INFERNAL1/a [1.1.5 | Sep 2023] NAME mir-6794 ACC RF03192 DESC mir-6794 microRNA precursor family STATES 190 NODES 42 CLEN 62 W 77 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 03:17:56 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03192/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.441406 CKSUM 2211242543 NULL 0.000 0.000 0.000 0.000 GA 74.00 TC 75.30 NC 72.70 EFP7GF -6.3749 0.72561 ECMLC 0.57431 -7.26469 3.16970 1600000 480519 0.002497 ECMGC 0.50115 -14.39692 -1.66586 1600000 236018 0.001695 ECMLI 0.57391 -5.42372 4.12595 1600000 288011 0.004167 ECMGI 0.49872 -10.83642 1.03384 1600000 148957 0.002685 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 77 96 -6.733 -6.940 -0.062 -5.354 IL 1 1 2 1 4 1 4 81 101 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 4 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 4 77 96 -7.766 -0.024 -6.420 -1.272 1.469 -2.075 -0.783 D 4 2 3 5 3 0 0 75 95 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 3 79 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 3 76 95 -8.170 -0.021 -6.488 1.617 -1.976 -1.647 -1.482 D 7 5 3 8 3 0 0 74 93 -5.620 -0.734 -1.403 IL 8 8 3 8 3 1 2 76 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 62 - A - - MR 9 8 3 11 3 1 3 75 94 -8.170 -0.021 -6.488 1.617 -1.976 -1.647 -1.482 D 10 8 3 11 3 0 0 73 92 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 1 75 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 61 - U - - MR 12 11 3 14 3 1 2 74 93 -8.170 -0.021 -6.488 -1.129 -1.190 -1.841 1.498 D 13 11 3 14 3 0 0 72 91 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 1 74 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 60 - C - - MR 15 14 3 17 3 1 2 73 92 -8.170 -0.021 -6.488 -1.272 1.469 -2.075 -0.783 D 16 14 3 17 3 0 0 71 90 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 1 73 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 59 - C - - MR 18 17 3 20 5 1 2 72 91 -6.922 -0.044 -6.737 -6.949 -7.841 -1.272 1.469 -2.075 -0.783 D 19 17 3 20 5 0 0 70 89 -5.352 -0.707 -2.978 -4.409 -2.404 IR 20 20 3 20 5 1 1 72 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 3 58 G C - - MP 21 20 3 25 6 2 3 71 90 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -4.358 -2.913 -4.429 0.449 -4.691 -4.538 -0.149 -4.639 -4.066 3.531 -4.432 -0.601 -0.546 -4.213 -2.167 -3.312 ML 22 20 3 25 6 1 1 69 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 3 25 6 1 1 69 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 3 25 6 0 0 67 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 1 70 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 1 70 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 4 57 g u - - MP 27 26 6 31 6 2 2 69 88 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -3.373 -2.245 -3.518 1.270 -4.034 -4.771 0.310 -3.577 -3.253 1.683 -3.762 2.771 -0.051 -4.022 -1.629 -2.275 ML 28 26 6 31 6 1 1 67 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 1 67 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 0 65 84 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 1 68 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 1 68 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 5 56 G C - - MP 33 32 6 37 6 2 2 67 86 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -4.358 -2.913 -4.429 0.449 -4.691 -4.538 -0.149 -4.639 -4.066 3.531 -4.432 -0.601 -0.546 -4.213 -2.167 -3.312 ML 34 32 6 37 6 1 1 65 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 1 65 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 0 63 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 1 66 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 1 66 85 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 6 55 G C - - MP 39 38 6 43 6 2 2 65 84 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -4.358 -2.913 -4.429 0.449 -4.691 -4.538 -0.149 -4.639 -4.066 3.531 -4.432 -0.601 -0.546 -4.213 -2.167 -3.312 ML 40 38 6 43 6 1 1 63 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 1 63 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 0 61 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 1 64 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 1 64 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 7 54 G C - - MP 45 44 6 49 6 2 2 63 82 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -4.358 -2.913 -4.429 0.449 -4.691 -4.538 -0.149 -4.639 -4.066 3.531 -4.432 -0.601 -0.546 -4.213 -2.167 -3.312 ML 46 44 6 49 6 1 1 61 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 1 61 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 0 59 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 62 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 