 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.36052 2.36784 2.86611 0.28100 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.41726 3.25272 0.20703 2.82730 32 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 1.85131 1.07753 2.38755 0.88994 33 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.20841 2.96923 2.72023 2.64618 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.52010 0.28105 3.08863 2.12867 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.18324 2.83404 0.27398 2.68525 36 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.18376 2.83467 0.27378 2.68606 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.63689 1.87370 2.27584 0.39727 38 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.63840 1.87381 2.27633 0.39701 39 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.18622 2.83765 0.27285 2.68990 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.52010 0.28105 3.08863 2.12867 41 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 2.61614 0.69543 2.32836 1.10685 42 c - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 1.95858 2.62200 0.35756 2.44293 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.63688 1.87370 2.27584 0.39727 44 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.47493 2.58261 1.53503 2.44132 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 2.18621 2.83764 0.27285 2.68989 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.36052 2.36784 2.86611 0.28100 47 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 2.36052 2.36784 2.86611 0.28100 48 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 0.47519 2.58177 1.53502 2.44018 49 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 0.47500 2.58238 1.53503 2.44101 50 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.63964 1.87389 2.27673 0.39680 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.36052 2.36784 2.86611 0.28100 52 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 2.62385 1.87278 2.27161 0.39953 53 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 2.62212 1.87265 2.27105 0.39983 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 2.61970 1.87248 2.27026 0.40026 55 U - - > 1.38629 1.38629 1.38629 1.38629 0.33393 3.73767 1.34674 1.46634 0.26236 1.09861 0.40547 56 1.87677 1.97971 2.34598 0.48930 56 U - - - 1.38629 1.38629 1.38629 1.38629 0.06438 3.46812 3.46812 1.46634 0.26236 0.16813 1.86591 57 3.12459 0.25539 2.79185 2.11923 57 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.64029 1.87394 2.27694 0.39669 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 2.36052 2.36784 2.86611 0.28100 59 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 2.63450 1.87353 2.27507 0.39768 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 2.18364 2.83452 0.27383 2.68587 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 62 2.18427 2.83528 0.27359 2.68685 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 63 2.18505 2.83624 0.27329 2.68808 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 64 0.20841 2.96923 2.72023 2.64618 64 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 65 0.20841 2.96923 2.72023 2.64618 65 A - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //