INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-7359 ACC RF03210 DESC mir-7359 microRNA precursor family STATES 172 NODES 37 CLEN 56 W 71 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 2 12:18:57 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/RELEASES/15.0/microrna/updates/RF03210/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.847656 CKSUM 695355955 NULL 0.000 0.000 0.000 0.000 GA 90.00 TC 90.50 NC 50.80 EFP7GF -4.7373 0.73021 ECMLC 0.65027 -3.84481 4.59084 1600000 289383 0.004147 ECMGC 0.42569 -14.57488 0.14872 1600000 210897 0.001897 ECMLI 0.61015 -3.15216 5.39213 1600000 220435 0.005444 ECMGI 0.47113 -9.65243 2.69718 1600000 134557 0.002973 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 71 90 -6.914 -7.121 -0.054 -5.535 IL 1 1 2 1 4 1 5 75 95 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 5 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 5 71 90 -8.325 -0.019 -6.643 -1.428 -1.434 -2.158 1.601 D 4 2 3 5 3 0 0 70 89 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 3 72 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 56 - a - - MR 6 5 3 8 3 1 4 70 89 -8.325 -0.019 -6.643 0.700 -1.369 0.491 -0.780 D 7 5 3 8 3 0 0 68 88 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 3 71 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 55 - u - - MR 9 8 3 11 3 1 4 69 88 -8.325 -0.019 -6.643 0.548 -0.831 -1.037 0.574 D 10 8 3 11 3 0 0 67 87 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 2 70 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 54 - U - - MR 12 11 3 14 5 1 4 68 87 -7.066 -0.040 -6.881 -7.094 -7.985 -1.428 -1.434 -2.158 1.601 D 13 11 3 14 5 0 0 67 86 -5.352 -0.707 -2.978 -4.409 -2.404 IR 14 14 3 14 5 1 1 68 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 2 53 A U - - MP 15 14 3 19 6 2 5 67 86 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -3.742 -2.786 -3.765 3.299 -4.078 -5.136 0.218 -3.810 -3.658 1.131 -4.203 -0.271 -0.199 -4.332 -1.723 -2.601 ML 16 14 3 19 6 1 1 66 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 1 1 65 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 3 19 6 0 0 63 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 1 67 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 1 66 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 3 52 G C - - MP 21 20 6 25 6 2 4 65 84 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -4.684 -3.066 -4.778 0.238 -5.151 -4.671 -0.530 -5.017 -4.290 3.624 -4.631 -0.763 -0.917 -4.430 -2.564 -3.656 ML 22 20 6 25 6 1 1 64 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 1 63 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 0 61 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 1 65 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 1 64 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 4 51 A U - - MP 27 26 6 31 6 2 4 63 82 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -3.742 -2.786 -3.765 3.299 -4.078 -5.136 0.218 -3.810 -3.658 1.131 -4.203 -0.271 -0.199 -4.332 -1.723 -2.601 ML 28 26 6 31 6 1 1 62 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 1 61 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 59 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 1 63 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 1 62 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 5 50 A U - - MP 33 32 6 37 6 2 4 61 80 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -3.742 -2.786 -3.765 3.299 -4.078 -5.136 0.218 -3.810 -3.658 1.131 -4.203 -0.271 -0.199 -4.332 -1.723 -2.601 ML 34 32 6 37 6 1 1 60 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 1 59 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 57 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 1 61 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 1 60 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 6 49 U A - - MP 39 38 6 43 6 2 4 59 78 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -4.128 -3.951 -3.973 -0.250 -2.928 -4.543 1.399 -3.620 -3.978 0.013 -4.355 -1.852 3.298 -4.282 -0.606 -2.809 ML 40 38 6 43 6 1 1 58 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 1 57 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 1 59 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 58 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 7 48 G C - - MP 45 44 6 49 6 2 3 57 76 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -4.684 -3.066 -4.778 0.238 -5.151 -4.671 -0.530 -5.017 -4.290 3.624 -4.631 -0.763 -0.917 -4.430 -2.564 -3.656 ML 46 44 6 49 6 1 1 55 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 55 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 53 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 57 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 56 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 8 47 U A - - MP 51 50 6 55 6 2 3 55 74 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -4.128 -3.951 -3.973 -0.250 -2.928 -4.543 1.399 -3.620 -3.978 0.013 -4.355 -1.852 3.298 -4.282 -0.606 -2.809 ML 52 50 6 55 6 1 1 53 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 53 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 55 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 54 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 9 46 G C - - MP 57 56 6 61 6 2 3 53 72 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -4.684 -3.066 -4.778 0.238 -5.151 -4.671 -0.530 -5.017 -4.290 3.624 -4.631 -0.763 -0.917 -4.430 -2.564 -3.656 ML 58 56 6 61 6 1 1 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 53 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 52 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 10 45 A U - - MP 63 62 6 67 6 2 3 51 70 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -3.742 -2.786 -3.765 3.299 -4.078 -5.136 0.218 -3.810 -3.658 1.131 -4.203 -0.271 -0.199 -4.332 -1.723 -2.601 ML 64 62 6 67 6 1 1 49 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 49 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 50 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 11 44 A U - - MP 69 68 6 73 6 2 2 49 68 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -3.742 -2.786 -3.765 3.299 -4.078 -5.136 0.218 -3.810 -3.658 1.131 -4.203 -0.271 -0.199 -4.332 -1.723 -2.601 ML 70 68 6 73 6 1 1 47 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 47 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 48 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 43 A U - - MP 75 74 6 79 6 2 2 47 66 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -3.742 -2.786 -3.765 3.299 -4.078 -5.136 0.218 -3.810 -3.658 1.131 -4.203 -0.271 -0.199 -4.332 -1.723 -2.601 ML 76 74 6 79 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 45 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 46 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 42 G C - - MP 81 80 6 85 6 2 2 45 64 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -4.684 -3.066 -4.778 0.238 -5.151 -4.671 -0.530 -5.017 -4.290 3.624 -4.631 -0.763 -0.917 -4.430 -2.564 -3.656 ML 82 80 6 85 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 41 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 44 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 14 41 G C - - MP 87 86 6 91 6 2 2 43 62 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -4.684 -3.066 -4.778 0.238 -5.151 -4.671 -0.530 -5.017 -4.290 3.624 -4.631 -0.763 -0.917 -4.430 -2.564 -3.656 ML 88 86 6 91 6 1 1 42 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 40 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 42 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 15 40 C G - - MP 93 92 6 97 4 2 2 41 60 -6.914 -7.121 -0.054 -5.535 -4.490 -4.391 -4.190 -0.628 -2.921 -4.610 3.532 -3.725 -4.237 -0.380 -4.505 -2.337 0.599 -4.563 -0.626 -3.079 ML 94 92 6 97 4 1 1 41 61 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 4 1 1 41 60 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 96 92 6 97 4 0 0 40 59 -4.568 -4.250 -2.265 -0.520 IL 97 97 5 97 4 1 1 43 62 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 98 98 6 98 3 1 1 42 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 16 - C - - - ML 99 98 6 101 3 1 1 38 57 -8.325 -0.019 -6.643 -1.665 1.603 -2.486 -1.094 D 100 98 6 101 3 0 0 37 56 -5.620 -0.734 -1.403 IL 101 101 3 101 3 1 1 39 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 39 - A - - MR 102 101 3 104 5 1 1 37 56 -7.066 -0.040 -6.881 -7.094 -7.985 1.705 -2.308 -1.947 -1.845 D 103 101 3 104 5 0 0 36 55 -5.352 -0.707 -2.978 -4.409 -2.404 IR 104 104 3 104 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 17 38 A U - - MP 105 104 3 109 6 2 2 36 55 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -3.742 -2.786 -3.765 3.299 -4.078 -5.136 0.218 -3.810 -3.658 1.131 -4.203 -0.271 -0.199 -4.332 -1.723 -2.601 ML 106 104 3 109 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 3 109 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 3 109 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 18 37 U A - - MP 111 110 6 115 4 2 2 34 53 -6.914 -7.121 -0.054 -5.535 -4.128 -3.951 -3.973 -0.250 -2.928 -4.543 1.399 -3.620 -3.978 0.013 -4.355 -1.852 3.298 -4.282 -0.606 -2.809 ML 112 110 6 115 4 1 1 35 54 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 4 1 1 35 54 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 114 110 6 115 4 0 0 34 53 -4.568 -4.250 -2.265 -0.520 IL 115 115 5 115 4 1 1 36 56 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 116 116 6 116 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 19 - U - - - ML 117 116 6 119 3 1 1 32 50 -8.325 -0.019 -6.643 -1.428 -1.434 -2.158 1.601 D 118 116 6 119 3 0 0 30 49 -5.620 -0.734 -1.403 IL 119 119 3 119 3 1 1 33 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 36 - C - - MR 120 119 3 122 3 1 1 31 49 -8.325 -0.019 -6.643 -1.665 1.603 -2.486 -1.094 D 121 119 3 122 3 0 0 29 48 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 1 32 50 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 35 - U - - MR 123 122 3 125 3 1 1 30 48 -8.325 -0.019 -6.643 -1.428 -1.434 -2.158 1.601 D 124 122 3 125 3 0 0 28 47 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 1 31 49 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 34 - C - - MR 126 125 3 128 5 1 1 29 47 -7.066 -0.040 -6.881 -7.094 -7.985 -1.665 1.603 -2.486 -1.094 D 127 125 3 128 5 0 0 27 46 -5.352 -0.707 -2.978 -4.409 -2.404 IR 128 128 3 128 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 20 33 A U - - MP 129 128 3 133 6 2 2 28 46 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -3.742 -2.786 -3.765 3.299 -4.078 -5.136 0.218 -3.810 -3.658 1.131 -4.203 -0.271 -0.199 -4.332 -1.723 -2.601 ML 130 128 3 133 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 3 133 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 3 133 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 21 32 G U - - MP 135 134 6 139 6 2 2 26 44 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -3.577 -2.362 -3.741 1.157 -4.426 -5.150 -0.038 -3.769 -3.413 1.410 -3.932 3.042 -0.398 -4.366 -1.980 -2.450 ML 136 134 6 139 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 22 31 A U - - MP 141 140 6 145 6 2 2 24 42 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -3.742 -2.786 -3.765 3.299 -4.078 -5.136 0.218 -3.810 -3.658 1.131 -4.203 -0.271 -0.199 -4.332 -1.723 -2.601 ML 142 140 6 145 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 23 30 C G - - MP 147 146 6 151 6 2 2 22 40 -9.095 -9.034 -0.021 -7.810 -8.090 -8.485 -4.490 -4.391 -4.190 -0.628 -2.921 -4.610 3.532 -3.725 -4.237 -0.380 -4.505 -2.337 0.599 -4.563 -0.626 -3.079 ML 148 146 6 151 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 22 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 24 29 A U - - MP 153 152 6 157 4 2 2 20 38 -6.914 -7.121 -0.054 -5.535 -3.742 -2.786 -3.765 3.299 -4.078 -5.136 0.218 -3.810 -3.658 1.131 -4.203 -0.271 -0.199 -4.332 -1.723 -2.601 ML 154 152 6 157 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 156 152 6 157 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 157 157 5 157 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 158 158 6 158 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 25 - U - - - ML 159 158 6 161 3 1 1 16 35 -7.933 -0.021 -6.587 -1.428 -1.434 -2.158 1.601 D 160 158 6 161 3 0 0 16 34 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 26 - U - - - ML 162 161 3 164 3 1 1 15 33 -7.933 -0.021 -6.587 -1.428 -1.434 -2.158 1.601 D 163 161 3 164 3 0 0 15 33 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 27 - U - - - ML 165 164 3 167 3 1 1 13 32 -7.933 -0.021 -6.587 -1.428 -1.434 -2.158 1.601 D 166 164 3 167 3 0 0 13 32 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 28 - U - - - ML 168 167 3 170 2 1 1 1 1 * 0.000 -1.428 -1.434 -2.158 1.601 D 169 167 3 170 2 0 0 0 0 * 0.000 IL 170 170 3 170 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 36 ] - - - - - - E 171 170 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-7359 ACC RF03210 DESC mir-7359 microRNA precursor family LENG 56 MAXL 141 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 2 12:18:57 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/RELEASES/15.0/microrna/updates/RF03210/CM NSEQ 2 EFFN 1.839844 CKSUM 695355955 STATS LOCAL MSV -8.2457 0.73021 STATS LOCAL VITERBI -9.0315 0.73021 STATS LOCAL FORWARD -3.3172 0.73021 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.46208 1.49622 1.53998 1.10901 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.37215 2.37740 2.87838 0.27746 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.46455 2.47324 1.61956 2.41590 2 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.42176 2.97154 0.21584 2.91603 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.46414 2.47431 1.61965 2.41758 4 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.46415 2.47428 1.61965 2.41754 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.69902 1.70704 2.41623 0.41239 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.42158 2.97135 0.21589 2.91576 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 2.69806 1.70702 2.41587 0.41254 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.42095 2.97070 0.21607 2.91483 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 0.46443 2.47356 1.61959 2.41642 10 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.46447 2.47346 1.61958 2.41625 11 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.46450 2.47337 1.61957 2.41612 12 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.42015 2.96987 0.21629 2.91364 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.42003 2.96974 0.21632 2.91346 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.93639 0.31300 2.67949 1.91669 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.53540 0.27659 3.10450 2.14083 16 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 0.46470 2.47284 1.61952 2.41529 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.69811 1.70703 2.41589 0.41253 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.37215 2.37740 2.87838 0.27746 19 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.46469 2.47287 1.61953 2.41533 20 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 1.81063 2.63402 0.37913 2.52318 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.46419 2.47418 1.61964 2.41738 22 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.94040 0.31241 2.68123 1.91733 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.46423 2.47409 1.61963 2.41723 24 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.37215 2.37740 2.87838 0.27746 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.37215 2.37740 2.87838 0.27746 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.37215 2.37740 2.87838 0.27746 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.37215 2.37740 2.87838 0.27746 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.64786 1.88477 2.28888 0.39163 29 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 2.19282 2.84884 0.27027 2.69839 30 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.65005 1.88493 2.28960 0.39126 31 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.74523 1.69414 2.44033 0.40815 32 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.65350 1.88518 2.29072 0.39067 33 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.53540 0.27659 3.10450 2.14083 34 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.37215 2.37740 2.87838 0.27746 35 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.53540 0.27659 3.10450 2.14083 36 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.46847 2.59705 1.54383 2.45360 37 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.65347 1.88518 2.29071 0.39068 38 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 0.20547 2.98201 2.73172 2.66018 39 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.19039 2.84588 0.27119 2.69458 40 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 3.12447 0.25392 2.80034 2.12450 41 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 3.12483 0.25387 2.80049 2.12457 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.64487 1.88455 2.28791 0.39214 43 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.64517 1.88457 2.28800 0.39209 44 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.64554 1.88460 2.28812 0.39203 45 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 3.12726 0.25358 2.80149 2.12504 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 0.46915 2.59484 1.54379 2.45065 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 3.12944 0.25333 2.80238 2.12546 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 0.46895 2.59549 1.54380 2.45153 49 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 2.64904 1.88486 2.28927 0.39143 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.65030 1.88495 2.28968 0.39122 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 3.13784 0.25234 2.80581 2.12708 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 2.65387 1.88521 2.29084 0.39061 53 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 2.37215 2.37740 2.87838 0.27746 54 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 1.00671 1.96147 2.10369 0.98906 55 u - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 0.90130 2.33326 1.04678 1.92475 56 a - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //