INFERNAL1/a [1.1.4 | Dec 2020] NAME L31-Gammaproteobacteria ACC RF03157 DESC L31-Gammaproteobacteria ribosomal protein leader STATES 160 NODES 41 CLEN 52 W 177 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 13 13:23:12 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 733 EFFN 28.864895 CKSUM 292809120 NULL 0.000 0.000 0.000 0.000 GA 33.20 TC 33.20 NC 33.10 EFP7GF -24.0693 0.72012 ECMLC 0.53475 -11.39539 0.88809 1600000 854862 0.001404 ECMGC 0.39494 -21.11920 -6.28558 1600000 140057 0.002856 ECMLI 0.63155 -7.64602 2.32771 1600000 652766 0.001838 ECMGI 0.40874 -16.64227 -3.15934 1600000 98967 0.004042 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 177 310 -9.869 -11.115 -0.010 -7.568 IL 1 1 2 1 4 1 15 179 311 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 16 179 311 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 108 - U - - MR 3 2 3 5 3 1 15 178 310 -11.288 -0.002 -9.606 -4.100 -3.388 -4.252 1.924 D 4 2 3 5 3 0 11 175 308 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 15 178 310 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 107 - G - - MR 6 5 3 8 3 1 14 177 309 -11.288 -0.002 -9.606 -5.483 -4.928 1.975 -6.186 D 7 5 3 8 3 0 10 174 307 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 14 177 309 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 106 - G - - MR 9 8 3 11 3 1 13 176 308 -11.288 -0.002 -9.606 -5.680 -7.405 1.987 -6.433 D 10 8 3 11 3 0 9 173 306 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 13 176 308 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 105 - A - - MR 12 11 3 14 3 1 12 175 307 -11.288 -0.002 -9.606 1.981 -6.701 -4.995 -6.328 D 13 11 3 14 3 0 9 172 305 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 12 175 307 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 104 - G - - MR 15 14 3 17 3 1 11 174 306 -1.152 -1.249 -2.952 -0.779 -3.999 1.588 -1.522 D 16 14 3 17 3 0 8 171 304 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 15 174 306 -1.547 -0.611 -8.347 0.000 0.000 0.000 0.000 [ MATR 6 ] - 98 - u - - MR 18 17 3 20 3 1 13 172 305 -11.090 -0.003 -9.408 0.496 -0.740 -2.135 0.818 D 19 17 3 20 3 0 8 170 303 -9.583 -1.230 -0.805 IR 20 20 3 20 3 1 11 172 305 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 97 - a - - MR 21 20 3 23 3 1 12 171 304 -11.180 -0.003 -9.498 0.860 -0.557 -0.990 0.003 D 22 20 3 23 3 0 7 170 302 -8.871 -0.182 -3.101 IR 23 23 3 23 3 1 9 171 304 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 96 - a - - MR 24 23 3 26 3 1 12 170 303 -11.288 -0.002 -9.606 0.572 -0.381 -1.856 0.555 D 25 23 3 26 3 0 4 168 300 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 8 170 303 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 95 - A - - MR 27 26 3 29 3 1 11 169 302 -11.288 -0.002 -9.606 1.601 -1.434 -2.953 -1.098 D 28 26 3 29 3 0 3 167 299 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 7 169 302 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 94 - a - - MR 30 29 3 32 3 1 11 168 301 -11.288 -0.002 -9.606 0.517 -0.526 -0.855 0.403 D 31 29 3 32 3 0 3 166 298 -6.390 -1.568 -0.620 IR 32 32 3 32 3 1 7 168 301 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 93 - U - - MR 33 32 3 35 3 1 10 167 300 -11.288 -0.002 -9.606 -3.678 -0.597 -4.196 1.681 D 34 32 3 35 3 0 3 165 297 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 6 167 300 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 92 - C - - MR 36 35 3 38 3 1 10 166 299 -11.288 -0.002 -9.606 -3.534 1.670 -4.917 -0.519 D 37 35 3 38 3 0 3 164 296 -6.390 -1.568 -0.620 IR 38 38 3 38 3 1 6 166 299 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 91 - C - - MR 39 38 3 41 3 1 9 165 298 -11.288 -0.002 -9.606 -1.081 1.595 -4.522 -1.111 D 40 38 3 41 3 0 3 163 295 -6.390 -1.568 -0.620 IR 41 41 3 41 3 1 5 165 298 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 90 - G - - MR 42 41 3 44 5 1 9 164 297 -9.941 -0.005 -9.757 -9.969 -10.860 -0.952 -5.682 1.780 -5.140 D 43 41 3 44 5 0 2 162 294 -5.352 -0.707 -2.978 -4.409 -2.404 IR 44 44 3 44 5 1 4 164 296 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 1 89 C G - - MP 45 44 3 49 6 2 9 163 296 -11.078 -11.017 -0.005 -9.794 -10.073 -10.469 -7.871 -8.132 -7.201 -1.832 0.349 -7.353 3.795 -6.470 -7.300 -4.319 -7.426 -6.492 -1.569 -7.713 -3.259 -6.101 ML 46 44 3 49 6 1 4 161 293 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 3 49 6 1 4 160 293 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 3 49 6 0 0 156 289 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 4 162 295 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 4 162 294 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 2 88 G C - - MP 51 50 6 55 6 2 9 161 294 -11.078 -11.017 -0.005 -9.794 -10.073 -10.469 -6.403 -4.819 -6.381 1.799 -7.632 -6.724 -2.696 -6.883 -6.261 3.531 -6.598 -1.447 -1.959 -6.210 -4.715 -5.259 ML 52 50 6 55 6 1 4 159 291 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 4 159 291 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 155 287 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 4 160 293 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 4 160 293 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 3 87 U A - - MP 57 56 6 61 6 2 8 159 292 -11.078 -11.017 -0.005 -9.794 -10.073 -10.469 -7.832 -8.075 -7.179 -4.275 -5.545 -7.342 1.486 -6.453 -7.273 -4.225 -7.407 -6.392 3.573 -7.683 0.125 -6.072 ML 58 56 6 61 6 1 3 157 290 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 3 157 289 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 154 286 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 4 158 291 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 4 158 291 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 4 86 G C - - MP 63 62 6 67 6 2 7 157 290 -11.078 -11.017 -0.005 -9.794 -10.073 -10.469 -5.441 -4.066 -5.283 2.199 -6.438 -5.901 -1.511 -5.934 -5.644 3.283 -5.918 -1.284 -1.245 -5.166 -2.195 -4.230 ML 64 62 6 67 6 1 3 156 288 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 2 155 288 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 153 285 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 4 156 289 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 4 156 289 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 5 85 U A - - MP 69 68 6 73 4 2 6 155 288 -10.061 -10.268 -0.006 -8.682 -7.813 -8.045 -3.010 -4.236 -5.539 -7.338 1.290 -6.445 -7.261 -4.181 -7.399 -6.338 3.698 -7.669 -1.994 -6.058 ML 70 68 6 73 4 1 2 154 287 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 4 1 1 153 286 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 72 68 6 73 4 0 0 152 285 -4.568 -4.250 -2.265 -0.520 IL 73 73 5 73 4 1 4 155 287 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 74 74 6 74 3 1 3 155 287 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 6 - G - - - ML 75 74 6 77 3 1 5 153 286 -11.288 -0.002 -9.606 -5.680 -7.405 1.987 -6.433 D 76 74 6 77 3 0 0 151 284 -5.620 -0.734 -1.403 IL 77 77 3 77 3 1 2 153 286 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 84 - G - - MR 78 77 3 80 5 1 4 152 285 -9.941 -0.005 -9.757 -9.969 -10.860 -5.680 -7.405 1.987 -6.433 D 79 77 3 80 5 0 0 150 283 -5.352 -0.707 -2.978 -4.409 -2.404 IR 80 80 3 80 5 1 1 152 285 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 7 83 G C - - MP 81 80 3 85 6 2 5 151 284 -11.078 -11.017 -0.005 -9.794 -10.073 -10.469 -8.922 -5.647 -10.851 -3.084 -10.511 -6.837 -4.907 -10.450 -7.008 3.971 -7.211 -3.563 -5.272 -7.292 -7.325 -9.786 ML 82 80 3 85 6 1 1 150 282 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 3 85 6 1 1 149 282 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 3 85 6 0 0 147 279 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 150 283 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 150 283 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 8 82 U G - - MP 87 86 6 91 4 2 3 149 282 -10.061 -10.268 -0.006 -8.682 -7.892 -8.156 -7.213 -4.394 -5.568 -7.362 0.834 -6.481 -7.315 -4.371 -3.923 -6.530 -2.300 -7.732 3.783 -6.118 ML 88 86 6 91 4 1 1 148 281 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 4 1 1 148 280 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 90 86 6 91 4 0 0 146 279 -4.568 -4.250 -2.265 -0.520 IL 91 91 5 91 4 1 1 149 281 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 92 92 6 92 3 1 1 149 281 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 9 - G - - - ML 93 92 6 95 3 1 1 147 280 -10.983 -0.461 -1.872 -0.978 -4.045 1.626 -1.535 D 94 92 6 95 3 0 0 146 278 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 1 148 280 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 10 - U - - - ML 96 95 3 98 3 1 1 146 279 -10.835 -0.003 -9.153 -3.264 -0.090 -3.153 1.508 D 97 95 3 98 3 0 0 145 278 -9.364 -0.044 -5.147 IL 98 98 3 98 3 1 1 147 279 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 81 - A - - MR 99 98 3 101 3 1 1 145 278 -11.288 -0.002 -9.606 1.719 -4.919 -0.706 -4.036 D 100 98 3 101 3 0 0 143 275 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 1 146 278 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 80 - U - - MR 102 101 3 104 3 1 1 144 277 -11.288 -0.002 -9.606 -3.090 -1.946 -0.505 1.545 D 103 101 3 104 3 0 0 142 275 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 1 145 277 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 79 - A - - MR 105 104 3 107 5 1 1 143 276 -6.606 -0.135 -9.757 -9.969 -3.695 1.675 -4.864 -0.517 -3.774 D 106 104 3 107 5 0 0 141 274 -5.352 -0.707 -2.978 -4.409 -2.404 IR 107 107 3 107 5 1 1 144 276 -2.655 -0.406 -6.167 -4.334 -5.440 0.000 0.000 0.000 0.000 [ MATP 29 ] 11 77 C G - - MP 108 107 3 112 6 2 2 143 275 -10.979 -10.918 -0.008 -9.695 -8.443 -10.370 -5.331 -5.061 -5.339 -0.287 -4.244 -6.177 3.128 -4.890 -5.209 -0.579 -5.723 -0.201 1.857 -5.521 -0.403 -1.858 ML 109 107 3 112 6 1 1 140 273 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 3 112 6 1 1 140 273 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 3 112 6 0 0 133 266 -11.482 -10.180 -5.977 -6.659 -6.677 -0.054 IL 112 112 5 112 6 1 1 142 274 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 142 274 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 12 76 c g - - MP 114 113 6 118 6 2 2 141 273 -10.976 -10.915 -0.006 -9.692 -9.972 -10.367 -4.043 -4.086 -4.179 0.435 -3.702 -5.029 2.504 -4.005 -4.175 -0.264 -2.655 -1.557 2.291 -2.773 0.984 -2.146 ML 115 113 6 118 6 1 1 138 271 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 139 271 -7.098 -5.827 -1.419 -5.805 -0.939 -4.019 0.212 -0.003 -0.449 0.151 D 117 113 6 118 6 0 0 133 265 -11.482 -10.180 -5.977 -6.659 -6.677 -0.054 IL 118 118 5 118 6 1 1 140 272 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 140 272 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 13 75 g c - - MP 120 119 6 124 6 2 2 139 271 -10.979 -10.918 -0.025 -9.695 -7.000 -7.076 -4.109 -3.719 -4.772 1.465 -5.644 -5.403 0.145 -5.398 -5.147 2.816 -1.364 1.378 -0.639 -4.666 -0.144 -1.977 ML 121 119 6 124 6 1 1 136 269 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 137 269 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 132 265 -11.482 -10.180 -5.977 -6.659 -6.677 -0.054 IL 124 124 5 124 6 1 1 138 270 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 138 270 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 14 74 g c - - MP 126 125 6 130 6 2 2 137 269 -10.959 -10.899 -0.540 -9.675 -2.194 -3.452 -5.122 -3.775 -4.947 1.541 -6.025 -5.553 -0.819 -5.615 -5.370 2.685 -5.625 1.889 0.880 -4.811 -2.249 -3.908 ML 127 125 6 130 6 1 1 134 266 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 136 268 -7.353 -6.082 -1.708 -6.060 -0.722 -4.274 -0.035 0.429 -0.734 0.107 D 129 125 6 130 6 0 0 132 265 -11.588 -10.286 -6.083 -6.766 -6.783 -0.050 IL 130 130 5 130 6 1 1 136 269 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 136 269 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 15 73 c g - - MP 132 131 6 136 6 2 2 135 268 -10.431 -3.113 -0.528 -9.147 -5.797 -2.551 -2.120 -2.462 -2.450 1.350 0.012 -2.819 1.714 -0.169 -2.516 1.485 -3.089 -0.481 1.098 -2.369 0.120 -1.713 ML 133 131 6 136 6 1 1 130 263 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 135 267 -10.351 -2.168 -0.740 -9.058 -2.810 -4.909 1.189 -1.267 -0.795 -0.459 D 135 131 6 136 6 0 0 132 265 -12.554 -6.485 -1.063 -7.731 -7.748 -0.998 IL 136 136 5 136 6 1 1 134 267 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 134 267 -4.382 -0.111 -7.893 -6.060 -7.166 0.000 0.000 0.000 0.000 [ MATP 34 ] 16 71 C G - - MP 138 137 6 142 4 2 2 133 266 -1.332 -2.145 -1.422 -8.249 -6.394 -6.273 -6.121 -2.202 -4.731 -6.602 3.518 -5.521 -6.088 -0.113 -6.424 -4.021 1.112 -6.448 -0.010 -4.843 ML 139 137 6 142 4 1 1 120 253 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 4 1 1 136 268 -0.671 -5.213 -3.080 -2.141 -0.836 -1.921 1.471 -1.306 D 141 137 6 142 4 0 0 131 263 -1.471 -1.241 -2.634 -4.182 IL 142 142 5 142 4 1 1 138 270 -0.207 -2.947 -8.059 -11.796 0.000 0.000 0.000 0.000 IR 143 143 6 143 3 1 1 116 243 -0.209 -2.897 -10.776 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - u - - - ML 144 143 6 146 3 1 1 15 34 -10.983 -0.003 -9.637 -0.206 -1.668 0.255 0.700 D 145 143 6 146 3 0 0 16 35 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - u - - - ML 147 146 3 149 3 1 1 14 32 -10.983 -0.003 -9.637 0.273 -0.705 -0.815 0.687 D 148 146 3 149 3 0 0 15 34 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - a - - - ML 150 149 3 152 3 1 1 13 31 -10.983 -0.182 -3.086 0.565 -0.492 -0.732 0.272 D 151 149 3 152 3 0 0 14 33 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 18 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - A - - - ML 153 152 3 155 3 1 1 11 30 -10.804 -0.482 -1.819 1.084 -1.890 -0.398 -0.233 D 154 152 3 155 3 0 0 11 29 -9.457 -4.970 -0.049 IL 155 155 3 155 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - g - - - ML 156 155 3 158 2 1 1 1 1 * 0.000 0.334 -1.288 0.798 -0.757 D 157 155 3 158 2 0 0 0 0 * 0.000 IL 158 158 3 158 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 40 ] - - - - - - E 159 158 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME L31-Gammaproteobacteria ACC RF03157 DESC L31-Gammaproteobacteria ribosomal protein leader LENG 52 MAXL 177 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 13 13:23:12 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED NSEQ 733 EFFN 256.691498 CKSUM 292809120 STATS LOCAL MSV -7.4208 0.72012 STATS LOCAL VITERBI -8.1920 0.72012 STATS LOCAL FORWARD -3.8052 0.72012 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.48433 1.58115 1.12192 1.41901 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 0.00000 * 1 4.14716 0.02785 7.47614 4.50213 1 C - - < 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 2 1.45966 7.64443 0.27817 4.60162 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 3 7.49631 1.83060 7.43684 0.17609 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 4 1.14167 6.60679 0.42091 3.77584 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 5 4.79138 1.98968 7.42099 0.15740 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 6 7.34361 8.57114 0.00122 7.86930 6 G - - - 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 7 6.68777 7.80838 0.00204 7.86305 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 8 7.51876 2.36847 5.39480 0.10392 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 9 2.11400 6.40094 0.22986 2.48961 9 G - - - 1.38629 1.38629 1.38629 1.38629 0.34085 8.90273 1.24237 1.46634 0.26236 1.09861 0.40547 10 5.77339 1.37281 3.96478 0.32224 10 U - - - 1.38629 1.38629 1.38629 1.38629 0.00038 8.56226 8.56226 1.46634 0.26236 0.33911 1.24620 11 3.52324 0.48137 2.65787 1.26421 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.00269 8.81626 5.97673 1.46634 0.26236 6.41674 0.00164 12 2.72761 0.94623 3.19949 0.68193 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.00030 8.81387 8.81387 1.46634 0.26236 3.60318 0.02761 13 1.75817 2.84762 0.41367 2.22157 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.01759 8.81626 4.05781 1.46634 0.26236 6.41674 0.00164 14 1.70051 4.27679 0.40845 1.97443 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.50032 8.79897 0.93264 1.46634 0.26236 3.86684 0.02115 15 1.76116 0.88351 1.39230 1.79384 15 c - - < 1.38629 1.38629 1.38629 1.38629 0.09961 8.30268 2.35848 1.46634 0.26236 0.22828 1.58913 16 6.90960 0.26116 2.99933 1.72024 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.71650 0.67064 8.74763 2.00746 0.14425 0.00189 6.27214 17 1.63362 2.98584 1.13000 0.84107 36 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 18 1.19931 1.94723 2.03700 0.85447 37 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 19 0.95189 1.74937 1.95967 1.20664 38 a - - _ 1.38629 1.38629 1.38629 1.38629 0.13234 8.90273 2.08891 1.46634 0.26236 1.09861 0.40547 20 0.55435 3.28122 1.64648 1.63350 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.08103 8.77070 2.55518 1.46634 0.26236 1.58667 0.22892 21 1.10970 2.50156 0.73727 2.20757 40 g - - _ 1.38629 1.38629 1.38629 1.38629 2.12497 0.17894 3.11430 1.99559 0.14611 0.00163 6.41846 22 2.16088 3.05195 0.17885 6.66381 71 G - - > 1.38629 1.38629 1.38629 1.38629 0.44694 1.83041 1.60909 0.00176 6.34300 0.00732 4.92064 23 1.05103 1.76552 1.44991 1.40759 73 a - - > 1.38629 1.38629 1.38629 1.38629 0.00034 8.68885 8.68885 1.46634 0.26236 0.63662 0.75306 24 2.05107 0.96634 3.76496 0.75980 74 u - - > 1.38629 1.38629 1.38629 1.38629 0.00030 8.80776 8.80776 1.46634 0.26236 2.44409 0.09081 25 3.62791 0.83344 1.84640 0.96477 75 c - - > 1.38629 1.38629 1.38629 1.38629 0.00030 8.81626 8.81626 1.46634 0.26236 6.41674 0.00164 26 1.07005 3.60336 0.61550 2.41457 76 G - - > 1.38629 1.38629 1.38629 1.38629 0.00030 8.81626 8.81626 1.46634 0.26236 6.41674 0.00164 27 1.48992 4.56471 0.41959 2.23604 77 G - - > 1.38629 1.38629 1.38629 1.38629 0.01125 4.50601 8.81626 0.02665 3.63837 0.00327 5.72359 28 0.20628 7.13823 1.74678 4.48562 79 A - - - 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 29 4.52679 2.89398 1.61181 0.30883 80 U - - - 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 30 0.17503 7.15874 1.88690 4.79775 81 A - - - 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 31 6.31214 7.59176 0.00300 7.29759 82 G - - > 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 32 7.94306 0.00254 7.76052 6.34226 83 C - - > 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 33 7.34361 8.57114 0.00122 7.86930 84 G - - - 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 34 0.16941 7.55315 1.86688 7.25824 85 A - - > 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 35 4.43415 0.43539 4.39392 1.11240 86 C - - > 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 36 0.25752 7.57401 1.48795 7.27990 87 A - - > 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 37 4.60953 0.29718 7.48670 1.40011 88 C - - > 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 38 2.37606 7.62245 0.11580 4.13864 89 G - - > 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 39 1.97476 8.29040 0.15023 7.71982 90 G - - : 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 40 2.12995 0.24055 6.65758 2.36794 91 C - - : 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 41 4.77565 0.20515 6.96111 1.73675 92 C - - : 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 42 5.25403 1.73580 5.19592 0.20705 93 U - - : 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 43 0.99158 1.78141 2.07657 1.09289 94 a - - : 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 44 0.24469 2.43997 3.95117 2.20134 95 A - - : 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 45 0.94448 1.66468 3.20528 0.96411 96 a - - : 1.38629 1.38629 1.38629 1.38629 0.08053 8.90273 2.56088 1.46634 0.26236 1.09861 0.40547 46 0.71151 1.80591 2.20947 1.44811 97 a - - : 1.38629 1.38629 1.38629 1.38629 0.06741 8.82249 2.73270 1.46634 0.26236 6.34536 0.00176 47 0.99622 1.99629 3.73648 0.75279 98 u - - : 1.38629 1.38629 1.38629 1.38629 0.81671 0.58347 8.75540 0.42616 1.05847 0.00198 6.22473 48 1.95089 6.34594 0.25746 2.48783 104 G - - : 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 49 0.00674 8.28512 5.10213 7.86662 105 A - - : 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 50 7.34361 8.57114 0.00122 7.86930 106 G - - : 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 51 7.35388 4.83208 0.00904 7.86076 107 G - - : 1.38629 1.38629 1.38629 1.38629 0.00027 8.90273 8.90273 1.46634 0.26236 1.09861 0.40547 52 6.26347 4.48760 5.08401 0.01954 108 U - - : 1.38629 1.38629 1.38629 1.38629 0.00014 8.90259 * 1.46634 0.26236 0.00000 * //