INFERNAL1/a [1.1.4 | Dec 2020] NAME L17-Actino-Proteobacteria ACC RF03132 DESC L17-Actino-Proteobacteria ribosomal protein leader STATES 177 NODES 43 CLEN 56 W 133 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 1 10:35:55 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 408 EFFN 9.304138 CKSUM 602413625 NULL 0.000 0.000 0.000 0.000 GA 34.90 TC 34.90 NC 34.60 EFP7GF -16.4691 0.71931 ECMLC 0.47995 -10.96526 2.32495 1600000 706979 0.001697 ECMGC 0.41905 -14.37228 -0.99410 1600000 108838 0.003675 ECMLI 0.46495 -8.64158 4.24968 1600000 481144 0.002494 ECMGI 0.44486 -10.44880 1.52298 1600000 82226 0.004865 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 3 0 1 133 222 -7.185 -17.655 -0.010 IL 1 1 2 1 3 1 14 137 226 -0.610 -4.491 -1.736 0.000 0.000 0.000 0.000 IR 2 2 3 2 2 1 13 134 224 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 1 ] - - - - - - B 3 2 3 4 72 0 12 133 222 [ BEGL 2 ] - - - - - - S 4 3 1 5 4 0 0 99 188 -0.022 -7.875 -7.282 -7.922 [ MATP 3 ] 1 55 C G - - MP 5 4 1 9 6 2 2 99 188 -9.955 -9.894 -0.012 -8.671 -8.950 -9.345 -4.356 -4.100 -3.513 0.279 -3.363 -5.180 3.172 -3.991 -4.269 1.072 -4.773 -1.663 1.123 -4.550 -0.881 -3.045 ML 6 4 1 9 6 1 1 97 186 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 7 4 1 9 6 1 1 96 186 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 8 4 1 9 6 0 0 92 181 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 9 9 5 9 6 1 1 98 187 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 10 10 6 10 5 1 1 98 187 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 54 c g - - MP 11 10 6 15 6 2 2 97 186 -9.955 -9.894 -0.012 -8.671 -8.950 -9.345 -3.941 -3.727 -3.999 0.248 -3.225 -4.829 2.838 -3.794 -3.951 1.584 -4.469 -0.476 1.260 -4.149 -0.549 -1.825 ML 12 10 6 15 6 1 1 95 184 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 13 10 6 15 6 1 1 95 184 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 14 10 6 15 6 0 0 90 179 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 15 15 5 15 6 1 1 96 185 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 16 16 6 16 5 1 1 96 185 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 53 g c - - MP 17 16 6 21 6 2 2 95 184 -9.955 -9.894 -0.047 -7.999 -5.331 -9.345 -3.787 -2.884 -3.743 1.134 -4.195 -4.427 1.144 -4.221 -4.017 2.911 -1.204 0.180 0.507 -3.698 -1.459 -2.766 ML 18 16 6 21 6 1 1 93 182 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 19 16 6 21 6 1 1 93 182 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 20 16 6 21 6 0 0 88 177 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 21 21 5 21 6 1 1 94 183 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 22 22 6 22 5 1 1 94 183 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 52 g c - - MP 23 22 6 27 6 2 2 93 182 -9.919 -9.859 -0.212 -8.635 -3.151 -5.667 -2.764 -2.575 -2.887 1.494 -2.880 -3.226 1.334 -2.338 -3.006 2.423 -3.092 -0.000 1.051 -2.972 -0.460 -2.054 ML 24 22 6 27 6 1 1 91 180 -6.299 -6.645 -1.240 -1.054 -6.495 -4.025 0.301 -0.197 -0.321 0.131 MR 25 22 6 27 6 1 1 91 181 -7.548 -6.277 -0.885 -6.255 -1.389 -4.468 0.192 -0.151 -0.150 0.079 D 26 22 6 27 6 0 0 86 175 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 27 27 5 27 6 1 1 92 182 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 28 28 6 28 5 1 1 92 182 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 51 c g - - MP 29 28 6 33 6 2 2 91 181 -9.761 -9.701 -0.120 -7.836 -5.035 -4.552 -3.090 -2.580 -3.197 0.869 -2.913 -3.618 2.396 -2.835 -3.253 2.002 -3.773 -0.266 1.028 -3.306 -0.332 -2.231 ML 30 28 6 33 6 1 1 89 178 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 31 28 6 33 6 1 1 90 179 -8.684 -7.413 -0.690 -7.391 -1.534 -5.605 -1.507 1.543 -2.326 -0.903 D 32 28 6 33 6 0 0 83 172 -9.670 -8.368 -4.165 -4.848 -4.865 -0.199 IL 33 33 5 33 6 1 1 90 180 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 34 34 6 34 5 1 1 90 180 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 50 g c - - MP 35 34 6 39 6 2 2 89 179 -9.793 -9.732 -0.045 -8.509 -7.167 -5.754 -2.567 -2.212 -2.508 1.014 -2.661 -3.531 2.093 -2.810 -2.799 2.134 -2.696 -0.119 0.864 -2.820 -0.314 -1.358 ML 36 34 6 39 6 1 1 87 176 -6.297 -6.643 -1.244 -1.052 -6.493 -4.022 0.305 -0.206 -0.315 0.129 MR 37 34 6 39 6 1 1 88 177 -8.036 -6.765 -0.571 -6.744 -1.877 -4.957 -0.662 -0.822 -1.335 1.267 D 38 34 6 39 6 0 0 81 171 -10.442 -9.141 -4.938 -5.620 -5.637 -0.113 IL 39 39 5 39 6 1 1 89 178 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 40 40 6 40 5 1 1 88 178 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 49 g c - - MP 41 40 6 45 6 2 2 87 177 -9.846 -9.785 -0.091 -8.049 -7.637 -4.325 -3.343 -2.679 -3.375 1.562 -3.600 -3.316 1.545 -2.577 -3.572 2.672 -4.013 -0.204 0.375 -3.389 -1.140 -2.351 ML 42 40 6 45 6 1 1 85 174 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 43 40 6 45 6 1 1 85 174 -7.108 -5.837 -1.402 -5.816 -0.949 -4.029 0.337 -0.244 -0.384 0.172 D 44 40 6 45 6 0 0 81 170 -10.674 -9.372 -5.169 -5.852 -5.869 -0.096 IL 45 45 5 45 6 1 1 87 176 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 46 46 6 46 5 1 1 87 176 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 48 G C - - MP 47 46 6 51 6 2 2 86 175 -9.776 -9.715 -0.067 -8.491 -8.771 -4.728 -3.856 -2.817 -3.769 0.907 -3.578 -3.765 1.230 -3.580 -4.072 3.080 -4.415 -0.016 0.176 -3.700 -1.525 -2.747 ML 48 46 6 51 6 1 1 82 171 -6.286 -6.632 -1.259 -1.041 -6.482 -4.011 0.317 -0.372 -0.249 0.189 MR 49 46 6 51 6 1 1 81 171 -7.065 -5.794 -1.477 -5.772 -0.906 -3.985 0.254 -0.089 -0.392 0.145 D 50 46 6 51 6 0 0 80 170 -11.202 -9.900 -5.697 -6.379 -6.397 -0.066 IL 51 51 5 51 6 1 1 85 174 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 52 52 6 52 5 1 1 85 174 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 47 g c - - MP 53 52 6 57 4 2 2 84 173 -1.224 -3.030 -1.182 -6.839 -3.853 -3.142 -3.829 0.964 -3.571 -4.567 2.271 -3.929 -3.951 2.496 -4.382 -0.543 0.632 -3.863 -0.820 -2.705 ML 54 52 6 57 4 1 1 76 165 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 55 52 6 57 4 1 1 74 163 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 56 52 6 57 4 0 0 80 170 -6.927 -0.776 -1.880 -2.878 IL 57 57 5 57 4 1 1 85 174 -0.760 -1.433 -4.775 -8.513 0.000 0.000 0.000 0.000 IR 58 58 6 58 3 1 1 83 172 -0.297 -2.443 -8.740 0.000 0.000 0.000 0.000 [ MATL 12 ] 17 - g - - - ML 59 58 6 61 3 1 1 15 34 -9.522 -0.007 -8.176 0.230 -0.205 0.426 -0.699 D 60 58 6 61 3 0 0 16 34 -6.174 -1.687 -0.566 IL 61 61 3 61 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 18 - a - - - ML 62 61 3 64 3 1 1 14 32 -9.522 -0.007 -8.176 0.121 0.045 -0.273 0.075 D 63 61 3 64 3 0 0 15 33 -6.174 -1.687 -0.566 IL 64 64 3 64 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 19 - c - - - ML 65 64 3 67 3 1 1 12 30 -9.522 -0.072 -4.399 0.011 0.737 -0.975 -0.292 D 66 64 3 67 3 0 0 13 32 -6.174 -1.687 -0.566 IL 67 67 3 67 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 20 - c - - - ML 68 67 3 70 2 1 1 1 1 * 0.000 -0.806 0.868 -0.252 -0.391 D 69 67 3 70 2 0 0 0 0 * 0.000 IL 70 70 3 70 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 16 ] - - - - - - E 71 70 3 -1 0 0 0 0 0 [ BEGR 17 ] - - - - - - S 72 3 1 73 3 0 0 55 79 -9.522 -0.035 -5.459 IL 73 73 2 73 3 1 1 57 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 56 - a - - - ML 74 73 2 76 3 1 1 55 79 -9.494 -0.143 -3.430 0.530 -0.368 0.049 -0.422 D 75 73 2 76 3 0 0 52 77 -6.783 -2.296 -0.345 IL 76 76 3 76 3 1 1 56 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 57 - a - - - ML 77 76 3 79 3 1 1 54 79 -9.359 -0.293 -2.455 0.265 -0.047 -0.395 0.098 D 78 76 3 79 3 0 0 50 75 -8.141 -3.654 -0.125 IL 79 79 3 79 3 1 1 55 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 58 - a - - - ML 80 79 3 82 5 1 1 53 78 -1.428 -0.692 -7.918 -8.130 -9.022 0.748 -0.114 -1.127 -0.091 D 81 79 3 82 5 0 0 47 71 -7.304 -0.127 -6.566 -4.940 -4.853 IL 82 82 3 82 5 1 1 53 78 -1.072 -0.983 -6.549 -8.381 -7.655 0.000 0.000 0.000 0.000 [ MATP 21 ] 63 96 C G - - MP 83 82 3 87 6 2 2 45 63 -9.955 -9.894 -0.012 -8.671 -8.950 -9.345 -5.080 -5.066 -4.934 -1.255 -1.142 -1.858 3.561 -3.375 -4.942 -1.112 -5.309 -3.035 0.815 -5.223 -1.478 -3.800 ML 84 82 3 87 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 85 82 3 87 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 86 82 3 87 6 0 0 41 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 87 87 5 87 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 88 88 6 88 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 64 95 u a - - MP 89 88 6 93 6 2 2 43 61 -9.955 -9.894 -0.031 -6.010 -8.950 -9.345 -4.319 -4.115 -4.334 0.278 -3.080 -5.144 2.233 -3.957 -4.236 0.318 -4.743 -1.497 2.857 -4.520 -0.703 -3.023 ML 90 88 6 93 6 1 1 42 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 91 88 6 93 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 92 88 6 93 6 0 0 40 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 93 93 5 93 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 94 94 6 94 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 65 94 G C - - MP 95 94 6 99 4 2 2 41 59 -8.549 -3.790 -0.156 -5.199 -3.919 -2.832 -2.331 1.054 -4.601 -2.859 -0.101 -3.500 -3.369 3.260 -4.499 -0.549 0.478 -2.897 -2.012 -2.846 ML 96 94 6 99 4 1 1 40 59 -4.060 -4.242 -0.473 -2.583 0.324 0.011 -0.572 0.095 MR 97 94 6 99 4 1 1 40 59 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 98 94 6 99 4 0 0 39 58 -4.568 -4.250 -2.265 -0.520 IL 99 99 5 99 4 1 1 42 60 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 100 100 6 100 3 1 1 40 59 -1.712 -1.206 -1.937 0.000 0.000 0.000 0.000 [ MATL 24 ] 66 - A - - - ML 101 100 6 103 5 1 1 38 57 -4.464 -0.190 -8.233 -3.984 -6.418 1.431 -0.681 -1.997 -1.222 D 102 100 6 103 5 0 0 37 56 -3.798 -0.426 -5.325 -3.700 -3.613 IL 103 103 3 103 5 1 1 38 57 -2.847 -0.419 -3.629 -6.358 -5.632 0.000 0.000 0.000 0.000 [ MATP 25 ] 68 91 C G - - MP 104 103 3 108 6 2 2 37 56 -9.879 -9.819 -0.012 -8.595 -8.875 -9.270 -8.482 -8.660 -7.239 -4.878 -5.576 -5.163 3.965 -7.252 -8.029 -4.784 -7.145 -6.898 -2.996 -8.405 -3.497 -6.823 ML 105 103 3 108 6 1 1 36 54 -6.405 -6.751 -1.108 -1.160 -6.601 -4.130 0.183 0.054 -0.485 0.153 MR 106 103 3 108 6 1 1 35 54 -7.853 -6.582 -1.701 -6.560 -0.665 -4.774 -0.104 -0.788 0.517 0.083 D 107 103 3 108 6 0 0 33 52 -9.315 -8.013 -3.810 -4.493 -4.510 -0.260 IL 108 108 5 108 6 1 1 37 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 109 109 6 109 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 69 90 c g - - MP 110 109 6 114 6 2 2 35 54 -9.904 -9.843 -0.012 -8.619 -8.899 -9.294 -2.510 -2.643 -2.682 1.835 -0.487 -3.531 1.896 -2.900 -2.724 1.182 -3.287 -1.041 1.305 -2.826 0.338 -1.314 ML 111 109 6 114 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 112 109 6 114 6 1 1 34 52 -7.653 -6.382 -0.801 -6.360 -1.494 -4.574 0.879 -0.767 -0.692 -0.067 D 113 109 6 114 6 0 0 31 50 -9.315 -8.013 -3.810 -4.493 -4.510 -0.260 IL 114 114 5 114 6 1 1 35 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 115 115 6 115 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 70 89 C G - - MP 116 115 6 120 6 2 2 33 52 -9.945 -9.884 -0.012 -8.661 -8.941 -9.336 -4.976 -4.805 -4.844 -0.753 -3.010 -5.471 3.470 -4.345 -4.780 -0.117 -5.195 -1.464 0.337 -5.104 0.382 -3.549 ML 117 115 6 120 6 1 1 32 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 118 115 6 120 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 119 115 6 120 6 0 0 29 48 -9.315 -8.013 -3.810 -4.493 -2.235 -0.585 IL 120 120 5 120 6 1 1 33 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 121 121 6 121 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 71 88 C G - - MP 122 121 6 126 6 2 2 31 50 -9.945 -9.884 -0.012 -8.661 -8.941 -9.336 -6.924 -7.052 -6.212 -3.213 -4.609 -6.343 3.888 -5.652 -6.423 -1.935 -6.366 -5.180 -1.277 -6.832 -2.194 -5.219 ML 123 121 6 126 6 1 1 30 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 124 121 6 126 6 1 1 30 48 -7.174 -5.903 -1.300 -5.882 -1.016 -4.095 0.735 -0.638 -0.351 -0.138 D 125 121 6 126 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 126 126 5 126 6 1 1 31 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 127 127 6 127 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 72 87 G C - - MP 128 127 6 132 6 2 2 29 48 -9.955 -9.894 -0.012 -8.671 -8.950 -9.345 -6.778 -2.734 -7.250 -0.856 -8.157 -5.691 -2.959 -7.580 -5.683 3.871 -5.929 -1.777 -3.247 -5.860 -5.142 -6.132 ML 129 127 6 132 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 130 127 6 132 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 131 127 6 132 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 132 132 5 132 6 1 1 29 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 133 133 6 133 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 73 86 G C - - MP 134 133 6 138 6 2 2 27 46 -9.955 -9.894 -0.012 -8.671 -8.950 -9.345 -7.408 -4.475 -8.472 -1.768 -8.774 -5.746 -3.464 -8.440 -5.827 3.926 -6.053 -2.341 -3.828 -6.118 -5.759 -7.321 ML 135 133 6 138 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 136 133 6 138 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 137 133 6 138 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 138 138 5 138 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 139 139 6 139 5 1 1 27 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 74 85 U G - - MP 140 139 6 144 4 2 2 25 44 -8.578 -8.785 -0.017 -7.199 -6.342 -6.339 -5.732 -2.593 -4.166 -5.956 0.123 -5.035 -5.797 -2.649 -5.957 -4.351 -0.887 -6.285 3.783 -4.617 ML 141 139 6 144 4 1 1 27 45 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 142 139 6 144 4 1 1 26 45 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 143 139 6 144 4 0 0 25 44 -4.568 -4.250 -2.265 -0.520 IL 144 144 5 144 4 1 1 28 47 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 145 145 6 145 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 75 - A - - - ML 146 145 6 148 3 1 1 22 41 -9.522 -0.007 -8.176 1.914 -4.196 -3.269 -3.778 D 147 145 6 148 3 0 0 22 41 -6.174 -1.687 -0.566 IL 148 148 3 148 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 76 - C - - - ML 149 148 3 151 3 1 1 21 40 -9.522 -0.007 -8.176 -4.751 1.951 -5.313 -3.830 D 150 148 3 151 3 0 0 21 40 -6.174 -1.687 -0.566 IL 151 151 3 151 3 1 1 25 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 77 - C - - - ML 152 151 3 154 3 1 1 20 39 -9.522 -0.007 -8.176 -4.751 1.951 -5.313 -3.830 D 153 151 3 154 3 0 0 20 38 -6.174 -1.687 -0.566 IL 154 154 3 154 3 1 1 24 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 78 - U - - - ML 155 154 3 157 3 1 1 19 37 -9.522 -0.007 -8.176 -4.198 -3.824 -4.999 1.942 D 156 154 3 157 3 0 0 19 37 -6.174 -1.687 -0.566 IL 157 157 3 157 3 1 1 23 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 79 - G - - - ML 158 157 3 160 3 1 1 18 36 -9.522 -0.007 -8.176 -2.390 -2.214 1.799 -3.145 D 159 157 3 160 3 0 0 18 36 -6.174 -1.687 -0.566 IL 160 160 3 160 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 80 - A - - - ML 161 160 3 163 3 1 1 16 35 -9.522 -0.007 -8.176 1.618 -3.521 -0.435 -3.260 D 162 160 3 163 3 0 0 17 35 -6.174 -1.687 -0.566 IL 163 163 3 163 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 81 - U - - - ML 164 163 3 166 3 1 1 15 34 -9.522 -0.007 -8.176 -2.564 0.176 -3.408 1.382 D 165 163 3 166 3 0 0 16 34 -6.174 -1.687 -0.566 IL 166 166 3 166 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 82 - A - - - ML 167 166 3 169 3 1 1 14 32 -9.522 -0.007 -8.176 1.909 -3.297 -3.818 -3.807 D 168 166 3 169 3 0 0 15 33 -6.174 -1.687 -0.566 IL 169 169 3 169 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 83 - C - - - ML 170 169 3 172 3 1 1 12 30 -9.522 -0.007 -8.176 -4.751 1.951 -5.313 -3.830 D 171 169 3 172 3 0 0 13 32 -6.174 -1.687 -0.566 IL 172 172 3 172 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 84 - G - - - ML 173 172 3 175 2 1 1 1 1 * 0.000 -4.172 -5.694 1.960 -4.905 D 174 172 3 175 2 0 0 0 0 * 0.000 IL 175 175 3 175 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 42 ] - - - - - - E 176 175 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME L17-Actino-Proteobacteria ACC RF03132 DESC L17-Actino-Proteobacteria ribosomal protein leader LENG 56 MAXL 145 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 1 10:35:55 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED NSEQ 408 EFFN 89.850769 CKSUM 602413625 STATS LOCAL MSV -7.8320 0.71931 STATS LOCAL VITERBI -8.3408 0.71931 STATS LOCAL FORWARD -3.2511 0.71931 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.81646 1.05014 1.08531 1.89903 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 0.00000 * 1 3.11154 0.27772 2.08565 2.60735 1 C - - < 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 2 3.69753 0.52624 1.36201 2.05380 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 3 2.28154 1.89546 0.41259 2.45698 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04266 6.96511 3.19859 1.46634 0.26236 1.09861 0.40547 4 1.62304 1.81457 0.70860 1.91419 4 g - - < 1.38629 1.38629 1.38629 1.38629 0.26185 6.92441 1.47232 1.46634 0.26236 0.04523 3.11860 5 2.52917 0.75645 1.02504 2.38420 5 c - - < 1.38629 1.38629 1.38629 1.38629 0.14804 6.71754 1.99221 1.46634 0.26236 0.44332 1.02695 6 2.29997 0.98302 0.85008 2.32096 6 g - - < 1.38629 1.38629 1.38629 1.38629 0.04441 6.76275 3.16335 1.46634 0.26236 0.71721 0.66965 7 1.56770 1.41566 0.68712 3.08590 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.10198 6.82937 2.34477 1.46634 0.26236 2.75157 0.06596 8 2.95454 1.70133 0.32435 3.15922 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.07475 6.73902 2.64733 1.46634 0.26236 3.61003 0.02742 9 2.39753 0.89869 0.77567 3.18055 9 g - - < 1.38629 1.38629 1.38629 1.38629 0.71488 0.67435 6.67301 0.95437 0.48622 0.00740 4.90991 10 1.23683 1.39501 0.92744 2.71353 17 g - - _ 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 11 1.37824 1.21105 1.50552 1.47756 18 c - - _ 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 12 1.43371 0.65158 2.23088 2.01799 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00821 6.96511 4.92887 1.46634 0.26236 1.09861 0.40547 13 2.65060 0.55942 1.41778 2.15761 20 C - - _ 1.38629 1.38629 1.38629 1.38629 1.19264 0.46396 2.69133 1.79763 0.18115 2.26817 0.10926 14 3.72050 0.83506 0.85850 2.13594 47 c - - > 1.38629 1.38629 1.38629 1.38629 0.21305 6.88962 1.65618 1.46634 0.26236 0.41014 1.08932 15 3.27457 0.38956 1.72854 2.23244 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.00236 6.74250 6.74250 1.46634 0.26236 0.91675 0.51052 16 3.37617 0.75686 1.45179 1.33738 49 c - - > 1.38629 1.38629 1.38629 1.38629 0.00488 6.83774 5.57323 1.46634 0.26236 1.50430 0.25125 17 3.17280 1.09676 0.97483 1.39875 50 g - - > 1.38629 1.38629 1.38629 1.38629 0.00209 6.86447 6.86447 1.46634 0.26236 0.40402 1.10151 18 3.03058 0.82782 0.91125 2.18313 51 c - - > 1.38629 1.38629 1.38629 1.38629 0.00458 6.93375 5.62734 1.46634 0.26236 0.05766 2.88187 19 2.13930 0.85751 1.67697 1.30525 52 c - - > 1.38629 1.38629 1.38629 1.38629 0.00190 6.96256 6.96256 1.46634 0.26236 0.43281 1.04607 20 2.60460 0.61024 1.55954 1.75668 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 21 2.38423 1.56809 0.49489 2.41063 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 22 2.68018 2.12875 0.26624 3.07459 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.02485 6.96511 3.74643 1.46634 0.26236 1.09861 0.40547 23 0.93224 1.59595 1.22190 2.21691 56 a - - - 1.38629 1.38629 1.38629 1.38629 0.11341 6.94219 2.24198 1.46634 0.26236 3.29565 0.03775 24 1.20735 1.29081 1.64035 1.46081 57 a - - - 1.38629 1.38629 1.38629 1.38629 0.24393 6.83094 1.53535 1.46634 0.26236 4.91240 0.00738 25 0.70285 1.34672 2.75906 1.70712 58 a - - - 1.38629 1.38629 1.38629 1.38629 0.68466 0.70448 6.58976 0.77656 0.61616 0.00600 5.11926 26 6.28868 0.09375 6.28350 2.45609 63 C - - < 