8 53 A U - - MP 51 50 6 55 6 2 2 61 80 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -3.483 -2.598 -3.521 3.085 -3.709 -4.749 0.572 -3.581 -3.429 1.413 -3.961 -0.130 0.153 -3.986 -1.371 -2.376 ML 52 50 6 55 6 1 1 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 57 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 60 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 60 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 9 52 C G - - MP 57 56 6 61 6 2 2 59 78 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -4.157 -4.024 -3.910 -0.296 -2.722 -4.373 3.408 -3.491 -3.949 0.010 -4.250 -1.967 0.828 -4.250 -0.421 -2.804 ML 58 56 6 61 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 57 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 58 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 10 51 u a - - MP 63 62 6 67 6 2 2 57 76 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -3.240 -3.199 -3.192 0.391 -2.327 -3.823 1.933 -2.982 -3.220 0.657 -3.645 -1.281 2.211 -3.420 1.597 -2.148 ML 64 62 6 67 6 1 1 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 53 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 56 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 11 50 G C - - MP 69 68 6 73 6 2 2 55 74 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -4.358 -2.913 -4.429 0.449 -4.691 -4.538 -0.149 -4.639 -4.066 3.531 -4.432 -0.601 -0.546 -4.213 -2.167 -3.312 ML 70 68 6 73 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 12 49 g u - - MP 75 74 6 79 6 2 2 53 72 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -3.373 -2.245 -3.518 1.270 -4.034 -4.771 0.310 -3.577 -3.253 1.683 -3.762 2.771 -0.051 -4.022 -1.629 -2.275 ML 76 74 6 79 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 51 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 13 48 G C - - MP 81 80 6 85 6 2 2 51 70 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -4.358 -2.913 -4.429 0.449 -4.691 -4.538 -0.149 -4.639 -4.066 3.531 -4.432 -0.601 -0.546 -4.213 -2.167 -3.312 ML 82 80 6 85 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 14 47 g u - - MP 87 86 6 91 6 2 2 49 68 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -3.373 -2.245 -3.518 1.270 -4.034 -4.771 0.310 -3.577 -3.253 1.683 -3.762 2.771 -0.051 -4.022 -1.629 -2.275 ML 88 86 6 91 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 15 46 G C - - MP 93 92 6 97 6 2 2 47 66 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -4.358 -2.913 -4.429 0.449 -4.691 -4.538 -0.149 -4.639 -4.066 3.531 -4.432 -0.601 -0.546 -4.213 -2.167 -3.312 ML 94 92 6 97 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 45 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 16 45 U A - - MP 99 98 6 103 6 2 2 45 64 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -3.800 -3.608 -3.679 0.066 -2.710 -4.277 1.608 -3.376 -3.688 0.389 -4.080 -1.518 3.101 -3.963 -0.396 -2.548 ML 100 98 6 103 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 17 44 G C - - MP 105 104 6 109 6 2 2 43 62 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -4.358 -2.913 -4.429 0.449 -4.691 -4.538 -0.149 -4.639 -4.066 3.531 -4.432 -0.601 -0.546 -4.213 -2.167 -3.312 ML 106 104 6 109 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 18 43 A U - - MP 111 110 6 115 6 2 2 40 60 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -3.483 -2.598 -3.521 3.085 -3.709 -4.749 0.572 -3.581 -3.429 1.413 -3.961 -0.130 0.153 -3.986 -1.371 -2.376 ML 112 110 6 115 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 19 42 G C - - MP 117 116 6 121 6 2 2 38 58 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -4.358 -2.913 -4.429 0.449 -4.691 -4.538 -0.149 -4.639 -4.066 3.531 -4.432 -0.601 -0.546 -4.213 -2.167 -3.312 ML 118 116 6 121 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 20 41 C G - - MP 123 122 6 127 6 2 2 36 56 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -4.157 -4.024 -3.910 -0.296 -2.722 -4.373 3.408 -3.491 -3.949 0.010 -4.250 -1.967 0.828 -4.250 -0.421 -2.804 ML 124 122 6 127 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 21 40 A U - - MP 129 128 6 133 4 2 2 34 54 -6.668 -7.913 -0.093 -4.367 -3.483 -2.598 -3.521 3.085 -3.709 -4.749 0.572 -3.581 -3.429 1.413 -3.961 -0.130 0.153 -3.986 -1.371 -2.376 ML 130 128 6 133 4 1 1 34 53 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 4 1 1 34 53 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 132 128 6 133 4 0 0 32 51 -12.737 -14.007 -2.036 -0.404 IL 133 133 5 133 4 1 1 34 53 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 134 134 6 134 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 39 - G - - MR 135 134 6 137 3 1 1 32 52 -8.170 -0.021 -6.488 -1.157 -2.305 1.604 -1.689 D 136 134 6 137 3 0 0 31 50 -6.390 -1.568 -0.620 IR 137 137 3 137 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 38 - C - - MR 138 137 3 140 5 1 1 31 51 -6.922 -0.044 -6.737 -6.949 -7.841 -1.272 1.469 -2.075 -0.783 D 139 137 3 140 5 0 0 30 49 -5.352 -0.707 -2.978 -4.409 -2.404 IR 140 140 3 140 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 22 37 g u - - MP 141 140 3 145 6 2 2 30 50 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -3.373 -2.245 -3.518 1.270 -4.034 -4.771 0.310 -3.577 -3.253 1.683 -3.762 2.771 -0.051 -4.022 -1.629 -2.275 ML 142 140 3 145 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 3 145 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 3 145 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 23 36 G C - - MP 147 146 6 151 6 2 2 28 48 -9.029 -8.968 -0.022 -7.745 -8.025 -8.420 -4.358 -2.913 -4.429 0.449 -4.691 -4.538 -0.149 -4.639 -4.066 3.531 -4.432 -0.601 -0.546 -4.213 -2.167 -3.312 ML 148 146 6 151 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 24 35 C G - - MP 153 152 6 157 4 2 2 26 46 -6.733 -6.940 -0.062 -5.354 -4.157 -4.024 -3.910 -0.296 -2.722 -4.373 3.408 -3.491 -3.949 0.010 -4.250 -1.967 0.828 -4.250 -0.421 -2.804 ML 154 152 6 157 4 1 1 27 46 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 4 1 1 27 46 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 156 152 6 157 4 0 0 26 45 -4.568 -4.250 -2.265 -0.520 IL 157 157 5 157 4 1 1 28 48 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 158 158 6 158 3 1 1 27 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 25 - a - - - ML 159 158 6 161 3 1 1 24 43 -7.766 -0.024 -6.420 0.580 0.186 -0.985 -0.214 D 160 158 6 161 3 0 0 23 42 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 26 - C - - - ML 162 161 3 164 3 1 1 23 41 -7.766 -0.024 -6.420 -1.272 1.469 -2.075 -0.783 D 163 161 3 164 3 0 0 21 40 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 27 - A - - - ML 165 164 3 167 3 1 1 21 40 -7.766 -0.024 -6.420 1.617 -1.976 -1.647 -1.482 D 166 164 3 167 3 0 0 20 39 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 28 - G - - - ML 168 167 3 170 3 1 1 20 39 -7.766 -0.024 -6.420 -1.157 -2.305 1.604 -1.689 D 169 167 3 170 3 0 0 19 38 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 29 - A - - - ML 171 170 3 173 3 1 1 19 38 -7.766 -0.024 -6.420 1.617 -1.976 -1.647 -1.482 D 172 170 3 173 3 0 0 18 37 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 30 - a - - - ML 174 173 3 176 3 1 1 18 36 -7.766 -0.024 -6.420 0.580 0.186 -0.985 -0.214 D 175 173 3 176 3 0 0 17 36 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 31 - C - - - ML 177 176 3 179 3 1 1 16 35 -7.766 -0.024 -6.420 -1.272 1.469 -2.075 -0.783 D 178 176 3 179 3 0 0 16 34 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 32 - C - - - ML 180 179 3 182 3 1 1 15 33 -7.766 -0.024 -6.420 -1.272 1.469 -2.075 -0.783 D 181 179 3 182 3 0 0 15 33 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 33 - C - - - ML 183 182 3 185 3 1 1 13 32 -7.766 -0.024 -6.420 -1.272 1.469 -2.075 -0.783 D 184 182 3 185 3 0 0 13 32 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 34 - A - - - ML 186 185 3 188 2 1 1 1 1 * 0.000 1.617 -1.976 -1.647 -1.482 D 187 185 3 188 2 0 0 0 0 * 0.000 IL 188 188 3 188 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 41 ] - - - - - - E 189 188 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME mir-6794 ACC RF03192 DESC mir-6794 microRNA precursor family LENG 62 MAXL 149 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 03:17:56 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03192/CM NSEQ 2 EFFN 1.652344 CKSUM 2211242543 STATS LOCAL MSV -8.1785 0.72561 STATS LOCAL VITERBI -9.1779 0.72561 STATS LOCAL FORWARD -2.9420 0.72561 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.63017 1.15867 1.22116 1.63315 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.41133 0.31532 2.97533 2.04241 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 0.23082 2.87791 2.63811 2.54632 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.35391 2.85699 0.23959 2.80322 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 1.77173 2.52815 0.41316 2.42365 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.35684 2.85985 0.23871 2.80739 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.35694 2.85995 0.23868 2.80753 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.35678 2.85979 0.23873 2.80730 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.52319 2.36340 1.54139 2.31073 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.83956 0.34707 2.56589 1.84552 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.31170 1.36688 2.05745 0.65734 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.35578 2.85881 0.23903 2.80587 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 1.77154 2.52785 0.41330 2.42322 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.35543 2.85847 0.23914 2.80538 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 1.77143 2.52769 0.41338 2.42298 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.35519 2.85824 0.23921 2.80504 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.59768 1.63820 2.30204 0.46018 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.35503 2.85808 0.23926 2.80481 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 0.52348 2.36273 1.54137 2.30964 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.35492 2.85797 0.23929 2.80465 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.83698 0.34749 2.56483 1.84512 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.52351 2.36268 1.54137 2.30955 21 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 1.76783 2.52208 0.41607 2.41494 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.35129 2.85444 0.24038 2.79951 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.83505 0.34780 2.56404 1.84483 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.97074 1.23472 2.10743 1.56670 25 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.41133 0.31532 2.97533 2.04241 26 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.23082 2.87791 2.63811 2.54632 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.31963 3.13879 0.23319 2.71280 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 0.23082 2.87791 2.63811 2.54632 29 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 0.97074 1.23472 2.10743 1.56670 30 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.41133 0.31532 2.97533 2.04241 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.41133 0.31532 2.97533 2.04241 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 2.41133 0.31532 2.97533 2.04241 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.23082 2.87791 2.63811 2.54632 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.11921 2.73233 0.30069 2.59698 35 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 3.02516 0.27915 2.68978 2.06255 36 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.64461 1.61008 2.33524 0.45838 37 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.41133 0.31532 2.97533 2.04241 38 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.31963 3.13879 0.23319 2.71280 39 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.53902 1.79533 2.17828 0.44356 40 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.11771 2.73060 0.30132 2.59468 41 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 3.01913 0.27995 2.68740 2.06137 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.53921 1.79534 2.17834 0.44352 43 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 3.01945 0.27991 2.68752 2.06144 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.52405 2.47864 1.47482 2.35173 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 3.01991 0.27985 2.68770 2.06153 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.64069 1.61012 2.33384 0.45902 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 3.02059 0.27976 2.68797 2.06166 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 2.64121 1.61012 2.33403 0.45894 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 3.02161 0.27962 2.68838 2.06186 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 1.12909 2.22023 0.81193 2.08676 51 g - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.11894 2.73201 0.30080 2.59656 52 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 2.54188 1.79547 2.17914 0.44302 53 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 3.02534 0.27913 2.68985 2.06258 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 3.02683 0.27893 2.69044 2.06287 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 3.02864 0.27869 2.69115 2.06323 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 2.64735 1.61004 2.33621 0.45793 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 3.03350 0.27805 2.69306 2.06417 58 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 2.41133 0.31532 2.97533 2.04241 59 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 2.41133 0.31532 2.97533 2.04241 60 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 2.27791 2.30009 2.77872 0.30770 61 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 62 0.23082 2.87791 2.63811 2.54632 62 A - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //