INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-3934 ACC RF03195 DESC mir-3934 microRNA precursor family STATES 280 NODES 59 CLEN 92 W 110 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 10:07:34 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03195/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 0.660156 CKSUM 3198425242 NULL 0.000 0.000 0.000 0.000 GA 84.00 TC 84.30 NC 80.90 EFP7GF -7.4845 0.71882 ECMLC 0.63923 -5.08845 3.33475 1600000 261562 0.004588 ECMGC 0.40586 -16.41969 -3.35889 1600000 80205 0.004987 ECMLI 0.60938 -3.30037 5.03875 1600000 193263 0.006209 ECMGI 0.45033 -9.66729 1.20955 1600000 53619 0.007460 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 110 130 -6.303 -6.510 -0.084 -4.924 IL 1 1 2 1 4 1 34 113 134 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 34 112 133 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - c - - - ML 3 2 3 5 3 1 34 110 130 -7.814 -0.027 -6.131 -0.486 0.981 -1.229 -0.176 D 4 2 3 5 3 0 28 108 129 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 32 110 131 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 92 - U - - MR 6 5 3 8 5 1 33 109 129 -6.595 -0.055 -6.411 -6.623 -7.514 -0.496 -0.699 -1.151 1.154 D 7 5 3 8 5 0 25 107 128 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 30 109 130 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 91 u a - - MP 9 8 3 13 6 2 33 108 128 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.283 -3.012 -3.203 0.608 -2.376 -3.835 1.924 -2.989 -3.223 1.109 -3.630 -0.915 2.539 -3.450 -0.073 -2.116 ML 10 8 3 13 6 1 27 106 127 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 26 106 127 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 21 103 124 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 29 107 128 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 29 107 127 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 90 c g - - MP 15 14 6 19 6 2 32 106 126 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.140 -2.978 -3.045 0.590 -2.158 -3.631 2.098 -2.812 -3.080 1.007 -3.470 -0.989 1.427 -3.297 1.865 -1.999 ML 16 14 6 19 6 1 26 104 125 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 25 104 125 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 20 101 122 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 28 105 126 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 28 105 125 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 89 C G - - MP 21 20 6 25 6 2 30 104 124 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.529 -3.290 -3.372 0.354 -2.375 -3.909 3.017 -3.065 -3.404 0.851 -3.755 -1.215 1.216 -3.651 -0.074 -2.285 ML 22 20 6 25 6 1 25 102 123 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 25 102 123 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 19 99 120 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 27 103 124 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 27 103 123 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 5 88 C G - - MP 27 26 6 31 6 2 29 102 122 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.529 -3.290 -3.372 0.354 -2.375 -3.909 3.017 -3.065 -3.404 0.851 -3.755 -1.215 1.216 -3.651 -0.074 -2.285 ML 28 26 6 31 6 1 24 100 121 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 23 100 121 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 19 98 118 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 26 101 122 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 26 101 121 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 6 87 u a - - MP 33 32 6 37 6 2 27 100 120 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.283 -3.012 -3.203 0.608 -2.376 -3.835 1.924 -2.989 -3.223 1.109 -3.630 -0.915 2.539 -3.450 -0.073 -2.116 ML 34 32 6 37 6 1 23 98 119 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 22 98 119 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 18 96 116 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 25 99 120 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 25 99 120 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 7 86 G C - - MP 39 38 6 43 6 2 25 98 118 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.646 -2.585 -3.698 0.882 -3.685 -4.204 0.710 -3.812 -3.517 3.194 -3.942 -0.271 0.276 -3.727 -1.283 -2.591 ML 40 38 6 43 6 1 22 97 117 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 21 96 117 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 18 94 115 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 23 97 118 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 23 97 118 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 8 85 c g - - MP 45 44 6 49 4 2 23 96 116 -6.303 -6.510 -0.084 -4.924 -3.140 -2.978 -3.045 0.590 -2.158 -3.631 2.098 -2.812 -3.080 1.007 -3.470 -0.989 1.427 -3.297 1.865 -1.999 ML 46 44 6 49 4 1 21 96 116 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 4 1 19 95 116 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 48 44 6 49 4 0 17 94 115 -4.568 -4.250 -2.265 -0.520 IL 49 49 5 49 4 1 22 97 118 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 50 50 6 50 3 1 22 96 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 9 - c - - - ML 51 50 6 53 3 1 21 93 114 -7.376 -0.031 -6.031 -0.486 0.981 -1.229 -0.176 D 52 50 6 53 3 0 17 92 112 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 21 95 116 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 10 - c - - - ML 54 53 3 56 3 1 20 92 113 -7.814 -0.027 -6.131 -0.486 0.981 -1.229 -0.176 D 55 53 3 56 3 0 16 91 111 -5.620 -0.734 -1.403 IL 56 56 3 56 3 1 20 93 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 84 - A - - MR 57 56 3 59 5 1 20 91 112 -6.595 -0.055 -6.411 -6.623 -7.514 1.303 -1.254 -0.990 -0.712 D 58 56 3 59 5 0 14 90 110 -5.352 -0.707 -2.978 -4.409 -2.404 IR 59 59 3 59 5 1 18 92 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 11 83 C G - - MP 60 59 3 64 6 2 19 90 111 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.529 -3.290 -3.372 0.354 -2.375 -3.909 3.017 -3.065 -3.404 0.851 -3.755 -1.215 1.216 -3.651 -0.074 -2.285 ML 61 59 3 64 6 1 15 89 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 3 64 6 1 14 89 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 3 64 6 0 11 86 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 17 90 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 17 90 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 12 82 C G - - MP 66 65 6 70 6 2 18 88 109 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.529 -3.290 -3.372 0.354 -2.375 -3.909 3.017 -3.065 -3.404 0.851 -3.755 -1.215 1.216 -3.651 -0.074 -2.285 ML 67 65 6 70 6 1 14 87 108 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 13 87 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 10 85 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 15 88 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 15 88 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 13 81 a u - - MP 72 71 6 76 4 2 16 86 106 -6.303 -6.510 -0.084 -4.924 -3.092 -2.326 -3.141 2.453 -3.101 -4.146 1.175 -3.198 -3.071 1.900 -3.576 0.052 0.734 -3.464 -0.781 -2.026 ML 73 71 6 76 4 1 13 86 107 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 4 1 11 86 106 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 75 71 6 76 4 0 10 85 105 -4.568 -4.250 -2.265 -0.520 IL 76 76 5 76 4 1 15 87 108 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 77 77 6 77 3 1 14 87 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 14 - a - - - ML 78 77 6 80 3 1 15 84 104 -7.814 -0.027 -6.131 0.578 -0.936 0.258 -0.343 D 79 77 6 80 3 0 9 83 103 -5.620 -0.734 -1.403 IL 80 80 3 80 3 1 13 85 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 80 - G - - MR 81 80 3 83 5 1 14 83 103 -6.595 -0.055 -6.411 -6.623 -7.514 -0.389 -1.373 1.179 -0.772 D 82 80 3 83 5 0 7 81 102 -5.352 -0.707 -2.978 -4.409 -2.404 IR 83 83 3 83 5 1 12 83 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 15 79 u a - - MP 84 83 3 88 6 2 15 82 102 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.283 -3.012 -3.203 0.608 -2.376 -3.835 1.924 -2.989 -3.223 1.109 -3.630 -0.915 2.539 -3.450 -0.073 -2.116 ML 85 83 3 88 6 1 9 80 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 3 88 6 1 9 80 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 3 88 6 0 4 78 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 11 81 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 11 81 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 16 78 u a - - MP 90 89 6 94 6 2 15 80 100 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.283 -3.012 -3.203 0.608 -2.376 -3.835 1.924 -2.989 -3.223 1.109 -3.630 -0.915 2.539 -3.450 -0.073 -2.116 ML 91 89 6 94 6 1 9 78 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 8 78 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 4 76 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 10 79 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 11 79 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 17 77 c g - - MP 96 95 6 100 6 2 14 78 98 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.140 -2.978 -3.045 0.590 -2.158 -3.631 2.098 -2.812 -3.080 1.007 -3.470 -0.989 1.427 -3.297 1.865 -1.999 ML 97 95 6 100 6 1 8 76 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 8 76 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 3 74 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 10 77 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 10 77 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 18 76 c g - - MP 102 101 6 106 6 2 13 76 96 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.140 -2.978 -3.045 0.590 -2.158 -3.631 2.098 -2.812 -3.080 1.007 -3.470 -0.989 1.427 -3.297 1.865 -1.999 ML 103 101 6 106 6 1 7 74 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 