INFERNAL1/a [1.1.4 | Dec 2020] NAME S4-Fusobacteriales ACC RF03133 DESC S4-Fusobacteriales ribosomal protein leader STATES 195 NODES 50 CLEN 62 W 143 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 1 10:33:30 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 84 EFFN 4.027222 CKSUM 3176472191 NULL 0.000 0.000 0.000 0.000 GA 48.80 TC 48.80 NC 38.30 EFP7GF -13.3749 0.71915 ECMLC 0.58511 -6.54905 3.78588 1600000 507431 0.002365 ECMGC 0.41918 -15.30804 -2.23003 1600000 96130 0.004161 ECMLI 0.58072 -4.95412 4.92607 1600000 372404 0.003222 ECMGI 0.43527 -10.17395 1.59492 1600000 67110 0.005960 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 143 252 -7.622 -7.829 -0.033 -6.243 IL 1 1 2 1 4 2 23 145 255 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 2 22 144 254 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - c - - - ML 3 2 3 5 3 2 23 143 253 -8.600 -0.013 -7.254 -1.345 0.943 -2.214 0.554 D 4 2 3 5 3 0 17 140 250 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 21 143 253 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 2 22 142 252 -8.600 -0.013 -7.254 -1.737 -1.755 -2.081 1.663 D 7 5 3 8 3 0 16 139 249 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 21 142 252 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 2 21 141 251 -8.600 -0.013 -7.254 -2.286 -3.449 1.815 -2.441 D 10 8 3 11 3 0 15 138 248 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 20 141 251 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 2 20 140 250 -8.600 -0.013 -7.254 -2.690 -2.488 -3.463 1.838 D 13 11 3 14 3 0 15 137 247 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 19 140 250 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 2 20 139 249 -8.600 -0.013 -7.254 1.890 -3.634 -3.151 -3.304 D 16 14 3 17 3 0 14 137 246 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 18 139 249 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 2 19 138 248 -8.600 -0.013 -7.254 1.890 -3.634 -3.151 -3.304 D 19 17 3 20 3 0 13 136 246 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 18 138 248 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 18 137 247 -8.956 -0.012 -7.274 1.890 -3.634 -3.151 -3.304 D 22 20 3 23 3 0 13 135 245 -5.620 -0.734 -1.403 IL 23 23 3 23 3 1 16 137 247 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 103 - A - - MR 24 23 3 26 3 1 17 136 246 -8.956 -0.012 -7.274 1.800 -3.000 -2.089 -2.671 D 25 23 3 26 3 0 11 133 243 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 16 136 246 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 102 - A - - MR 27 26 3 29 3 1 17 135 245 -4.901 -0.059 -7.274 1.890 -3.634 -3.151 -3.304 D 28 26 3 29 3 0 10 132 242 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 15 135 245 -1.767 -0.595 -4.502 0.000 0.000 0.000 0.000 [ MATR 10 ] - 99 - G - - MR 30 29 3 32 3 1 16 134 244 -8.956 -0.012 -7.274 -2.835 -4.208 1.896 -3.570 D 31 29 3 32 3 0 10 131 241 -6.390 -1.568 -0.620 IR 32 32 3 32 3 1 14 134 244 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 98 - a - - MR 33 32 3 35 3 1 16 133 243 -8.956 -0.012 -7.274 0.527 -1.067 0.069 0.047 D 34 32 3 35 3 0 9 131 240 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 13 133 243 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 97 - A - - MR 36 35 3 38 3 1 15 132 242 -8.956 -0.012 -7.274 1.890 -3.634 -3.151 -3.304 D 37 35 3 38 3 0 9 130 239 -6.390 -1.568 -0.620 IR 38 38 3 38 3 1 13 132 242 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 96 - G - - MR 39 38 3 41 5 1 15 131 241 -5.572 -0.050 -7.477 -7.689 -8.581 -2.835 -4.208 1.896 -3.570 D 40 38 3 41 5 0 8 129 238 -5.352 -0.707 -2.978 -4.409 -2.404 IR 41 41 3 41 5 1 12 131 241 -2.151 -0.547 -6.101 -4.269 -5.374 0.000 0.000 0.000 0.000 [ MATP 14 ] 8 93 G C - - MP 42 41 3 46 6 2 15 130 240 -9.403 -9.342 -0.017 -8.119 -8.399 -8.794 -4.415 -2.981 -4.411 0.731 -5.463 -4.976 -0.701 -4.836 -4.329 3.260 -4.713 1.546 -0.950 -4.375 -2.696 -3.279 ML 43 41 3 46 6 1 10 128 237 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 3 46 6 1 10 127 237 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 3 46 6 0 6 123 233 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 11 129 239 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 11 129 239 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 9 92 A U - - MP 48 47 6 52 6 2 15 128 238 -9.403 -9.342 -0.017 -8.119 -8.399 -8.794 -4.077 -2.937 -4.173 3.199 -5.172 -5.720 -0.788 -4.372 -4.008 1.579 -4.574 0.984 -0.981 -4.714 -2.687 -2.953 ML 49 47 6 52 6 1 9 126 235 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 9 125 235 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 6 121 231 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 11 127 237 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 11 127 237 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 10 91 u a - - MP 54 53 6 58 6 2 13 126 236 -9.403 -7.088 -0.026 -8.119 -8.399 -8.794 -4.109 -4.078 -3.999 -0.277 -2.911 -4.590 2.215 -3.626 -3.992 -0.110 -4.396 -2.039 2.767 -4.261 0.862 -2.854 ML 55 53 6 58 6 1 9 124 234 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 9 124 233 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 6 120 230 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 10 125 235 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 10 125 235 -2.468 -0.472 -5.980 -4.147 -5.253 0.000 0.000 0.000 0.000 [ MATP 17 ] 11 89 A U - - MP 60 59 6 64 6 2 12 124 234 -9.403 -9.342 -0.017 -8.119 -8.399 -8.794 -5.015 -3.805 -4.856 3.773 -5.926 -7.163 -1.547 -4.816 -4.806 -0.261 -5.407 -1.136 -1.946 -6.082 -3.477 -3.693 ML 61 59 6 64 6 1 9 122 232 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 8 122 232 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 5 119 228 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 10 123 233 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 10 123 233 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 12 88 U A - - MP 66 65 6 70 6 2 10 122 232 -9.403 -9.342 -0.026 -6.732 -8.399 -8.794 -5.904 -5.749 -5.538 -1.970 -4.185 -5.941 0.144 -4.976 -5.533 -1.893 -5.825 -3.611 3.779 -5.960 -1.821 -4.086 ML 67 65 6 70 6 1 8 120 230 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 8 120 230 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 5 118 227 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 9 121 231 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 9 121 231 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 13 87 G C - - MP 72 71 6 76 4 2 8 120 230 -2.955 -8.723 -0.250 -5.177 -5.220 -3.383 -5.329 0.390 -6.274 -5.040 -1.381 -5.731 -4.753 3.701 -5.064 -0.932 -1.662 -4.830 -3.442 -4.204 ML 73 71 6 76 4 1 7 119 229 -2.673 -4.796 -0.979 -1.738 0.308 -0.579 0.218 -0.105 MR 74 71 6 76 4 1 7 119 229 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 75 71 6 76 4 0 5 117 227 -12.737 -14.007 -2.036 -0.404 IL 76 76 5 76 4 1 7 119 229 -3.550 -5.052 -0.337 -3.431 0.000 0.000 0.000 0.000 IR 77 77 6 77 3 1 7 119 229 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 86 - G - - MR 78 77 6 80 2 1 6 118 228 -9.092 -0.003 0.088 -1.703 1.109 -1.082 D 79 77 6 80 2 0 5 117 227 -4.432 -0.068 IR 80 80 3 80 2 1 6 118 228 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 21 ] - - - - - - B 81 80 3 82 135 0 5 117 227 [ BEGL 22 ] - - - - - - S 82 81 1 83 4 0 0 31 49 -0.034 -7.213 -6.620 -7.260 [ MATP 23 ] 15 34 u a - - MP 83 82 1 87 6 2 2 31 49 -9.403 -9.342 -0.086 -6.505 -5.080 -6.158 -2.234 -2.331 -2.402 0.939 -2.200 -3.243 1.621 -2.618 -2.445 0.949 -3.002 0.528 2.011 -2.165 0.614 -1.138 ML 84 82 1 87 6 1 1 30 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 85 82 1 87 6 1 1 30 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 86 82 1 87 6 0 0 28 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 87 87 5 87 6 1 1 31 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 88 88 6 88 5 1 1 31 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 16 33 u a - - MP 89 88 6 93 6 2 2 29 47 -2.916 -9.275 -0.223 -8.051 -8.331 -8.726 -2.030 -2.167 -2.206 1.064 -2.059 -3.051 1.523 -2.461 -2.257 0.950 -2.343 -0.537 1.794 -2.348 0.512 0.758 ML 90 88 6 93 6 1 1 28 46 -6.415 -6.761 -1.097 -1.170 -6.611 -4.140 0.165 -0.367 -0.419 0.439 MR 91 88 6 93 6 1 1 28 46 -1.839 -6.178 -2.087 -6.156 -1.290 -4.370 -0.145 -0.474 -0.760 0.836 D 92 88 6 93 6 0 0 26 44 -9.364 -8.062 -1.915 -4.542 -4.559 -0.634 IL 93 93 5 93 6 1 1 28 46 -4.078 -4.341 -0.226 -5.996 -6.772 -6.433 0.000 0.000 0.000 0.000 IR 94 94 6 94 5 1 1 28 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 18 32 G C - - MP 95 94 6 99 4 2 2 27 45 -7.622 -4.758 -0.659 -1.622 -3.892 -2.649 -3.802 1.420 -4.658 -4.466 0.038 -4.331 -4.038 3.058 -4.377 0.937 0.036 -3.744 -1.945 -2.745 ML 96 94 6 99 4 1 1 27 45 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 97 94 6 99 4 1 1 27 45 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 98 94 6 99 4 0 0 26 44 -4.568 -4.250 -2.265 -0.520 IL 99 99 5 99 4 1 1 29 47 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 100 100 6 100 3 1 1 27 45 -1.595 -0.694 -4.295 0.000 0.000 0.000 0.000 [ MATL 26 ] 19 - A - - - ML 101 100 6 103 5 1 1 24 42 -7.204 -0.056 -5.592 -7.232 -8.123 1.387 -1.516 -1.059 -0.851 D 102 100 6 103 5 0 0 23 41 -6.726 -0.193 -5.987 -4.362 -4.275 IL 103 103 3 103 5 1 1 25 43 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 20 30 G C - - MP 104 103 3 108 6 2 2 23 41 -9.395 -9.334 -0.017 -8.111 -8.391 -8.786 -4.106 -2.822 -4.025 0.725 -4.641 -4.507 0.825 -4.493 -4.171 3.282 -4.492 0.092 -0.257 -3.887 -1.957 -2.963 ML 105 103 3 108 6 1 1 22 40 -6.372 -6.718 -1.147 -1.127 -6.568 -4.097 0.211 -0.364 -0.368 0.368 MR 106 103 3 108 6 1 1 22 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 107 103 3 108 6 0 0 20 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 108 108 5 108 6 1 1 23 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 109 109 6 109 5 1 1 23 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 21 29 C G - - MP 110 109 6 114 6 2 2 21 39 -9.403 -9.342 -0.017 -8.119 -8.399 -8.794 -4.691 -4.665 -4.393 -0.773 -3.046 -4.820 3.322 -3.846 -4.406 -0.601 -4.712 -2.594 1.762 -4.742 -0.696 -3.217 ML 111 109 6 114 6 1 1 21 39 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 112 109 6 114 6 1 1 20 38 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 113 109 6 114 6 0 0 19 37 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 114 114 5 114 6 1 1 21 39 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 115 115 6 115 5 1 1 21 39 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 22 28 c g - - MP 116 115 6 120 4 2 2 19 37 -7.622 -5.286 -0.065 -6.243 -3.334 -3.373 -3.384 0.191 -0.539 -4.124 2.252 -3.267 -3.387 0.289 -3.880 -1.511 2.114 -3.579 1.383 -2.357 ML 117 115 6 120 4 1 1 20 38 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 118 115 6 120 4 1 1 19 37 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 119 115 6 120 4 0 0 18 36 -4.568 -4.250 -2.265 -0.520 IL 120 120 5 120 4 1 1 21 39 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 121 121 6 121 3 1 1 20 38 -1.543 -0.727 -4.244 0.000 0.000 0.000 0.000 [ MATL 30 ] 23 - G - - - ML 122 121 6 124 3 1 1 16 34 -8.600 -0.013 -7.254 -2.835 -4.208 1.896 -3.570 D 123 121 6 124 3 0 0 16 34 -6.174 -1.687 -0.566 IL 124 124 3 124 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 24 - U - - - ML 125 124 3 127 3 1 1 14 33 -8.600 -0.013 -7.254 -2.690 -2.488 -3.463 1.838 D 126 124 3 127 3 0 0 15 33 -6.174 -1.687 -0.566 IL 127 127 3 127 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 25 - A - - - ML 128 127 3 130 3 1 1 13 31 -8.600 -0.013 -7.254 1.890 -3.634 -3.151 -3.304 D 129 127 3 130 3 0 0 13 32 -6.174 -1.687 -0.566 IL 130 130 3 130 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 26 - G - - - ML 131 130 3 133 2 1 1 1 1 * 0.000 -2.057 -3.706 1.835 -3.126 D 132 130 3 133 2 0 0 0 0 * 0.000 IL 133 133 3 133 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 34 ] - - - - - - E 134 133 3 -1 0 0 0 0 0 [ BEGR 35 ] - - - - - - S 135 81 1 136 3 0 0 100 210 -8.600 -0.013 -7.254 IL 136 136 2 136 3 1 1 102 212 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 35 - U - - - ML 137 136 2 139 3 1 1 100 210 -8.600 -0.330 -2.307 -0.697 -0.036 -1.591 1.054 D 138 136 2 139 3 0 0 99 208 -6.174 -1.687 -0.566 IL 139 139 3 139 3 1 1 101 211 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 36 - u - - - ML 140 139 3 142 5 1 1 99 209 -5.514 -0.056 -7.193 -7.405 -8.297 0.348 -0.940 -1.044 0.783 D 141 139 3 142 5 0 0 98 208 -6.327 -0.261 -5.588 -3.963 -3.876 IL 142 142 3 142 5 1 1 99 209 -2.485 -0.466 -4.163 -5.996 -5.269 0.000 0.000 0.000 0.000 [ MATP 38 ] 38 85 C G - - MP 143 142 3 147 6 2 2 99 208 -9.403 -9.342 -0.017 -8.119 -8.399 -8.794 -4.449 -4.419 -4.236 -0.554 -2.990 -4.734 3.203 -3.757 -4.238 -0.383 -4.587 -2.354 1.380 -4.544 0.928 -3.066 ML 144 142 3 147 6 1 1 96 206 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 145 142 3 147 6 1 1 95 205 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 146 142 3 147 6 0 0 90 199 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 147 147 5 147 6 1 1 98 207 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 148 148 6 148 5 1 1 97 207 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 39 84 c g - - MP 149 148 6 153 6 2 2 97 206 -9.403 -9.342 -0.017 -8.119 -8.399 -8.794 -4.476 -4.428 -4.257 -0.546 -3.001 -4.755 2.926 -3.768 -4.256 -0.368 -4.604 -2.338 2.452 -4.569 -0.644 -3.078 ML 150 148 6 153 6 1 1 94 204 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 151 148 6 153 6 1 1 93 203 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 152 148 6 153 6 0 0 87 197 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 153 153 5 153 6 1 1 96 205 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 154 154 6 154 5 1 1 95 205 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 40 83 u a - - MP 155 154 6 159 6 2 2 95 204 -9.403 -9.342 -0.027 -8.119 -8.399 -6.818 -4.214 -4.168 -4.077 -0.324 -2.937 -4.649 2.466 -3.666 -4.067 -0.148 -4.459 -2.095 2.746 -4.350 0.172 -2.912 ML 156 154 6 159 6 1 1 91 201 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 157 154 6 159 6 1 1 90 200 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 158 154 6 159 6 0 0 83 193 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 159 159 5 159 6 1 1 93 203 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 160 160 6 160 5 1 1 93 203 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 41 82 u a - - MP 161 160 6 165 6 2 2 93 202 -9.393 -9.333 -0.066 -8.109 -8.389 -4.845 -2.865 -2.813 -2.979 1.828 -2.553 -3.799 1.718 -3.035 -3.002 1.126 -3.533 -0.930 1.873 -3.121 0.527 -1.997 ML 162 160 6 165 6 1 1 88 198 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 163 160 6 165 6 1 1 87 197 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 164 160 6 165 6 0 0 78 187 -9.235 -7.933 -3.730 -4.412 -4.430 -0.277 IL 165 165 5 165 6 1 1 92 201 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 166 166 6 166 5 1 1 91 201 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 42 81 u a - - MP 167 166 6 171 6 2 2 91 201 -4.205 -9.285 -0.338 -8.061 -8.341 -2.775 -1.739 -2.499 -2.633 1.461 -2.357 -3.468 1.737 -2.792 -2.673 1.289 -3.219 -0.745 2.074 -2.768 -0.182 -1.727 ML 168 166 6 171 6 1 1 81 191 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 169 166 6 171 6 1 1 78 188 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 170 166 6 171 6 0 0 65 175 -9.904 -8.602 -4.399 -5.081 -5.099 -0.168 IL 171 171 5 171 6 1 1 106 216 -0.242 -6.065 -2.960 -7.721 -8.497 -8.157 0.000 0.000 0.000 0.000 IR 172 172 6 172 5 1 1 52 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 57 80 g c - - MP 173 172 6 177 4 2 2 51 103 -1.157 -4.901 -1.007 -5.606 -2.409 -1.237 -2.533 1.167 -2.428 -3.330 1.560 -2.783 -2.614 2.021 -3.128 -0.299 1.263 -2.629 0.638 -1.641 ML 174 172 6 177 4 1 1 46 98 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 175 172 6 177 4 1 1 45 97 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 176 172 6 177 4 0 0 49 100 -6.719 -0.809 -1.929 -2.671 IL 177 177 5 177 4 1 1 51 103 -1.550 -0.899 -3.135 -6.873 0.000 0.000 0.000 0.000 IR 178 178 6 178 3 1 1 50 102 -0.516 -1.767 -7.228 0.000 0.000 0.000 0.000 [ MATL 44 ] 60 - a - - - ML 179 178 6 181 3 1 1 17 35 -8.600 -0.013 -7.254 0.503 -0.769 -0.116 0.103 D 180 178 6 181 3 0 0 17 35 -6.174 -1.687 -0.566 IL 181 181 3 181 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 61 - a - - - ML 182 181 3 184 3 1 1 16 34 -8.600 -0.013 -7.254 0.671 -1.109 -0.365 0.224 D 183 181 3 184 3 0 0 16 34 -6.174 -1.687 -0.566 IL 184 184 3 184 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 62 - u - - - ML 185 184 3 187 3 1 1 14 33 -8.600 -0.027 -5.954 0.451 -0.608 -1.286 0.648 D 186 184 3 187 3 0 0 14 33 -6.174 -1.687 -0.566 IL 187 187 3 187 3 1 1 18 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 63 - u - - - ML 188 187 3 190 3 1 1 13 31 -8.586 -0.401 -2.059 0.418 -0.745 -0.865 0.603 D 189 187 3 190 3 0 0 13 32 -6.360 -1.873 -0.484 IL 190 190 3 190 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 64 - u - - - ML 191 190 3 193 2 1 1 1 1 * 0.000 -0.230 -0.701 0.169 0.493 D 192 190 3 193 2 0 0 0 0 * 0.000 IL 193 193 3 193 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 49 ] - - - - - - E 194 193 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME S4-Fusobacteriales ACC RF03133 DESC S4-Fusobacteriales ribosomal protein leader LENG 62 MAXL 247 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 1 10:33:30 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED NSEQ 84 EFFN 8.620972 CKSUM 3176472191 STATS LOCAL MSV -8.1525 0.71915 STATS LOCAL VITERBI -8.5573 0.71915 STATS LOCAL FORWARD -3.4186 0.71915 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.23405 1.76878 1.30188 1.32303 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 0.00000 * 1 2.99286 0.59847 3.67025 0.98153 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 2 3.26646 3.19197 3.15764 0.12983 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 3 3.73452 4.58079 0.06981 3.40240 3 G - - : 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 4 4.20089 3.94970 4.75406 0.04380 4 U - - : 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 5 0.02861 4.87388 4.49079 4.67296 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 6 0.02861 4.87388 4.49079 4.67296 6 A - - : 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 7 0.02861 4.87388 4.49079 4.67296 7 A - - : 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 8 2.50983 3.83944 0.13783 3.65106 8 G - - ( 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 9 0.35457 4.29556 1.32500 3.95841 9 A - - ( 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 10 3.54917 1.27840 3.33842 0.41965 10 U - - ( 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 11 0.05195 4.77760 3.44001 4.59090 11 A - - ( 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 12 5.09752 3.84485 5.08232 0.03429 12 U - - ( 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 13 2.60899 4.25139 0.11004 4.11384 13 G - - ( 1.38629 1.38629 1.38629 1.38629 0.17620 1.88192 4.68265 0.11739 2.20037 1.09861 0.40547 14 2.01661 1.65628 1.49749 0.79329 15 u - - < 1.38629 1.38629 1.38629 1.38629 0.04587 4.68265 3.33594 1.46634 0.26236 1.09861 0.40547 15 1.88261 1.73622 1.86627 0.65986 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.36601 1.21402 4.65597 0.06282 2.79874 0.41884 1.07239 16 1.72176 2.96024 0.36764 2.56293 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.45381 4.68265 1.03411 1.46634 0.26236 1.09861 0.40547 17 0.28885 2.85587 2.36872 2.30487 19 A - - - 1.38629 1.38629 1.38629 1.38629 0.02872 4.25756 4.25756 1.46634 0.26236 0.05075 3.00614 18 2.48947 2.16955 0.28564 2.97032 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 19 3.83442 0.32881 3.69926 1.45303 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 20 3.11075 1.00529 2.91318 0.62513 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 21 4.19991 5.24374 0.02973 4.70859 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 22 4.20089 3.94970 4.75406 0.04380 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 23 0.02861 4.87388 4.49079 4.67296 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 24 3.26489 4.77839 0.06148 4.34114 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04301 3.41597 4.68265 0.49171 0.94567 1.09861 0.40547 25 0.98352 3.08481 0.64504 2.88904 28 G - - > 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 26 1.53305 3.85664 0.30617 3.62214 29 G - - > 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 27 3.25647 0.36247 2.10118 1.94344 30 C - - > 1.38629 1.38629 1.38629 1.38629 0.04352 3.40119 4.68265 0.48528 0.95588 1.09861 0.40547 28 2.72501 0.58399 2.75166 1.16167 32 C - - > 1.38629 1.38629 1.38629 1.38629 0.06341 4.68265 2.95290 1.46634 0.26236 1.09861 0.40547 29 1.30482 2.10443 1.31395 1.08439 33 u - - > 1.38629 1.38629 1.38629 1.38629 0.01953 4.63877 4.63877 1.46634 0.26236 0.30355 1.34015 30 1.11857 2.12064 1.21773 1.35713 34 a - - > 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 31 2.16327 1.36501 2.89312 0.55466 35 U - - , 1.38629 1.38629 1.38629 1.38629 0.28267 4.68265 1.43980 1.46634 0.26236 1.09861 0.40547 32 1.10405 2.34426 2.32404 0.74511 36 u - - , 1.38629 1.38629 1.38629 1.38629 0.04654 3.39658 4.42424 0.60718 0.78721 0.07520 2.62491 33 3.71875 0.39922 3.53500 1.28833 38 C - - < 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 34 3.73856 0.63203 3.55417 0.87684 39 C - - < 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 35 3.52007 1.03148 3.30995 0.54921 40 U - - < 1.38629 1.38629 1.38629 1.38629 0.03389 4.68265 3.72705 1.46634 0.26236 1.09861 0.40547 36 1.23136 1.63252 1.98211 0.98112 41 u - - < 1.38629 1.38629 1.38629 1.38629 0.09679 4.66773 2.49065 1.46634 0.26236 1.52611 0.24511 37 1.47147 1.54589 1.76666 0.95092 42 u - - < 1.38629 1.38629 1.38629 1.38629 0.66065 2.00732 1.05230 2.58311 0.07854 2.51937 0.08394 38 1.67332 1.65929 1.10881 1.23048 57 g - - < 1.38629 1.38629 1.38629 1.38629 0.80385 0.62165 4.17743 0.46409 0.99077 0.04459 3.13240 39 0.99482 2.04408 1.42845 1.34312 60 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 40 0.84805 2.46694 1.64855 1.22222 61 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 41 1.01376 1.92411 2.58747 0.87723 62 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03011 4.68265 3.89166 1.46634 0.26236 1.09861 0.40547 42 1.04928 2.06438 2.10160 0.91466 63 u - - _ 1.38629 1.38629 1.38629 1.38629 0.19402 4.67143 1.78974 1.46634 0.26236 0.64542 0.74326 43 1.71208 2.00941 1.14244 1.00403 64 u - - _ 1.38629 1.38629 1.38629 1.38629 1.03962 0.49253 3.34306 1.37857 0.29027 0.89274 0.52684 44 1.78150 1.14658 1.16975 1.59233 80 c - - > 1.38629 1.38629 1.38629 1.38629 0.05035 4.56556 3.25188 1.46634 0.26236 0.87323 0.54060 45 1.03245 1.90137 1.37520 1.41999 81 a - - > 1.38629 1.38629 1.38629 1.38629 0.02049 4.59143 4.59143 1.46634 0.26236 0.34229 1.23837 46 1.29658 2.12399 1.22634 1.15959 82 u - - > 1.38629 1.38629 1.38629 1.38629 0.01897 4.66773 4.66773 1.46634 0.26236 0.57051 0.83296 47 0.66402 3.46789 0.87678 3.27232 83 A - - > 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 48 0.92452 3.69556 0.60220 3.47899 84 G - - > 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 49 1.91437 3.66180 0.22942 3.44572 85 G - - > 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 50 1.38793 2.97751 0.47655 2.54382 86 G - - , 1.38629 1.38629 1.38629 1.38629 0.03203 4.68265 3.80461 1.46634 0.26236 1.09861 0.40547 51 4.36100 0.12560 4.17317 2.40948 87 C - - ) 1.38629 1.38629 1.38629 1.38629 0.01893 4.66955 4.66955 1.46634 0.26236 0.60497 0.78986 52 0.04017 5.26822 3.65227 4.79255 88 A - - ) 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 53 4.78200 3.85948 4.58437 0.04048 89 U - - ) 1.38629 1.38629 1.38629 1.38629 0.03203 3.80461 4.68265 0.69160 0.69469 1.09861 0.40547 54 0.63287 3.50468 0.91059 3.30801 91 A - - ) 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 55 4.14153 1.98870 4.06265 0.18630 92 U - - ) 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 56 3.87452 0.44889 3.64876 1.15558 93 C - - ) 1.38629 1.38629 1.38629 1.38629 0.03979 3.51472 4.68265 0.91520 0.51155 1.09861 0.40547 57 4.19991 5.24374 0.02973 4.70859 96 G - - : 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 58 0.02861 4.87388 4.49079 4.67296 97 A - - : 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 59 0.97631 2.37977 1.27240 1.38401 98 a - - : 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 60 4.19991 5.24374 0.02973 4.70859 99 G - - : 1.38629 1.38629 1.38629 1.38629 0.05848 3.04597 4.68265 0.70738 0.67912 1.09861 0.40547 61 0.02861 4.87388 4.49079 4.67296 102 A - - : 1.38629 1.38629 1.38629 1.38629 0.01868 4.68265 4.68265 1.46634 0.26236 1.09861 0.40547 62 0.07478 4.22833 3.19946 4.09272 103 A - - : 1.38629 1.38629 1.38629 1.38629 0.00938 4.67335 * 1.46634 0.26236 0.00000 * //