INFERNAL1/a [1.1.4 | Dec 2020] NAME S15-Flavobacteria ACC RF03161 DESC S15-Flavobacteria ribosomal protein leader STATES 193 NODES 59 CLEN 63 W 168 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 1 10:40:21 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 935 EFFN 4.947071 CKSUM 3963323426 NULL 0.000 0.000 0.000 0.000 GA 46.50 TC 46.50 NC 45.70 EFP7GF -12.9790 0.71888 ECMLC 0.44716 -11.29482 2.97883 1600000 709727 0.001691 ECMGC 0.32883 -17.22038 1.05354 1600000 162823 0.002457 ECMLI 0.43656 -8.60782 5.02097 1600000 460426 0.002606 ECMGI 0.34530 -11.55900 4.70814 1600000 110038 0.003635 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 168 291 -7.841 -8.048 -0.028 -6.462 IL 1 1 2 1 4 1 19 170 293 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 19 170 293 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 19 168 291 -8.809 -0.011 -7.463 -2.799 -2.436 -3.563 1.843 D 4 2 3 5 3 0 13 166 288 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 18 169 292 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 18 167 290 -8.809 -0.011 -7.463 1.897 -3.729 -3.330 -3.295 D 7 5 3 8 3 0 12 165 287 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 17 168 291 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 3 1 17 166 289 -8.809 -0.012 -7.397 -1.170 -0.627 -2.134 1.422 D 10 8 3 11 3 0 12 164 286 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 16 167 290 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - a - - - ML 12 11 3 14 3 1 16 165 288 -8.808 -0.011 -7.463 0.762 0.201 -1.530 -0.307 D 13 11 3 14 3 0 11 163 285 -6.180 -1.693 -0.563 IL 14 14 3 14 3 1 15 166 289 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 1 15 164 287 -6.980 -0.021 -7.283 -3.063 -2.808 -3.844 1.875 D 16 14 3 17 3 0 10 162 285 -6.180 -1.693 -0.563 IL 17 17 3 17 3 1 15 165 288 -1.476 -0.773 -4.176 0.000 0.000 0.000 0.000 [ MATL 6 ] 7 - U - - - ML 18 17 3 20 3 1 15 163 286 -8.807 -0.011 -7.461 -3.061 -2.807 -3.842 1.875 D 19 17 3 20 3 0 9 161 284 -6.198 -1.654 -0.581 IL 20 20 3 20 3 1 14 164 287 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 8 - U - - - ML 21 20 3 23 3 1 14 162 285 -8.808 -0.011 -7.463 -2.819 -2.464 -3.583 1.845 D 22 20 3 23 3 0 9 160 283 -6.180 -1.693 -0.563 IL 23 23 3 23 3 1 13 163 286 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 9 - G - - - ML 24 23 3 26 3 1 13 161 284 -8.808 -0.011 -7.463 -3.011 -4.501 1.912 -3.853 D 25 23 3 26 3 0 8 159 282 -6.180 -1.693 -0.563 IL 26 26 3 26 3 1 12 162 285 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 10 - C - - - ML 27 26 3 29 3 1 12 160 283 -8.808 -0.013 -7.273 -2.972 1.841 -3.639 -2.262 D 28 26 3 29 3 0 7 158 281 -6.180 -1.693 -0.563 IL 29 29 3 29 3 1 11 161 284 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 11 - a - - - ML 30 29 3 32 3 1 11 159 282 -8.807 -0.012 -7.335 0.917 -0.290 -0.572 -0.685 D 31 29 3 32 3 0 6 157 280 -6.199 -1.712 -0.554 IL 32 32 3 32 3 1 10 160 283 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 12 - g - - - ML 33 32 3 35 3 1 10 158 281 -8.807 -0.014 -7.124 -0.333 0.224 0.407 -0.490 D 34 32 3 35 3 0 6 156 279 -6.211 -1.626 -0.594 IL 35 35 3 35 3 1 10 159 282 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - C - - - ML 36 35 3 38 3 1 9 157 280 -8.806 -0.098 -3.976 -0.759 1.116 -0.919 -0.487 D 37 35 3 38 3 0 5 155 278 -6.216 -1.685 -0.566 IL 38 38 3 38 3 1 9 158 281 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 14 - c - - - ML 39 38 3 41 3 1 9 156 279 -2.612 -0.268 -7.390 -0.783 0.729 -1.114 0.378 D 40 38 3 41 3 0 4 154 277 -6.294 -0.415 -2.077 IL 41 41 3 41 3 1 10 160 282 -0.415 -2.052 -6.848 0.000 0.000 0.000 0.000 [ MATR 14 ] - 152 - G - - MR 42 41 3 44 3 1 8 154 277 -9.157 -0.011 -7.475 -2.942 -4.248 1.895 -3.357 D 43 41 3 44 3 0 1 152 275 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 6 154 277 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 151 - U - - MR 45 44 3 47 3 1 7 153 276 -9.157 -0.011 -7.475 -2.285 -2.337 -3.209 1.803 D 46 44 3 47 3 0 0 151 274 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 6 153 276 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 150 - A - - MR 48 47 3 50 3 1 7 152 275 -9.157 -0.011 -7.475 1.878 -3.286 -3.136 -3.216 D 49 47 3 50 3 0 0 150 273 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 5 152 275 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 149 - a - - MR 51 50 3 53 3 1 6 151 274 -9.157 -0.011 -7.475 0.731 0.579 -1.790 -0.844 D 52 50 3 53 3 0 0 149 272 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 4 151 274 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 148 - G - - MR 54 53 3 56 3 1 5 150 273 -9.157 -0.011 -7.475 -2.917 -4.447 1.907 -3.808 D 55 53 3 56 3 0 0 148 271 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 3 151 273 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 147 - G - - MR 57 56 3 59 3 1 5 149 272 -9.157 -0.011 -7.338 -0.123 -2.150 1.325 -1.509 D 58 56 3 59 3 0 0 147 270 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 2 150 272 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 146 - U - - MR 60 59 3 62 3 1 4 148 271 -9.156 -0.011 -7.474 -3.062 -2.808 -3.843 1.875 D 61 59 3 62 3 0 0 146 269 -6.402 -1.545 -0.631 IR 62 62 3 62 3 1 1 149 271 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 145 - U - - MR 63 62 3 65 3 1 3 147 270 -9.157 -0.011 -7.475 -2.785 -2.415 -3.548 1.841 D 64 62 3 65 3 0 0 145 268 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 1 148 270 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 144 - A - - MR 66 65 3 68 3 1 3 146 269 -9.157 -0.011 -7.475 1.662 -2.278 -2.011 -1.388 D 67 65 3 68 3 0 0 144 267 -6.390 -1.568 -0.620 IR 68 68 3 68 3 1 1 147 269 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 143 - U - - MR 69 68 3 71 3 1 2 145 268 -9.157 -0.011 -7.475 -3.064 -2.809 -3.844 1.875 D 70 68 3 71 3 0 0 143 266 -6.390 -1.568 -0.620 IR 71 71 3 71 3 1 1 146 268 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 142 - A - - MR 72 71 3 74 3 1 2 144 267 -9.157 -0.011 -7.388 1.916 -4.016 -3.508 -3.715 D 73 71 3 74 3 0 0 142 265 -6.390 -1.568 -0.620 IR 74 74 3 74 3 1 1 145 267 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 141 - A - - MR 75 74 3 77 3 1 2 143 266 -9.156 -0.011 -7.474 1.899 -3.813 -3.136 -3.536 D 76 74 3 77 3 0 0 141 264 -6.397 -1.554 -0.627 IR 77 77 3 77 3 1 1 144 266 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 140 - U - - MR 78 77 3 80 3 1 1 142 265 -6.151 -0.029 -7.475 -0.611 -0.455 -1.742 1.212 D 79 77 3 80 3 0 0 140 263 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 1 143 265 -1.866 -0.566 -4.317 0.000 0.000 0.000 0.000 [ MATR 27 ] - 137 - A - - MR 81 80 3 83 3 1 1 141 264 -9.157 -0.011 -7.475 1.403 -1.420 -1.643 -0.598 D 82 80 3 83 3 0 0 139 262 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 1 142 264 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 136 - A - - MR 84 83 3 86 3 1 1 140 263 -1.549 -0.616 -7.475 1.682 -2.173 -2.339 -1.430 D 85 83 3 86 3 0 0 138 260 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 1 140 263 -3.479 -0.166 -5.718 0.000 0.000 0.000 0.000 [ MATR 29 ] - 134 - A - - MR 87 86 3 89 3 1 1 139 262 -9.157 -0.011 -7.475 1.802 -2.788 -2.748 -2.196 D 88 86 3 89 3 0 0 137 260 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 1 139 262 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 133 - U - - MR 90 89 3 92 3 1 1 138 261 -4.385 -0.129 -4.734 -0.434 -1.253 -1.584 1.326 D 91 89 3 92 3 0 0 136 259 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 1 138 261 -1.568 -0.676 -4.756 0.000 0.000 0.000 0.000 [ MATR 31 ] - 129 - U - - MR 93 92 3 95 3 1 1 137 260 -9.110 -0.011 -7.428 -2.979 -2.736 -3.758 1.868 D 94 92 3 95 3 0 0 135 258 -6.940 -0.869 -1.170 IR 95 95 3 95 3 1 1 137 260 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 128 - U - - MR 96 95 3 98 3 1 1 136 259 -9.157 -0.011 -7.475 -2.357 -2.377 -3.262 1.811 D 97 95 3 98 3 0 0 133 256 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 136 259 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 127 - A - - MR 99 98 3 101 3 1 1 135 258 -9.157 -0.011 -7.475 1.916 -4.016 -3.508 -3.715 D 100 98 3 101 3 0 0 132 255 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 1 135 258 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 34 ] - 126 - C - - MR 102 101 3 104 3 1 1 134 257 -9.157 -0.011 -7.475 -1.804 1.495 -2.669 -0.440 D 103 101 3 104 3 0 0 132 254 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 1 134 257 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 35 ] - 125 - U - - MR 105 104 3 107 3 1 1 133 256 -9.157 -0.011 -7.475 -2.192 -2.058 -3.052 1.774 D 106 104 3 107 3 0 0 131 253 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 1 133 256 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 124 - A - - MR 108 107 3 110 3 1 1 132 255 -9.157 -0.011 -7.475 1.662 -2.091 -2.286 -1.338 D 109 107 3 110 3 0 0 130 252 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 1 132 255 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 123 - A - - MR 111 110 3 113 3 1 1 131 254 -7.221 -0.019 -7.349 1.830 -3.099 -2.669 -2.558 D 112 110 3 113 3 0 0 129 251 -6.390 -1.568 -0.620 IR 113 113 3 113 3 1 1 131 254 -1.965 -0.536 -4.204 0.000 0.000 0.000 0.000 [ MATR 38 ] - 121 - a - - MR 114 113 3 116 3 1 1 130 253 -9.156 -0.011 -7.474 0.622 -0.473 -1.138 0.363 D 115 113 3 116 3 0 0 128 250 -6.401 -1.547 -0.631 IR 116 116 3 116 3 1 1 130 253 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 120 - A - - MR 117 116 3 119 3 1 1 129 252 -9.157 -0.011 -7.475 1.880 -3.630 -2.832 -3.355 D 118 116 3 119 3 0 0 126 249 -6.390 -1.568 -0.620 IR 119 119 3 119 3 1 1 129 252 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 119 - A - - MR 120 119 3 122 3 1 1 128 251 -9.157 -0.011 -7.475 1.814 -2.730 -2.550 -2.616 D 121 119 3 122 3 0 0 125 248 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 1 128 251 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 118 - U - - MR 123 122 3 125 3 1 1 127 250 -9.157 -0.011 -7.475 -3.064 -2.809 -3.844 1.875 D 124 122 3 125 3 0 0 124 247 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 1 127 250 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 117 - A - - MR 126 125 3 128 3 1 1 126 249 -6.624 -0.023 -7.475 1.904 -3.836 -3.396 -3.450 D 127 125 3 128 3 0 0 123 246 -6.390 -1.568 -0.620 IR 128 128 3 128 3 1 1 126 249 -1.993 -0.524 -4.231 0.000 0.000 0.000 0.000 [ MATR 43 ] - 115 - C - - MR 129 128 3 131 3 1 1 125 248 -9.157 -0.011 -7.475 -3.664 1.898 -4.401 -2.764 D 130 128 3 131 3 0 0 122 244 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 1 125 248 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 44 ] - 114 - A - - MR 132 131 3 134 3 1 1 124 247 -9.157 -0.011 -7.475 1.776 -3.028 -1.731 -2.720 D 133 131 3 134 3 0 0 120 243 -6.390 -1.568 -0.620 IR 134 134 3 134 3 1 1 124 247 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 45 ] - 113 - U - - MR 135 134 3 137 3 1 1 123 246 -9.157 -0.263 -2.601 -1.930 -1.801 -2.722 1.722 D 136 134 3 137 3 0 0 117 239 -6.390 -1.568 -0.620 IR 137 137 3 137 3 1 1 124 247 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 46 ] - 112 - a - - MR 138 137 3 140 5 1 1 123 246 -1.472 -0.676 -7.430 -7.642 -8.534 0.777 -0.864 -0.106 -0.308 D 139 137 3 140 5 0 0 99 222 -6.551 -1.165 -4.178 -5.609 -1.096 IR 140 140 3 140 5 1 1 129 252 -0.216 -2.912 -9.929 -8.097 -9.203 0.000 0.000 0.000 0.000 [ MATP 47 ] 28 74 u a - - MP 141 140 3 145 6 2 2 68 121 -9.422 -9.361 -0.025 -7.604 -7.947 -7.587 -1.849 -1.984 -2.071 0.996 -1.621 -2.888 1.715 -2.302 -2.061 1.169 -2.708 -0.375 1.991 -1.854 0.091 -0.835 ML 142 140 3 145 6 1 1 66 119 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 3 145 6 1 1 65 118 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 3 145 6 0 0 59 112 -10.319 -9.017 -4.814 -5.496 -5.513 -0.124 IL 145 145 5 145 6 1 1 67 120 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 67 120 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 29 73 g c - - MP 147 146 6 151 6 2 2 66 119 -9.414 -9.353 -0.038 -7.940 -8.178 -5.999 -2.762 -2.568 -2.972 1.298 -2.757 -3.793 1.683 -3.193 -3.059 2.193 -3.590 -0.393 1.546 -3.085 -0.469 -1.928 ML 148 146 6 151 6 1 1 64 117 -6.287 -6.634 -1.285 -1.018 -6.483 -4.013 0.398 -0.360 -0.239 0.078 MR 149 146 6 151 6 1 1 63 116 -7.011 -5.740 -1.578 -5.718 -0.852 -3.932 0.371 -0.397 -0.217 0.121 D 150 146 6 151 6 0 0 57 110 -10.356 -9.054 -4.851 -5.533 -5.550 -0.121 IL 151 151 5 151 6 1 1 65 118 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 65 118 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 30 72 a u - - MP 153 152 6 157 6 2 2 64 117 -9.396 -9.335 -0.057 -6.737 -7.688 -5.522 -2.519 -2.366 -2.697 2.097 -2.645 -3.519 1.401 -2.933 -2.784 1.853 -3.329 -0.443 1.160 -2.740 -0.233 -1.500 ML 154 152 6 157 6 1 1 62 115 -6.274 -6.620 -1.318 -0.994 -6.470 -3.999 0.333 -0.376 -0.230 0.159 MR 155 152 6 157 6 1 1 61 114 -6.998 -5.727 -1.604 -5.705 -0.839 -3.919 0.350 -0.380 -0.211 0.128 D 156 152 6 157 6 0 0 55 108 -10.511 -9.209 -5.006 -5.688 -5.706 -0.108 IL 157 157 5 157 6 1 1 63 116 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 63 116 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 31 71 u a - - MP 159 158 6 163 6 2 2 62 115 -9.358 -9.297 -0.052 -7.606 -6.144 -6.241 -2.008 -2.131 -2.073 1.704 -2.085 -3.036 1.506 -2.454 -2.254 1.125 -2.813 -0.589 1.855 -1.584 0.056 -1.127 ML 160 158 6 163 6 1 1 60 113 -6.395 -6.741 -1.208 -1.065 -6.591 -4.120 0.449 -0.459 -0.311 0.139 MR 161 158 6 163 6 1 1 59 112 -7.025 -5.754 -1.580 -5.732 -0.848 -3.946 0.367 -0.366 -0.249 0.127 D 162 158 6 163 6 0 0 52 105 -10.708 -9.406 -5.203 -5.885 -5.903 -0.094 IL 163 163 5 163 6 1 1 61 114 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 61 114 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 32 70 u a - - MP 165 164 6 169 6 2 2 60 113 -9.333 -9.272 -0.042 -7.598 -6.977 -6.363 -2.173 -2.247 -2.206 1.617 -2.170 -3.194 1.556 -2.560 -2.407 1.169 -2.962 -0.594 1.976 -2.308 -0.033 -1.002 ML 166 164 6 169 6 1 1 57 110 -6.324 -6.670 -1.207 -1.079 -6.520 -4.050 0.436 -0.444 -0.244 0.094 MR 167 164 6 169 6 1 1 57 110 -7.201 -5.930 -1.261 -5.908 -1.042 -4.122 0.753 -0.662 -0.346 -0.159 D 168 164 6 169 6 0 0 49 102 -10.805 -9.503 -5.300 -5.982 -5.999 -0.087 IL 169 169 5 169 6 1 1 59 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 59 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 33 69 g c - - MP 171 170 6 175 4 2 2 58 111 -0.960 -5.208 -1.170 -6.095 -2.727 -2.316 -1.965 1.616 -2.966 -3.602 1.103 -3.204 -2.913 2.493 -3.471 -0.245 1.094 -2.883 -0.754 -1.735 ML 172 170 6 175 4 1 1 52 105 -3.498 -3.963 -0.530 -2.693 0.378 -0.443 -0.096 0.041 MR 173 170 6 175 4 1 1 52 105 -3.279 -3.943 -1.810 -0.871 0.232 -0.189 -0.398 0.250 D 174 170 6 175 4 0 0 47 100 -6.335 -3.091 -1.919 -0.723 IL 175 175 5 175 4 1 1 58 111 -0.547 -1.856 -4.773 -8.510 0.000 0.000 0.000 0.000 IR 176 176 6 176 3 1 1 51 103 -0.508 -1.786 -7.183 0.000 0.000 0.000 0.000 [ MATL 53 ] 46 - A - - - ML 177 176 6 179 3 1 1 17 35 -8.630 -0.013 -7.284 1.435 -1.560 -1.203 -0.938 D 178 176 6 179 3 0 0 16 34 -7.730 -2.971 -0.205 IL 179 179 3 179 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 47 - a - - - ML 180 179 3 182 3 1 1 16 34 -8.636 -0.013 -7.290 0.898 -0.912 -0.617 -0.070 D 181 179 3 182 3 0 0 15 33 -7.698 -3.211 -0.173 IL 182 182 3 182 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 48 - A - - - ML 183 182 3 185 3 1 1 14 33 -8.636 -0.215 -2.877 1.188 -1.347 -0.525 -0.659 D 184 182 3 185 3 0 0 13 32 -7.698 -3.211 -0.173 IL 185 185 3 185 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 49 - a - - - ML 186 185 3 188 3 1 1 13 31 -8.436 -0.101 -3.953 0.643 -0.744 -0.002 -0.246 D 187 185 3 188 3 0 0 12 30 -8.433 -3.946 -0.101 IL 188 188 3 188 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 50 - a - - - ML 189 188 3 191 2 1 1 1 1 * 0.000 0.726 -0.429 -0.645 -0.054 D 190 188 3 191 2 0 0 0 0 * 0.000 IL 191 191 3 191 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 58 ] - - - - - - E 192 191 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME S15-Flavobacteria ACC RF03161 DESC S15-Flavobacteria ribosomal protein leader LENG 63 MAXL 223 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 1 10:40:21 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED NSEQ 935 EFFN 6.958714 CKSUM 3963323426 STATS LOCAL MSV -7.5696 0.71888 STATS LOCAL VITERBI -8.7942 0.71888 STATS LOCAL FORWARD -3.3790 0.71888 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.06191 1.78312 1.80929 1.13220 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 0.00000 * 1 3.68090 3.33985 4.20996 0.07849 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 2 0.04903 4.35268 4.07923 4.01409 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 3 2.38393 1.86812 3.12506 0.34325 3 U - - : 1.38629 1.38629 1.38629 1.38629 0.01906 4.67811 4.64745 1.46634 0.26236 1.09861 0.40547 4 0.81753 1.19747 2.63693 1.68770 4 a - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67782 4.67782 1.46634 0.26236 1.10894 0.40034 5 3.93498 3.70856 4.48313 0.05695 5 U - - : 1.38629 1.38629 1.38629 1.38629 0.02599 4.16471 4.59310 0.94555 0.49179 1.10894 0.40034 6 3.93370 3.70741 4.48183 0.05702 7 U - - : 1.38629 1.38629 1.38629 1.38629 0.01879 4.67699 4.67699 1.46634 0.26236 1.05297 0.42909 7 3.69818 3.36658 4.22835 0.07672 8 U - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67782 4.67782 1.46634 0.26236 1.10894 0.40034 8 3.81071 4.91869 0.04222 4.43148 9 G - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67782 4.67782 1.46634 0.26236 1.10894 0.40034 9 3.79118 0.07753 4.16831 3.30908 10 C - - : 1.38629 1.38629 1.38629 1.38629 0.01966 4.67782 4.58816 1.46634 0.26236 1.10894 0.40034 10 0.70358 1.56554 1.81017 2.02050 11 a - - : 1.38629 1.38629 1.38629 1.38629 0.01937 4.67694 4.61771 1.46634 0.26236 1.13941 0.38567 11 1.71084 1.17461 1.03764 1.85753 12 g - - : 1.38629 1.38629 1.38629 1.38629 0.02047 4.67637 4.51466 1.46634 0.26236 1.01480 0.45016 12 2.05133 0.53545 2.05303 1.84715 13 C - - : 1.38629 1.38629 1.38629 1.38629 0.08555 4.67618 2.62174 1.46634 0.26236 1.09964 0.40495 13 2.09083 0.80833 2.22387 1.13127 14 c - - : 1.38629 1.38629 1.38629 1.38629 0.22876 1.63712 4.61140 1.70916 0.19969 0.22462 1.60356 14 1.77081 1.43229 1.55954 0.96546 28 u - - < 1.38629 1.38629 1.38629 1.38629 0.16232 4.67811 1.96230 1.46634 0.26236 1.09861 0.40547 15 1.70011 1.53112 1.05210 1.37897 29 g - - < 1.38629 1.38629 1.38629 1.38629 0.05213 4.53742 3.21664 1.46634 0.26236 2.63782 0.07420 16 1.11496 1.71875 1.30111 1.51162 30 a - - < 1.38629 1.38629 1.38629 1.38629 0.07022 4.51006 2.86799 1.46634 0.26236 2.88139 0.05769 17 1.33264 1.61091 1.70223 1.03779 31 u - - < 1.38629 1.38629 1.38629 1.38629 0.07371 4.46432 2.82104 1.46634 0.26236 2.93086 0.05483 18 1.40099 1.59977 1.68779 1.00301 32 u - - < 1.38629 1.38629 1.38629 1.38629 0.04722 4.41829 3.37948 1.46634 0.26236 2.15357 0.12338 19 1.42860 1.96870 0.84108 1.66350 33 g - - < 1.38629 1.38629 1.38629 1.38629 0.82571 0.59770 4.42285 1.27833 0.32642 0.86440 0.54698 20 0.33377 2.62120 2.33312 2.17091 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02155 4.54124 4.54124 1.46634 0.26236 2.44229 0.09098 21 0.72148 2.08882 1.84414 1.46114 47 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02145 4.54610 4.54610 1.46634 0.26236 2.79128 0.06330 22 0.50613 2.45436 1.77672 1.95145 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.18033 4.54610 1.86821 1.46634 0.26236 2.79128 0.06330 23 0.91488 1.93808 1.36326 1.61129 49 a - - _ 1.38629 1.38629 1.38629 1.38629 0.07749 4.39086 2.77780 1.46634 0.26236 0.89398 0.52598 24 0.84827 1.68897 1.86717 1.45853 50 a - - _ 1.38629 1.38629 1.38629 1.38629 0.81911 0.62754 3.67800 1.41082 0.27964 2.98164 0.05204 25 1.85839 0.93871 1.73234 1.28709 69 c - - > 1.38629 1.38629 1.38629 1.38629 0.05728 4.46397 3.12006 1.46634 0.26236 2.74247 0.06658 26 1.18696 1.84432 1.37894 1.25570 70 a - - > 1.38629 1.38629 1.38629 1.38629 0.03495 4.43706 3.79346 1.46634 0.26236 2.05447 0.13715 27 1.26632 1.79555 1.36589 1.21421 71 u - - > 1.38629 1.38629 1.38629 1.38629 0.02421 4.45388 4.39926 1.46634 0.26236 1.42396 0.27544 28 1.79449 1.42543 1.49308 0.99776 72 u - - > 1.38629 1.38629 1.38629 1.38629 0.02468 4.50897 4.31457 1.46634 0.26236 1.66226 0.21036 29 1.54677 1.16212 1.37967 1.50247 73 c - - > 1.38629 1.38629 1.38629 1.38629 0.02166 4.53644 4.53644 1.46634 0.26236 2.20023 0.11741 30 1.15384 1.71508 1.25004 1.52264 74 a - - > 1.38629 1.38629 1.38629 1.38629 0.68016 0.87390 2.57515 2.34784 0.10046 2.79128 0.06330 31 0.81250 2.03777 1.44436 1.66054 112 a - - : 1.38629 1.38629 1.38629 1.38629 0.02297 4.47832 4.47832 1.46634 0.26236 0.09318 2.41945 32 2.96127 2.82821 3.52618 0.15116 113 U - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 33 0.12366 3.81592 2.68269 3.65266 114 A - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 34 4.35864 0.04643 4.80184 3.71503 115 C - - : 1.38629 1.38629 1.38629 1.38629 0.02853 3.97207 4.67811 0.80203 0.59496 1.09861 0.40547 35 0.04439 4.44429 4.13479 4.15624 117 A - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 36 3.93543 3.70897 4.48359 0.05692 118 U - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 37 0.10123 3.45348 3.39448 3.47110 119 A - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 38 0.05886 4.27577 3.61150 4.11949 120 A - - : 1.38629 1.38629 1.38629 1.38629 0.01936 4.67811 4.61749 1.46634 0.26236 1.09861 0.40547 39 0.92368 1.73767 2.26563 1.12933 121 a - - : 1.38629 1.38629 1.38629 1.38629 0.02454 4.20383 4.67752 0.97776 0.47185 1.05861 0.42608 40 0.08965 3.82164 3.49871 3.39260 123 A - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 41 0.19304 3.02116 3.25294 2.42881 124 A - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 42 3.14421 3.02139 3.77412 0.12193 125 U - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 43 2.90205 0.29524 3.50280 1.76830 126 C - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 44 0.03736 4.60524 4.23211 4.41024 127 A - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 45 3.27624 3.31278 3.95455 0.09800 128 U - - : 1.38629 1.38629 1.38629 1.38629 0.05650 4.67811 3.08703 1.46634 0.26236 1.09861 0.40547 46 3.87753 3.65706 4.42471 0.06027 129 U - - : 1.38629 1.38629 1.38629 1.38629 0.07660 2.74750 4.64109 0.77200 0.62006 0.34175 1.23968 47 1.74535 2.42490 2.63424 0.40773 133 U - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 48 0.10712 3.55154 3.59803 3.08953 134 A - - : 1.38629 1.38629 1.38629 1.38629 0.51997 0.92592 4.67811 0.04629 3.09590 1.09861 0.40547 49 0.18074 3.08266 3.29119 2.49735 136 A - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 50 0.35552 2.51285 2.72631 1.87932 137 A - - : 1.38629 1.38629 1.38629 1.38629 0.03316 3.75856 4.67811 0.86533 0.54630 1.09861 0.40547 51 1.89761 1.72973 2.77947 0.49320 140 U - - : 1.38629 1.38629 1.38629 1.38629 0.01917 4.67811 4.63633 1.46634 0.26236 1.09861 0.40547 52 0.04762 4.42931 3.88569 4.26501 141 A - - : 1.38629 1.38629 1.38629 1.38629 0.01878 4.67771 4.67771 1.46634 0.26236 1.07096 0.41958 53 0.03736 4.60524 4.23211 4.41024 142 A - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 54 3.93543 3.70897 4.48359 0.05692 143 U - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 55 0.19314 3.20672 2.98713 2.46852 144 A - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 56 3.66855 3.32076 4.19685 0.07978 145 U - - : 1.38629 1.38629 1.38629 1.38629 0.01941 4.67811 4.61213 1.46634 0.26236 1.09861 0.40547 57 3.93444 3.70808 4.48259 0.05698 146 U - - : 1.38629 1.38629 1.38629 1.38629 0.01878 4.67747 4.67747 1.46634 0.26236 1.05511 0.42795 58 1.50514 3.08382 0.41560 2.62717 147 G - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 59 3.72463 4.87579 0.04506 4.39751 148 G - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 60 0.83361 0.91579 2.90013 2.20449 149 a - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 61 0.05994 3.92516 3.91380 3.99119 150 A - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 62 3.21739 3.28131 3.91453 0.10268 151 U - - : 1.38629 1.38629 1.38629 1.38629 0.01877 4.67811 4.67811 1.46634 0.26236 1.09861 0.40547 63 3.78775 4.71842 0.05200 3.95810 152 G - - : 1.38629 1.38629 1.38629 1.38629 0.00943 4.66877 * 1.46634 0.26236 0.00000 * //