7 74 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 3 72 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 9 75 96 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 9 75 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 19 75 C G - - MP 108 107 6 112 6 2 11 74 94 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.529 -3.290 -3.372 0.354 -2.375 -3.909 3.017 -3.065 -3.404 0.851 -3.755 -1.215 1.216 -3.651 -0.074 -2.285 ML 109 107 6 112 6 1 7 72 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 6 72 92 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 2 70 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 8 73 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 8 73 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 20 74 a u - - MP 114 113 6 118 6 2 9 72 92 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.092 -2.326 -3.141 2.453 -3.101 -4.146 1.175 -3.198 -3.071 1.900 -3.576 0.052 0.734 -3.464 -0.781 -2.026 ML 115 113 6 118 6 1 6 71 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 5 71 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 2 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 7 72 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 7 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 21 73 G C - - MP 120 119 6 124 4 2 8 70 90 -6.303 -6.510 -0.084 -4.924 -3.646 -2.585 -3.698 0.882 -3.685 -4.204 0.710 -3.812 -3.517 3.194 -3.942 -0.271 0.276 -3.727 -1.283 -2.591 ML 121 119 6 124 4 1 5 70 90 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 4 1 3 69 90 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 123 119 6 124 4 0 2 68 89 -4.568 -4.250 -2.265 -0.520 IL 124 124 5 124 4 1 7 71 91 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 125 125 6 125 3 1 6 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 22 - G - - - ML 126 125 6 128 3 1 6 67 87 -7.814 -0.027 -6.131 -0.389 -1.373 1.179 -0.772 D 127 125 6 128 3 0 1 66 86 -5.620 -0.734 -1.403 IL 128 128 3 128 3 1 5 68 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 72 - G - - MR 129 128 3 131 5 1 6 66 86 -6.595 -0.055 -6.411 -6.623 -7.514 -0.389 -1.373 1.179 -0.772 D 130 128 3 131 5 0 0 65 85 -5.352 -0.707 -2.978 -4.409 -2.404 IR 131 131 3 131 5 1 4 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 23 71 u a - - MP 132 131 3 136 6 2 7 65 85 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.283 -3.012 -3.203 0.608 -2.376 -3.835 1.924 -2.989 -3.223 1.109 -3.630 -0.915 2.539 -3.450 -0.073 -2.116 ML 133 131 3 136 6 1 2 64 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 3 136 6 1 2 64 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 3 136 6 0 0 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 3 65 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 3 65 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 24 70 G C - - MP 138 137 6 142 6 2 6 63 83 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.646 -2.585 -3.698 0.882 -3.685 -4.204 0.710 -3.812 -3.517 3.194 -3.942 -0.271 0.276 -3.727 -1.283 -2.591 ML 139 137 6 142 6 1 2 62 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 2 62 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 60 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 3 63 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 3 63 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 25 69 u a - - MP 144 143 6 148 6 2 5 61 81 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.283 -3.012 -3.203 0.608 -2.376 -3.835 1.924 -2.989 -3.223 1.109 -3.630 -0.915 2.539 -3.450 -0.073 -2.116 ML 145 143 6 148 6 1 2 60 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 2 60 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 58 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 2 61 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 2 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 26 68 G C - - MP 150 149 6 154 4 2 3 59 79 -6.303 -6.510 -0.084 -4.924 -3.646 -2.585 -3.698 0.882 -3.685 -4.204 0.710 -3.812 -3.517 3.194 -3.942 -0.271 0.276 -3.727 -1.283 -2.591 ML 151 149 6 154 4 1 1 59 80 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 4 1 1 59 79 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 153 149 6 154 4 0 0 58 78 -4.568 -4.250 -2.265 -0.520 IL 154 154 5 154 4 1 2 61 81 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 155 155 6 155 3 1 2 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 27 - G - - - ML 156 155 6 158 3 1 2 57 76 -7.814 -0.027 -6.131 -0.389 -1.373 1.179 -0.772 D 157 155 6 158 3 0 0 56 75 -5.620 -0.734 -1.403 IL 158 158 3 158 3 1 1 58 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 67 - G - - MR 159 158 3 161 5 1 1 56 75 -6.595 -0.055 -6.411 -6.623 -7.514 -0.389 -1.373 1.179 -0.772 D 160 158 3 161 5 0 0 55 74 -5.352 -0.707 -2.978 -4.409 -2.404 IR 161 161 3 161 5 1 1 56 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 28 66 a u - - MP 162 161 3 166 6 2 3 55 74 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.092 -2.326 -3.141 2.453 -3.101 -4.146 1.175 -3.198 -3.071 1.900 -3.576 0.052 0.734 -3.464 -0.781 -2.026 ML 163 161 3 166 6 1 1 53 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 3 166 6 1 1 53 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 3 166 6 0 0 51 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 55 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 54 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 29 65 a u - - MP 168 167 6 172 6 2 2 53 72 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.092 -2.326 -3.141 2.453 -3.101 -4.146 1.175 -3.198 -3.071 1.900 -3.576 0.052 0.734 -3.464 -0.781 -2.026 ML 169 167 6 172 6 1 1 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 6 1 1 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 171 167 6 172 6 0 0 49 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 172 172 5 172 6 1 1 53 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 173 173 6 173 5 1 1 52 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 30 64 c g - - MP 174 173 6 178 6 2 2 51 70 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -2.212 -2.203 -0.235 1.076 -2.042 -3.110 1.822 -2.490 -2.389 1.395 -2.905 -0.483 1.414 -2.474 0.730 -1.455 ML 175 173 6 178 6 1 1 49 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 176 173 6 178 6 1 1 49 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 177 173 6 178 6 0 0 47 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 178 178 5 178 6 1 1 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 179 179 6 179 5 1 1 50 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 31 63 C G - - MP 180 179 6 184 6 2 2 49 68 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.529 -3.290 -3.372 0.354 -2.375 -3.909 3.017 -3.065 -3.404 0.851 -3.755 -1.215 1.216 -3.651 -0.074 -2.285 ML 181 179 6 184 6 1 1 47 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 182 179 6 184 6 1 1 47 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 183 179 6 184 6 0 0 45 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 184 184 5 184 6 1 1 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 185 185 6 185 5 1 1 48 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 32 62 u a - - MP 186 185 6 190 6 2 2 47 66 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.283 -3.012 -3.203 0.608 -2.376 -3.835 1.924 -2.989 -3.223 1.109 -3.630 -0.915 2.539 -3.450 -0.073 -2.116 ML 187 185 6 190 6 1 1 45 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 188 185 6 190 6 1 1 45 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 189 185 6 190 6 0 0 43 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 190 190 5 190 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 191 191 6 191 5 1 1 46 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 33 61 G C - - MP 192 191 6 196 6 2 2 45 64 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.646 -2.585 -3.698 0.882 -3.685 -4.204 0.710 -3.812 -3.517 3.194 -3.942 -0.271 0.276 -3.727 -1.283 -2.591 ML 193 191 6 196 6 1 1 43 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 194 191 6 196 6 1 1 43 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 195 191 6 196 6 0 0 41 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 196 196 5 196 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 197 197 6 197 5 1 1 44 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 34 60 a u - - MP 198 197 6 202 6 2 2 43 62 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.092 -2.326 -3.141 2.453 -3.101 -4.146 1.175 -3.198 -3.071 1.900 -3.576 0.052 0.734 -3.464 -0.781 -2.026 ML 199 197 6 202 6 1 1 42 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 200 197 6 202 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 201 197 6 202 6 0 0 40 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 202 202 5 202 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 203 203 6 203 5 1 1 42 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 35 59 G C - - MP 204 203 6 208 4 2 2 41 60 -6.303 -6.510 -0.084 -4.924 -3.646 -2.585 -3.698 0.882 -3.685 -4.204 0.710 -3.812 -3.517 3.194 -3.942 -0.271 0.276 -3.727 -1.283 -2.591 ML 205 203 6 208 4 1 1 41 61 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 206 203 6 208 4 1 1 41 60 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 207 203 6 208 4 0 0 39 59 -4.568 -4.250 -2.265 -0.520 IL 208 208 5 208 4 1 1 42 62 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 209 209 6 209 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 36 - G - - - ML 210 209 6 212 5 1 1 38 58 -6.595 -0.055 -6.411 -6.623 -7.514 -0.389 -1.373 1.179 -0.772 D 211 209 6 212 5 0 0 37 56 -4.959 -0.803 -4.221 -2.596 -2.508 IL 212 212 3 212 5 1 1 39 58 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 37 58 C G - - MP 213 212 3 217 6 2 2 37 57 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.529 -3.290 -3.372 0.354 -2.375 -3.909 3.017 -3.065 -3.404 0.851 -3.755 -1.215 1.216 -3.651 -0.074 -2.285 ML 214 212 3 217 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 215 212 3 217 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 216 212 3 217 6 0 0 33 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 217 217 5 217 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 218 218 6 218 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 38 57 a u - - MP 219 218 6 223 6 2 2 35 55 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.092 -2.326 -3.141 2.453 -3.101 -4.146 1.175 -3.198 -3.071 1.900 -3.576 0.052 0.734 -3.464 -0.781 -2.026 ML 220 218 6 223 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 221 218 6 223 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 222 218 6 223 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 223 223 5 223 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 224 224 6 224 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 39 56 g c - - MP 225 224 6 229 6 2 2 33 53 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.017 -2.113 -3.122 1.416 -3.322 -4.135 0.948 -3.234 -2.985 2.157 -3.485 1.867 0.581 -3.430 -0.989 -1.981 ML 226 224 6 229 6 1 1 32 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 227 224 6 229 6 1 1 32 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 228 224 6 229 6 0 0 30 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 229 229 5 229 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 230 230 6 230 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 40 55 G C - - MP 231 230 6 235 4 2 2 31 51 -6.303 -6.510 -0.084 -4.924 -3.646 -2.585 -3.698 0.882 -3.685 -4.204 0.710 -3.812 -3.517 3.194 -3.942 -0.271 0.276 -3.727 -1.283 -2.591 ML 232 230 6 235 4 1 1 32 51 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 233 230 6 235 4 1 1 31 51 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 234 230 6 235 4 0 0 30 50 -4.568 -4.250 -2.265 -0.520 IL 235 235 5 235 4 1 1 33 52 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 236 236 6 236 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 41 - A - - - ML 237 236 6 239 3 1 1 29 48 -7.376 -0.031 -6.031 1.303 -1.254 -0.990 -0.712 D 238 236 6 239 3 0 0 27 46 -6.174 -1.687 -0.566 IL 239 239 3 239 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 42 - a - - - ML 240 239 3 242 3 1 1 27 46 -7.814 -0.027 -6.131 0.578 -0.936 0.258 -0.343 D 241 239 3 242 3 0 0 26 45 -5.620 -0.734 -1.403 IL 242 242 3 242 3 1 1 28 47 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 48 ] - 54 - A - - MR 243 242 3 245 3 1 1 26 45 -7.814 -0.027 -6.131 1.303 -1.254 -0.990 -0.712 D 244 242 3 245 3 0 0 25 44 -6.390 -1.568 -0.620 IR 245 245 3 245 3 1 1 27 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 49 ] - 53 - A - - MR 246 245 3 248 5 1 1 25 44 -6.595 -0.055 -6.411 -6.623 -7.514 1.303 -1.254 -0.990 -0.712 D 247 245 3 248 5 0 0 24 43 -5.352 -0.707 -2.978 -4.409 -2.404 IR 248 248 3 248 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 43 52 g c - - MP 249 248 3 253 6 2 2 24 43 -8.894 -8.833 -0.024 -7.610 -7.890 -8.285 -3.017 -2.113 -3.122 1.416 -3.322 -4.135 0.948 -3.234 -2.985 2.157 -3.485 1.867 0.581 -3.430 -0.989 -1.981 ML 250 248 3 253 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 251 248 3 253 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 252 248 3 253 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 253 253 5 253 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 254 254 6 254 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 44 51 C G - - MP 255 254 6 259 4 2 2 22 41 -6.303 -6.510 -0.084 -4.924 -3.529 -3.290 -3.372 0.354 -2.375 -3.909 3.017 -3.065 -3.404 0.851 -3.755 -1.215 1.216 -3.651 -0.074 -2.285 ML 256 254 6 259 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 257 254 6 259 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 258 254 6 259 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 259 259 5 259 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 260 260 6 260 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 45 - A - - - ML 261 260 6 263 3 1 1 19 38 -7.376 -0.031 -6.031 1.303 -1.254 -0.990 -0.712 D 262 260 6 263 3 0 0 18 37 -6.174 -1.687 -0.566 IL 263 263 3 263 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 46 - G - - - ML 264 263 3 266 3 1 1 18 37 -7.376 -0.031 -6.031 -0.389 -1.373 1.179 -0.772 D 265 263 3 266 3 0 0 17 36 -6.174 -1.687 -0.566 IL 266 266 3 266 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 47 - U - - - ML 267 266 3 269 3 1 1 17 35 -7.376 -0.031 -6.031 -0.496 -0.699 -1.151 1.154 D 268 266 3 269 3 0 0 16 35 -6.174 -1.687 -0.566 IL 269 269 3 269 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 48 - G - - - ML 270 269 3 272 3 1 1 15 34 -7.376 -0.031 -6.031 -0.389 -1.373 1.179 -0.772 D 271 269 3 272 3 0 0 15 33 -6.174 -1.687 -0.566 IL 272 272 3 272 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 49 - A - - - ML 273 272 3 275 3 1 1 13 32 -7.376 -0.031 -6.031 1.303 -1.254 -0.990 -0.712 D 274 272 3 275 3 0 0 13 32 -6.174 -1.687 -0.566 IL 275 275 3 275 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 50 - A - - - ML 276 275 3 278 2 1 1 1 1 * 0.000 1.303 -1.254 -0.990 -0.712 D 277 275 3 278 2 0 0 0 0 * 0.000 IL 278 278 3 278 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 58 ] - - - - - - E 279 278 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-3934 ACC RF03195 DESC mir-3934 microRNA precursor family LENG 92 MAXL 191 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 10:07:34 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03195/CM NSEQ 2 EFFN 1.503906 CKSUM 3198425242 STATS LOCAL MSV -8.4935 0.71882 STATS LOCAL VITERBI -10.0975 0.71882 STATS LOCAL FORWARD -2.9107 0.71882 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.49074 1.46122 1.15200 1.48352 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 0.00000 * 1 2.31079 0.35147 2.86977 1.96288 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 2 2.52202 1.58610 2.21322 0.50148 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 3 2.53486 1.37972 2.26562 0.57038 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 4 2.76202 0.37757 2.47343 1.78968 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 5 2.76183 0.37760 2.47335 1.78965 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 6 2.52388 1.58606 2.21383 0.50114 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 7 2.30385 2.76657 0.25984 2.71696 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 8 2.53396 1.37979 2.26529 0.57053 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 9 2.31079 0.35147 2.86977 1.96288 9 C - - - 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 10 2.31079 0.35147 2.86977 1.96288 10 C - - - 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 11 2.75562 0.37870 2.47093 1.78875 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 12 2.75951 0.37801 2.47245 1.78931 12 C - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 13 0.57574 2.27752 1.48074 2.22839 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 14 0.92145 2.25449 1.08218 1.84340 14 a - - - 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 15 2.51966 1.58615 2.21243 0.50192 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 16 2.52253 1.58608 2.21339 0.50139 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 17 2.53446 1.37975 2.26547 0.57045 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 18 2.53461 1.37973 2.26553 0.57042 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 19 2.76077 0.37779 2.47294 1.78950 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 20 0.57579 2.27741 1.48074 2.22820 20 A - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 21 2.30337 2.76613 0.25999 2.71631 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 22 2.22773 3.03072 0.26138 2.60427 22 G - - - 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 23 2.51914 1.58616 2.21226 0.50202 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 24 2.30295 2.76575 0.26013 2.71574 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 25 2.52334 1.58607 2.21365 0.50124 25 U - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 26 2.30393 2.76664 0.25982 2.71707 26 G - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 27 2.22773 3.03072 0.26138 2.60427 27 G - - - 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 28 0.57631 2.27636 1.48079 2.22640 28 A - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 29 0.57589 2.27721 1.48075 2.22785 29 A - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 30 1.40718 1.44328 1.71862 1.07969 30 u - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 31 2.76099 0.37775 2.47303 1.78953 31 C - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 32 2.52344 1.58607 2.21369 0.50122 32 U - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 33 2.30361 2.76635 0.25992 2.71663 33 G - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 34 0.57584 2.27731 1.48075 2.22802 34 A - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 35 2.30312 2.76591 0.26007 2.71597 35 G - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 36 2.22773 3.03072 0.26138 2.60427 36 G - - - 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 37 2.75761 0.37834 2.47171 1.78904 37 C - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 38 0.57589 2.27721 1.48075 2.22786 38 A - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 39 1.74256 2.44330 0.44304 2.34368 39 G - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 40 2.30339 2.76615 0.25999 2.71633 40 G - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 41 0.25424 2.79246 2.56124 2.45321 41 A - - - 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 42 0.92145 2.25449 1.08218 1.84340 42 a - - - 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 43 1.74151 2.44180 0.44386 2.34146 43 G - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 44 2.75904 0.37809 2.47227 1.78925 44 C - - < 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 45 0.25424 2.79246 2.56124 2.45321 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 46 2.22773 3.03072 0.26138 2.60427 46 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 47 2.20137 2.23766 2.69729 0.33512 47 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 48 2.22773 3.03072 0.26138 2.60427 48 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 49 0.25424 2.79246 2.56124 2.45321 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 50 0.25424 2.79246 2.56124 2.45321 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 51 2.06390 2.64017 0.32687 2.51934 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 52 2.56952 1.54318 2.25292 0.50313 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 53 0.25424 2.79246 2.56124 2.45321 53 A - - - 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 54 0.25424 2.79246 2.56124 2.45321 54 A - - - 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 55 2.93202 0.30382 2.59366 2.01012 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 56 2.56028 1.54348 2.24979 0.50475 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 57 2.45333 1.72595 2.09209 0.49011 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 58 2.05523 2.63070 0.33081 2.50635 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 59 2.93483 0.30341 2.59473 2.01067 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 60 2.45963 1.72612 2.09386 0.48882 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 61 2.93648 0.30317 2.59536 2.01099 61 C - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 62 0.57160 2.38891 1.42248 2.27758 62 A - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 63 2.06294 2.63912 0.32730 2.51789 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 64 1.66718 1.88024 0.72998 1.73302 64 g - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 65 2.46329 1.72622 2.09488 0.48808 65 U - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 66 2.46444 1.72625 2.09520 0.48785 66 U - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 67 2.22773 3.03072 0.26138 2.60427 67 G - - - 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 68 2.93877 0.30284 2.59623 2.01144 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 69 0.57137 2.38949 1.42243 2.27844 69 A - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 70 2.94211 0.30235 2.59750 2.01209 70 C - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 71 0.57104 2.39031 1.42236 2.27966 71 A - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 72 2.22773 3.03072 0.26138 2.60427 72 G - - - 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 73 2.93561 0.30330 2.59503 2.01082 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 74 2.46015 1.72614 2.09400 0.48871 74 U - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 75 2.06256 2.63870 0.32747 2.51732 75 G - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 76 1.86001 2.43561 0.42260 2.28822 76 G - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 77 1.86034 2.43597 0.42240 2.28872 77 G - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 78 0.57119 2.38993 1.42239 2.27909 78 A - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 79 0.57102 2.39038 1.42235 2.27976 79 A - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 80 2.22773 3.03072 0.26138 2.60427 80 G - - - 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 81 2.46233 1.72620 2.09462 0.48827 81 U - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 82 2.06399 2.64027 0.32683 2.51947 82 G - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 83 2.06463 2.64097 0.32654 2.52043 83 G - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 84 0.25424 2.79246 2.56124 2.45321 84 A - - - 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 85 1.85940 2.43493 0.42298 2.28729 85 G - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 86 2.93704 0.30309 2.59558 2.01110 86 C - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 87 0.57154 2.38905 1.42247 2.27780 87 A - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 88 2.06319 2.63939 0.32719 2.51827 88 G - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 89 2.06372 2.63997 0.32695 2.51906 89 G - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 90 1.86098 2.43667 0.42201 2.28968 90 G - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 91 0.57090 2.39069 1.42233 2.28021 91 A - - > 1.38629 1.38629 1.38629 1.38629 0.05320 3.65329 3.65329 1.46634 0.26236 1.09861 0.40547 92 2.20137 2.23766 2.69729 0.33512 92 U - - : 1.38629 1.38629 1.38629 1.38629 0.02695 3.62705 * 1.46634 0.26236 0.00000 * //