INFERNAL1/a [1.1.4 | Dec 2020] NAME c-di-GMP-II-GCG ACC RF03170 DESC c-di-GMP-II-GCG riboswitch STATES 262 NODES 66 CLEN 86 W 212 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 1 10:33:23 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 33 EFFN 2.727173 CKSUM 2725441014 NULL 0.000 0.000 0.000 0.000 GA 47.90 TC 47.90 NC 47.80 EFP7GF -11.1237 0.71870 ECMLC 0.57870 -5.86262 3.08703 1600000 213039 0.005633 ECMGC 0.36211 -17.39134 -3.00772 1600000 73124 0.005470 ECMLI 0.55075 -4.36965 4.61729 1600000 169330 0.007087 ECMGI 0.38658 -11.30872 1.03566 1600000 47268 0.008462 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 212 373 -9.227 -9.166 -0.105 -5.976 -8.223 -4.394 IL 1 1 2 1 6 1 31 214 375 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 31 214 375 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 117 c g - - MP 3 2 3 7 6 2 35 213 374 -9.143 -9.082 -0.021 -7.858 -8.138 -8.533 -1.029 -1.683 -1.340 1.182 -1.196 -0.977 1.511 -2.023 -1.382 0.997 -2.311 -0.213 1.436 -0.687 0.213 -0.821 ML 4 2 3 7 6 1 28 210 371 -6.478 -6.824 -1.271 -0.996 -6.674 -4.203 0.226 -0.483 0.019 0.139 MR 5 2 3 7 6 1 27 210 371 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 23 208 369 -9.919 -8.618 -1.000 -5.097 -5.114 -1.190 IL 7 7 5 7 6 1 29 212 373 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 30 212 373 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 116 c g - - MP 9 8 6 13 6 2 35 211 372 -9.218 -9.157 -0.020 -7.934 -8.214 -8.609 -1.178 -1.209 -1.378 1.184 -1.518 -1.630 1.735 -2.059 -1.774 1.029 -1.435 -0.140 1.418 -1.262 0.029 -0.979 ML 10 8 6 13 6 1 27 208 369 -6.373 -6.719 -1.433 -0.891 -6.569 -4.098 0.315 -0.573 0.203 -0.102 MR 11 8 6 13 6 1 26 208 369 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 21 203 363 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 29 210 371 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 29 210 371 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 115 c g - - MP 15 14 6 19 6 2 34 209 370 -9.218 -9.157 -0.020 -7.934 -8.214 -8.609 -1.303 -1.861 -1.410 1.452 -1.171 -2.719 1.668 -2.191 -1.933 1.117 -2.502 -0.086 1.398 -2.010 0.400 -1.113 ML 16 14 6 19 6 1 26 206 367 -6.373 -6.719 -1.433 -0.891 -6.569 -4.098 0.627 -0.562 -0.264 -0.081 MR 17 14 6 19 6 1 26 206 367 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 20 201 361 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 28 208 369 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 29 208 369 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 114 c g - - MP 21 20 6 25 6 2 33 207 368 -9.218 -9.157 -0.020 -7.934 -8.214 -8.609 -1.505 -1.481 -1.157 1.148 -1.078 -1.525 1.728 -1.698 -1.282 1.063 -1.670 -0.414 1.387 -1.225 0.092 -0.975 ML 22 20 6 25 6 1 26 205 365 -6.373 -6.719 -1.146 -1.128 -6.569 -4.098 0.216 -0.010 -0.444 0.151 MR 23 20 6 25 6 1 25 204 365 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 20 199 360 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 28 206 367 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 28 206 367 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 113 c g - - MP 27 26 6 31 6 2 32 205 366 -9.227 -9.166 -0.019 -7.943 -8.223 -8.618 -1.314 -1.534 -1.363 1.230 -0.654 -2.577 1.545 -0.661 -1.793 1.170 -2.365 -0.251 1.304 -1.579 0.303 -0.850 ML 28 26 6 31 6 1 25 203 363 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 25 202 363 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 19 197 358 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 27 204 365 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 27 204 365 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 112 c g - - MP 33 32 6 37 6 2 30 203 364 -9.227 -9.166 -0.019 -7.943 -8.223 -8.618 -1.066 -1.367 -1.239 1.250 -0.884 -2.559 1.443 -1.336 -1.776 1.077 -0.374 -0.338 1.342 -1.631 0.168 -0.839 ML 34 32 6 37 6 1 25 201 361 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 24 200 361 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 19 195 356 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 26 202 363 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 27 202 363 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 7 111 c g - - MP 39 38 6 43 6 2 29 201 362 -9.227 -9.166 -0.031 -7.943 -6.491 -8.618 -1.658 -1.829 -2.199 1.356 -1.317 -3.039 1.980 -2.458 -2.255 1.463 -2.812 -0.425 1.349 -2.333 -0.019 -1.378 ML 40 38 6 43 6 1 24 199 359 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 23 198 359 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 18 194 355 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 26 200 361 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 26 200 361 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 8 110 c g - - MP 45 44 6 49 6 2 27 199 360 -9.216 -9.155 -0.020 -7.932 -8.211 -8.606 -1.785 -1.683 -1.973 1.169 -1.657 -1.959 2.122 -2.269 -2.028 1.134 -2.590 -0.488 1.371 -1.492 0.088 -1.194 ML 46 44 6 49 6 1 23 197 358 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 22 197 357 -7.122 -5.851 -1.380 -5.829 -0.963 -4.043 0.287 -0.597 0.258 -0.116 D 48 44 6 49 6 0 18 193 353 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 25 198 359 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 25 198 359 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 9 109 g c - - MP 51 50 6 55 6 2 25 197 358 -9.227 -9.166 -0.019 -7.943 -8.223 -8.618 -2.465 -2.270 -2.580 1.132 -1.346 -3.378 1.443 -2.865 -2.683 2.427 -2.120 -0.407 1.089 -2.671 -0.324 -1.706 ML 52 50 6 55 6 1 22 195 356 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 21 195 355 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 18 191 352 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 23 196 357 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 23 196 357 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 10 108 G C - - MP 57 56 6 61 6 2 23 195 356 -9.227 -9.166 -0.019 -7.943 -8.223 -8.618 -4.376 -2.954 -4.398 0.599 -5.002 -4.595 -0.395 -4.805 -2.437 3.532 -4.567 -0.653 -0.698 -4.158 -2.391 -3.333 ML 58 56 6 61 6 1 21 193 354 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 20 193 354 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 17 191 351 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 22 194 355 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 22 194 355 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 11 107 G C - - MP 63 62 6 67 4 2 21 193 354 -7.243 -3.426 -0.179 -5.864 -4.938 -3.186 -5.044 0.103 -5.827 -4.836 -1.036 -5.412 -4.515 3.668 -4.839 -0.366 -1.331 -4.599 -3.085 -3.924 ML 64 62 6 67 4 1 20 192 353 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 4 1 18 191 352 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 66 62 6 67 4 0 17 190 351 -4.568 -4.250 -2.265 -0.520 IL 67 67 5 67 4 1 21 193 354 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 68 68 6 68 3 1 20 192 353 -1.741 -0.611 -4.442 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 69 68 6 71 3 1 20 191 352 -8.614 -0.078 -4.322 1.160 -0.704 -1.049 -0.581 D 70 68 6 71 3 0 16 189 350 -5.620 -0.734 -1.403 IL 71 71 3 71 3 1 20 191 352 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 105 - a - - MR 72 71 3 74 3 1 19 190 351 -8.552 -0.016 -6.870 0.913 -0.852 -0.251 -0.469 D 73 71 3 74 3 0 14 188 349 -6.893 -0.910 -1.122 IR 74 74 3 74 3 1 18 190 351 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 104 - G - - MR 75 74 3 77 3 1 18 189 350 -8.614 -0.016 -6.931 -2.157 -3.457 1.826 -2.843 D 76 74 3 77 3 0 13 187 347 -6.390 -1.568 -0.620 IR 77 77 3 77 3 1 17 189 350 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 103 - C - - MR 78 77 3 80 3 1 18 188 349 -8.614 -0.016 -6.931 -2.418 1.765 -3.247 -1.698 D 79 77 3 80 3 0 12 186 346 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 17 188 349 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 102 - C - - MR 81 80 3 83 3 1 17 187 348 -8.614 -0.016 -6.931 -2.418 1.765 -3.247 -1.698 D 82 80 3 83 3 0 11 185 345 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 16 187 348 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 101 - C - - MR 84 83 3 86 3 1 16 186 347 -8.614 -0.016 -6.931 -2.418 1.765 -3.247 -1.698 D 85 83 3 86 3 0 10 184 344 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 15 186 347 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 100 - G - - MR 87 86 3 89 3 1 15 185 346 -8.614 -0.016 -6.931 -2.157 -3.457 1.826 -2.843 D 88 86 3 89 3 0 10 183 343 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 14 185 346 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 99 - A - - MR 90 89 3 92 3 1 14 184 345 -8.614 -0.016 -6.931 1.546 -1.370 -1.715 -1.361 D 91 89 3 92 3 0 9 182 342 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 13 184 345 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 98 - G - - MR 93 92 3 95 3 1 14 183 344 -8.614 -0.016 -6.931 -2.157 -3.457 1.826 -2.843 D 94 92 3 95 3 0 8 181 341 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 13 183 344 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 97 - C - - MR 96 95 3 98 3 1 13 182 343 -8.614 -0.016 -6.931 -1.486 1.419 -2.340 -0.374 D 97 95 3 98 3 0 7 180 340 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 12 182 343 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 96 - G - - MR 99 98 3 101 3 1 12 181 342 -8.614 -0.016 -6.931 -2.157 -3.457 1.826 -2.843 D 100 98 3 101 3 0 6 179 340 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 11 181 342 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 95 - G - - MR 102 101 3 104 3 1 11 180 341 -8.614 -0.016 -6.931 -2.157 -3.457 1.826 -2.843 D 103 101 3 104 3 0 6 178 339 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 10 180 341 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 94 - U - - MR 105 104 3 107 3 1 11 179 340 -8.614 -0.016 -6.931 -2.008 -1.915 -2.764 1.739 D 106 104 3 107 3 0 5 177 338 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 10 180 340 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 93 - g - - MR 108 107 3 110 3 1 10 178 339 -8.614 -0.016 -6.931 -0.035 -0.236 0.537 -0.466 D 109 107 3 110 3 0 4 176 337 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 9 179 339 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 92 - A - - MR 111 110 3 113 5 1 9 177 338 -7.337 -0.188 -3.230 -7.364 -8.256 1.815 -2.930 -2.507 -2.530 D 112 110 3 113 5 0 3 175 336 -5.352 -0.707 -2.978 -4.409 -2.404 IR 113 113 3 113 5 1 7 177 338 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 13 91 g c - - MP 114 113 3 118 6 2 10 176 337 -9.151 -9.091 -0.020 -7.867 -8.147 -8.542 -1.962 -0.500 -1.496 1.318 -2.172 -2.933 1.317 -2.482 -2.217 1.996 -2.752 -0.093 1.074 -2.223 -0.153 -0.609 ML 115 113 3 118 6 1 6 175 336 -7.047 -7.394 -0.607 -1.802 -7.243 -4.773 1.202 -1.104 -0.848 -0.558 MR 116 113 3 118 6 1 4 174 335 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 3 118 6 0 1 171 331 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 6 176 336 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 6 175 336 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 14 90 G C - - MP 120 119 6 124 6 2 9 174 335 -9.227 -9.166 -0.019 -7.943 -8.223 -8.618 -5.281 -3.355 -5.451 -0.172 -5.987 -4.897 -1.217 -5.717 -4.661 3.744 -4.964 -1.081 -1.589 -4.816 -3.286 -4.320 ML 121 119 6 124 6 1 4 173 334 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 3 172 333 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 1 170 330 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 6 174 334 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 5 173 334 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 15 89 C G - - MP 126 125 6 130 4 2 7 173 333 -7.243 -7.450 -0.043 -5.864 -4.817 -4.792 -4.453 -0.969 -3.081 -4.819 3.592 -3.920 -4.506 -0.783 -4.745 -2.768 0.644 -4.849 -0.778 -3.327 ML 127 125 6 130 4 1 3 171 332 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 4 1 2 170 331 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 129 125 6 130 4 0 0 169 330 -4.568 -4.250 -2.265 -0.520 IL 130 130 5 130 4 1 5 172 333 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 131 131 6 131 3 1 5 172 333 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 16 - G - - - ML 132 131 6 134 3 1 6 171 331 -8.240 -0.017 -6.894 0.023 -1.574 1.059 -0.822 D 133 131 6 134 3 0 0 168 329 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 4 171 332 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 17 - a - - - ML 135 134 3 137 3 1 5 170 330 -8.240 -0.017 -6.894 0.748 -0.773 -0.773 0.202 D 136 134 3 137 3 0 0 167 328 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 3 170 331 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 18 - u - - - ML 138 137 3 140 3 1 5 169 329 -8.240 -0.017 -6.894 -0.386 -0.443 -0.926 0.980 D 139 137 3 140 3 0 0 166 327 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 3 169 330 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 19 - G - - - ML 141 140 3 143 3 1 4 168 328 -8.240 -0.017 -6.894 -0.801 -2.484 1.576 -1.914 D 142 140 3 143 3 0 0 165 326 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 2 168 329 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 20 - A - - - ML 144 143 3 146 3 1 3 167 327 -8.240 -0.017 -6.894 1.815 -2.930 -2.507 -2.530 D 145 143 3 146 3 0 0 164 325 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 2 167 328 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 21 - u - - - ML 147 146 3 149 3 1 3 166 326 -8.614 -0.016 -6.931 -0.263 0.079 -0.739 0.595 D 148 146 3 149 3 0 0 164 325 -5.620 -0.734 -1.403 IL 149 149 3 149 3 1 1 166 327 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 88 - A - - MR 150 149 3 152 3 1 2 165 325 -8.614 -0.016 -6.931 1.815 -2.930 -2.507 -2.530 D 151 149 3 152 3 0 0 162 323 -6.390 -1.568 -0.620 IR 152 152 3 152 3 1 1 165 326 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 87 - G - - MR 153 152 3 155 3 1 2 164 324 -8.614 -0.016 -6.931 -1.248 -2.196 1.540 -1.146 D 154 152 3 155 3 0 0 161 322 -6.390 -1.568 -0.620 IR 155 155 3 155 3 1 1 164 325 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 86 - g - - MR 156 155 3 158 5 1 1 163 323 -7.337 -0.033 -7.152 -7.364 -8.256 -0.049 -0.315 0.312 -0.017 D 157 155 3 158 5 0 0 160 321 -5.352 -0.707 -2.978 -4.409 -2.404 IR 158 158 3 158 5 1 1 163 323 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 22 85 c g - - MP 159 158 3 163 6 2 2 162 322 -9.227 -9.166 -0.019 -7.943 -8.223 -8.618 -1.998 -2.060 -2.168 1.135 -1.564 -3.000 1.818 -1.792 -1.583 1.795 -2.782 -0.026 1.258 -2.295 -0.156 -1.359 ML 160 158 3 163 6 1 1 159 320 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 3 163 6 1 1 159 320 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 3 163 6 0 0 154 315 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 161 321 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 161 321 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 23 84 C G - - MP 165 164 6 169 6 2 2 160 320 -9.227 -9.166 -0.019 -7.943 -8.223 -8.618 -5.160 -5.117 -4.743 -1.305 -3.341 -5.073 3.703 -4.212 -4.819 -1.137 -5.007 -3.079 0.103 -5.187 -1.068 -3.641 ML 166 164 6 169 6 1 1 157 318 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 157 318 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 153 314 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 159 319 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 159 319 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 24 83 g c - - MP 171 170 6 175 6 2 2 158 318 -9.227 -9.166 -0.019 -7.943 -8.223 -8.618 -3.238 -2.645 -3.254 1.207 -3.091 -4.002 1.397 -3.422 -3.369 2.468 -3.819 -0.458 1.615 -3.309 -0.718 -2.210 ML 172 170 6 175 6 1 1 156 316 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 6 1 1 155 316 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 174 170 6 175 6 0 0 152 313 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 175 175 5 175 6 1 1 157 318 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 176 176 6 176 5 1 1 157 317 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 25 82 C G - - MP 177 176 6 181 6 2 2 156 316 -9.227 -9.166 -0.019 -7.943 -8.223 -8.618 -4.173 -4.123 -3.955 -0.297 -2.728 -4.446 3.172 -3.492 -3.966 -0.090 -4.309 -2.069 1.789 -4.265 -0.387 -2.802 ML 178 176 6 181 6 1 1 154 315 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 179 176 6 181 6 1 1 153 314 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 180 176 6 181 6 0 0 151 312 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 181 181 5 181 6 1 1 155 316 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 182 182 6 182 5 1 1 155 315 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 26 81 G C - - MP 183 182 6 187 6 2 2 154 314 -5.643 -9.166 -0.067 -7.943 -8.223 -5.949 -4.390 -2.955 -4.373 0.661 -4.887 -4.599 0.072 -4.750 -4.248 3.492 -4.576 -0.636 -0.569 -4.151 -2.241 -3.288 ML 184 182 6 187 6 1 1 152 313 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 185 182 6 187 6 1 1 151 312 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 186 182 6 187 6 0 0 151 311 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 187 187 5 187 6 1 1 153 314 -2.837 -3.100 -0.605 -4.755 -5.531 -5.192 0.000 0.000 0.000 0.000 IR 188 188 6 188 5 1 1 153 313 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 28 80 g c - - MP 189 188 6 193 6 2 2 152 312 -9.207 -9.147 -0.087 -4.344 -8.203 -8.598 -2.497 -2.182 -2.601 1.519 -2.674 -3.378 1.321 -2.145 -2.727 2.412 -2.554 -0.152 0.892 -2.668 -0.598 -1.418 ML 190 188 6 193 6 1 1 151 312 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 191 188 6 193 6 1 1 149 309 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 192 188 6 193 6 0 0 150 311 -9.372 -8.070 -3.867 -4.549 -4.567 -0.249 IL 193 193 5 193 6 1 1 151 312 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 194 194 6 194 5 1 1 151 312 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 29 79 c g - - MP 195 194 6 199 6 2 2 150 311 -4.379 -9.080 -0.090 -7.856 -8.136 -8.531 -1.702 -1.665 -2.212 1.112 -1.245 -3.057 2.069 -2.432 -2.256 1.155 -2.815 -0.576 1.709 -2.353 -0.036 -1.371 ML 196 194 6 199 6 1 1 150 310 -6.966 -7.312 -2.027 -1.721 -7.162 -1.217 -0.167 -1.096 0.957 -0.514 MR 197 194 6 199 6 1 1 145 306 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 198 194 6 199 6 0 0 151 311 -9.372 -8.070 -1.894 -4.549 -4.567 -0.642 IL 199 199 5 199 6 1 1 149 310 -3.130 -3.393 -0.473 -5.048 -5.824 -5.485 0.000 0.000 0.000 0.000 IR 200 200 6 200 5 1 1 149 309 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 31 78 c g - - MP 201 200 6 205 4 2 2 148 308 -7.085 -2.220 -0.398 -5.706 -3.034 -2.874 -3.114 0.790 -2.519 -3.919 2.425 -3.045 -3.108 1.362 -3.622 -0.359 1.727 -3.257 -0.062 -2.026 ML 202 200 6 205 4 1 1 139 300 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 203 200 6 205 4 1 1 138 299 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 204 200 6 205 4 0 0 152 313 -5.388 -1.110 -3.085 -1.340 IL 205 205 5 205 4 1 1 149 310 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 206 206 6 206 3 1 1 159 320 -0.165 -3.267 -7.833 0.000 0.000 0.000 0.000 [ MATL 47 ] 32 - a - - - ML 207 206 6 209 3 1 1 36 56 -8.240 -0.017 -6.894 0.273 0.131 -0.346 -0.136 D 208 206 6 209 3 0 0 34 55 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 37 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 33 - g - - - ML 210 209 3 212 3 1 1 35 55 -8.240 -0.017 -6.894 -0.074 -0.488 0.433 -0.019 D 211 209 3 212 3 0 0 33 54 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 36 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 34 - a - - - ML 213 212 3 215 3 1 1 34 54 -8.240 -0.017 -6.894 0.248 -0.309 -0.232 0.205 D 214 212 3 215 3 0 0 32 53 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 35 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 35 - a - - - ML 216 215 3 218 3 1 1 33 53 -8.240 -0.017 -6.894 0.281 -0.102 -0.565 0.236 D 217 215 3 218 3 0 0 31 52 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 34 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 36 - c - - - ML 219 218 3 221 3 1 1 32 52 -8.240 -0.060 -4.730 -0.241 0.493 -0.592 0.115 D 220 218 3 221 3 0 0 30 51 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 33 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 37 - u - - - ML 222 221 3 224 3 1 1 31 51 -8.197 -0.238 -2.751 0.172 0.227 -0.913 0.229 D 223 221 3 224 3 0 0 29 49 -6.583 -2.096 -0.404 IL 224 224 3 224 3 1 1 33 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 38 - u - - - ML 225 224 3 227 3 1 1 30 50 -1.944 -0.454 -6.634 0.188 -0.317 -0.625 0.495 D 226 224 3 227 3 0 0 25 45 -7.684 -0.400 -2.075 IL 227 227 3 227 3 1 1 30 51 -1.290 -0.826 -5.202 0.000 0.000 0.000 0.000 [ MATL 54 ] 42 - C - - - ML 228 227 3 230 3 1 1 25 44 -8.240 -0.017 -6.894 -1.816 1.586 -2.663 -0.845 D 229 227 3 230 3 0 0 24 43 -6.174 -1.687 -0.566 IL 230 230 3 230 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 43 - G - - - ML 231 230 3 233 3 1 1 24 42 -8.240 -0.017 -6.894 -2.157 -3.457 1.826 -2.843 D 232 230 3 233 3 0 0 23 42 -6.174 -1.687 -0.566 IL 233 233 3 233 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 44 - G - - - ML 234 233 3 236 3 1 1 23 41 -8.240 -0.017 -6.894 -2.157 -3.457 1.826 -2.843 D 235 233 3 236 3 0 0 22 41 -6.174 -1.687 -0.566 IL 236 236 3 236 3 1 1 26 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 45 - U - - - ML 237 236 3 239 3 1 1 21 40 -8.240 -0.017 -6.894 -0.819 -0.321 -1.368 1.167 D 238 236 3 239 3 0 0 21 39 -6.174 -1.687 -0.566 IL 239 239 3 239 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 46 - C - - - ML 240 239 3 242 3 1 1 20 39 -8.240 -0.017 -6.894 -2.418 1.765 -3.247 -1.698 D 241 239 3 242 3 0 0 20 38 -6.174 -1.687 -0.566 IL 242 242 3 242 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 47 - G - - - ML 243 242 3 245 3 1 1 19 37 -8.240 -0.017 -6.894 -0.599 -2.344 1.511 -1.775 D 244 242 3 245 3 0 0 18 37 -6.174 -1.687 -0.566 IL 245 245 3 245 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 48 - C - - - ML 246 245 3 248 3 1 1 18 36 -8.240 -0.017 -6.894 -2.418 1.765 -3.247 -1.698 D 247 245 3 248 3 0 0 17 36 -6.174 -1.687 -0.566 IL 248 248 3 248 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 49 - C - - - ML 249 248 3 251 3 1 1 16 35 -8.240 -0.017 -6.894 -1.538 1.450 -2.391 -0.450 D 250 248 3 251 3 0 0 16 35 -6.174 -1.687 -0.566 IL 251 251 3 251 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 50 - u - - - ML 252 251 3 254 3 1 1 15 33 -8.240 -0.017 -6.894 -0.198 0.112 -0.602 0.473 D 253 251 3 254 3 0 0 15 33 -6.174 -1.687 -0.566 IL 254 254 3 254 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 51 - u - - - ML 255 254 3 257 3 1 1 12 24 -2.082 -1.102 -1.746 -0.231 -0.325 0.217 0.248 D 256 254 3 257 3 0 0 9 22 -6.174 -1.687 -0.566 IL 257 257 3 257 3 1 1 12 24 -2.168 -0.428 -4.868 0.000 0.000 0.000 0.000 [ MATL 64 ] 53 - a - - - ML 258 257 3 260 2 1 1 1 1 * 0.000 0.729 -0.603 -0.395 -0.115 D 259 257 3 260 2 0 0 0 0 * 0.000 IL 260 260 3 260 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 65 ] - - - - - - E 261 260 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME c-di-GMP-II-GCG ACC RF03170 DESC c-di-GMP-II-GCG riboswitch LENG 86 MAXL 306 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 1 10:33:23 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED NSEQ 33 EFFN 5.659790 CKSUM 2725441014 STATS LOCAL MSV -9.0203 0.71870 STATS LOCAL VITERBI -9.7927 0.71870 STATS LOCAL FORWARD -3.5709 0.71870 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.61058 1.23780 1.12300 1.68793 1.38629 1.38629 1.38629 1.38629 0.15931 4.49934 1.99396 1.46634 0.26236 0.00000 * 1 1.56210 1.34706 1.58132 1.12516 1 u - - < 1.38629 1.38629 1.38629 1.38629 0.02574 4.36576 4.36576 1.46634 0.26236 0.15125 1.96348 2 1.52587 1.26223 1.49449 1.29032 2 c - - < 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 3 1.35235 1.40555 1.55244 1.25735 3 u - - < 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 4 1.61390 1.17969 1.51978 1.29187 4 c - - < 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 5 1.54551 1.22092 1.51863 1.29891 5 c - - < 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 6 1.45846 1.44010 1.33112 1.32305 6 u - - < 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 7 1.49209 1.18083 1.46451 1.44020 7 c - - < 1.38629 1.38629 1.38629 1.38629 0.04481 4.49934 3.42029 1.46634 0.26236 1.09861 0.40547 8 1.67901 1.00706 1.68954 1.33352 8 c - - < 1.38629 1.38629 1.38629 1.38629 0.02299 4.47752 4.47752 1.46634 0.26236 0.51870 0.90460 9 1.87393 1.70824 0.69328 1.79962 9 g - - < 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 10 2.59789 3.66977 0.13778 3.54760 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 11 3.10424 4.08275 0.08392 3.97505 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 12 0.44177 1.93839 2.39219 2.10588 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 13 1.14389 1.83730 1.18794 1.52635 13 a - - < 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 14 3.15765 4.02378 0.08409 3.89988 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 15 3.78531 0.15038 3.71704 2.37933 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 16 1.46210 2.90350 0.49245 2.27994 16 G - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 17 0.78021 2.07397 2.03822 1.25265 17 a - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 18 1.82291 1.76085 2.12691 0.60268 18 U - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 19 2.21443 3.76759 0.18085 3.40788 19 G - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 20 0.04871 4.34274 3.98121 4.14270 20 A - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 21 1.70611 1.25061 1.94778 0.94287 21 u - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 22 1.77070 1.28439 1.07782 1.54820 22 g - - < 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 23 4.40977 0.07209 4.30663 3.12554 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 24 1.83787 1.91487 0.82013 1.37393 24 g - - < 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 25 3.39830 0.39721 3.19611 1.37256 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 26 2.43026 2.93934 0.19746 3.26303 26 G - - < 1.38629 1.38629 1.38629 1.38629 0.11773 2.77941 3.01618 0.32627 1.27873 1.09861 0.40547 27 1.49513 1.81489 0.77150 1.89308 28 g - - < 1.38629 1.38629 1.38629 1.38629 0.02338 4.46073 4.46073 1.46634 0.26236 1.85737 0.16970 28 1.69075 1.17439 1.51531 1.24872 29 c - - < 1.38629 1.38629 1.38629 1.38629 0.32498 1.98482 1.96575 0.16044 1.90899 0.37421 1.16422 29 2.20560 0.91350 1.60797 1.24339 31 c - - < 1.38629 1.38629 1.38629 1.38629 0.02570 4.36737 4.36737 1.46634 0.26236 0.15272 1.95456 30 1.20462 1.18627 1.61702 1.62786 32 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 31 1.55680 1.74750 0.94199 1.49107 33 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 32 1.21686 1.59375 1.51854 1.26710 34 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 33 1.18259 1.41252 1.81289 1.24895 35 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 34 1.71346 0.89401 1.82425 1.38867 36 c - - _ 1.38629 1.38629 1.38629 1.38629 0.06131 4.49934 3.02928 1.46634 0.26236 1.09861 0.40547 35 1.28031 1.12064 2.15752 1.27166 37 c - - _ 1.38629 1.38629 1.38629 1.38629 0.22619 4.46140 1.65607 1.46634 0.26236 1.84837 0.17137 36 1.25162 1.62231 1.85836 1.02002 38 u - - _ 1.38629 1.38629 1.38629 1.38629 0.46538 1.02713 4.26375 0.62451 0.76685 0.09585 2.39251 37 3.47199 0.15142 4.04880 2.38584 42 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 38 3.74634 4.73583 0.04761 4.26048 43 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 39 3.74634 4.73583 0.04761 4.26048 44 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 40 2.40618 1.65495 2.64258 0.43454 45 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 41 4.10441 0.05957 4.58955 3.46818 46 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 42 2.02050 3.64367 0.21816 3.28990 47 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 43 4.10441 0.05957 4.58955 3.46818 48 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 44 3.17842 0.22960 3.80165 1.95784 49 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 45 1.64461 1.22063 1.82216 1.04927 50 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 46 1.71594 1.60124 1.11222 1.23881 51 g - - _ 1.38629 1.38629 1.38629 1.38629 0.95551 1.18002 1.17729 0.07085 2.68244 1.09861 0.40547 47 0.79650 1.86148 1.69032 1.56450 53 a - - _ 1.38629 1.38629 1.38629 1.38629 0.74489 0.67452 4.14695 2.69323 0.07006 0.06967 2.69858 48 1.43938 1.86510 0.79614 1.85165 78 g - - > 1.38629 1.38629 1.38629 1.38629 0.20302 4.49934 1.75667 1.46634 0.26236 1.09861 0.40547 49 1.27267 1.79939 1.03948 1.60504 79 g - - > 1.38629 1.38629 1.38629 1.38629 0.02687 4.32320 4.32320 1.46634 0.26236 0.36884 1.17616 50 2.18462 0.88266 1.68463 1.24381 80 c - - > 1.38629 1.38629 1.38629 1.38629 0.02338 4.46073 4.46073 1.46634 0.26236 0.37421 1.16422 51 3.49350 0.22504 2.82238 2.19232 81 C - - > 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 52 1.48361 3.35970 0.36275 3.15405 82 G - - > 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 53 1.49272 0.89264 1.76459 1.63779 83 c - - > 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 54 3.41255 4.47540 0.06100 4.21075 84 G - - > 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 55 1.64266 1.30093 1.22246 1.42815 85 g - - > 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 56 1.52782 1.57966 1.04316 1.49341 86 g - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 57 2.88013 3.58295 0.18658 2.45007 87 G - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 58 0.04871 4.34274 3.98121 4.14270 88 A - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 59 2.62593 3.96990 0.12264 3.72268 89 G - - > 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 60 4.38703 0.08021 4.16862 3.01262 90 C - - > 1.38629 1.38629 1.38629 1.38629 0.17927 4.49934 1.87732 1.46634 0.26236 1.09861 0.40547 61 1.86016 1.07185 1.46165 1.30887 91 c - - > 1.38629 1.38629 1.38629 1.38629 0.02625 4.34633 4.34633 1.46634 0.26236 0.13568 2.06455 62 0.04871 4.34274 3.98121 4.14270 92 A - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 63 1.55090 1.49510 0.83165 2.05271 93 g - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 64 3.67869 3.48073 4.22259 0.07333 94 U - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 65 3.74634 4.73583 0.04761 4.26048 95 G - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 66 3.74634 4.73583 0.04761 4.26048 96 G - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 67 3.12276 0.24871 3.75289 1.87920 97 C - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 68 3.74634 4.73583 0.04761 4.26048 98 G - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 69 0.18994 2.53785 3.16392 2.96233 99 A - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 70 3.74634 4.73583 0.04761 4.26048 100 G - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 71 4.10441 0.05957 4.58955 3.46818 101 C - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 72 4.10441 0.05957 4.58955 3.46818 102 C - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 73 4.10441 0.05957 4.58955 3.46818 103 C - - - 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 74 3.74634 4.73583 0.04761 4.26048 104 G - - - 1.38629 1.38629 1.38629 1.38629 0.08170 4.49934 2.69807 1.46634 0.26236 1.09861 0.40547 75 0.64676 2.09261 1.56087 1.94531 105 A - - - 1.38629 1.38629 1.38629 1.38629 0.14412 2.10015 4.44148 0.18240 1.79135 0.28531 1.39343 76 4.09268 0.12790 3.91661 2.48343 107 C - - > 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 77 3.28316 0.17840 3.48436 2.35170 108 C - - > 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 78 1.88726 0.79055 1.58298 1.66306 109 c - - > 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 79 1.60658 1.66891 0.91271 1.56283 110 g - - > 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 80 1.56089 1.58849 1.08260 1.39795 111 g - - > 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 81 1.43453 1.70266 1.11726 1.37674 112 g - - > 1.38629 1.38629 1.38629 1.38629 0.02248 4.49934 4.49934 1.46634 0.26236 1.09861 0.40547 82 1.45706 1.64268 1.23079 1.26742 113 g - - > 1.38629 1.38629 1.38629 1.38629 0.04010 4.49934 3.56862 1.46634 0.26236 1.09861 0.40547 83 1.43291 1.56545 1.08234 1.54369 114 g - - > 1.38629 1.38629 1.38629 1.38629 0.02288 4.48211 4.48211 1.46634 0.26236 1.51212 0.24903 84 1.46620 1.82046 1.14212 1.24444 115 g - - > 1.38629 1.38629 1.38629 1.38629 0.02288 4.48211 4.48211 1.46634 0.26236 1.51212 0.24903 85 1.47604 1.57690 1.09197 1.47276 116 g - - > 1.38629 1.38629 1.38629 1.38629 0.18137 4.48211 1.86713 1.46634 0.26236 1.51212 0.24903 86 1.35684 1.45407 1.27993 1.46597 117 g - - > 1.38629 1.38629 1.38629 1.38629 0.01347 4.31421 * 1.46634 0.26236 0.00000 * //