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 27 3.15216 1.27687 3.16911 0.45210 64 U - - < 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 28 2.30216 3.26640 0.27514 2.27940 65 G - - < 1.38629 1.38629 1.38629 1.38629 0.08418 6.96511 2.52841 1.46634 0.26236 1.09861 0.40547 29 0.27809 1.79440 3.75459 2.93490 66 A - - - 1.38629 1.38629 1.38629 1.38629 0.15360 2.92410 2.42279 0.03774 3.29581 0.02339 3.76694 30 6.03292 0.01747 6.23894 4.34504 68 C - - < 1.38629 1.38629 1.38629 1.38629 0.00206 6.88092 6.88092 1.46634 0.26236 1.39077 0.28619 31 1.11911 1.15253 1.93893 1.54301 69 a - - < 1.38629 1.38629 1.38629 1.38629 0.00201 6.90229 6.90229 1.46634 0.26236 0.23840 1.55062 32 6.15950 0.14244 3.16909 2.42361 70 C - - < 1.38629 1.38629 1.38629 1.38629 0.00191 6.95341 6.95341 1.46634 0.26236 2.72870 0.06753 33 6.25830 0.03831 3.91282 4.15479 71 C - - < 1.38629 1.38629 1.38629 1.38629 0.00191 6.95341 6.95341 1.46634 0.26236 0.13996 2.03555 34 3.47631 6.62552 0.03421 6.57956 72 G - - < 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 35 5.59090 6.64316 0.00638 6.62544 73 G - - < 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 36 6.19075 4.68422 6.14755 0.01352 74 U - - < 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 37 0.02343 6.46834 4.24442 4.92508 75 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 38 7.06751 0.00322 7.41658 6.34282 76 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 39 7.06751 0.00322 7.41658 6.34282 77 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 40 7.72063 7.02258 8.53111 0.00153 78 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 41 4.41590 2.84623 0.07506 6.13289 79 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 42 0.21537 6.42161 1.65862 6.36047 80 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 43 6.21689 1.17198 6.81774 0.37519 81 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 44 0.02250 3.95751 6.50220 6.41382 82 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 45 7.06751 0.00322 7.41658 6.34282 83 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 46 6.34180 7.57029 0.00332 6.86991 84 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 47 5.22427 6.26508 0.01004 5.91463 85 G - - > 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 48 6.38120 0.00878 6.40525 5.22266 86 C - - > 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 49 6.20267 0.03308 6.28028 3.55275 87 C - - > 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 50 4.03803 3.90298 0.04185 5.75443 88 G - - > 1.38629 1.38629 1.38629 1.38629 0.01361 6.96511 4.37637 1.46634 0.26236 1.09861 0.40547 51 4.54147 3.70719 0.05766 3.87167 89 G - - > 1.38629 1.38629 1.38629 1.38629 0.00191 6.95341 6.95341 1.46634 0.26236 2.72870 0.06753 52 1.55773 2.00579 1.16161 1.07339 90 u - - > 1.38629 1.38629 1.38629 1.38629 0.00191 6.95341 6.95341 1.46634 0.26236 2.72870 0.06753 53 4.66116 4.70521 0.03587 4.09027 91 G - - > 1.38629 1.38629 1.38629 1.38629 0.10119 2.62841 3.72792 0.25834 1.47988 0.13996 2.03555 54 2.35838 0.24694 3.45369 2.37935 94 C - - > 1.38629 1.38629 1.38629 1.38629 0.00193 6.94202 6.94202 1.46634 0.26236 0.07647 2.60882 55 0.46890 3.46048 1.24220 2.91601 95 A - - > 1.38629 1.38629 1.38629 1.38629 0.00189 6.96511 6.96511 1.46634 0.26236 1.09861 0.40547 56 2.11805 3.65717 0.16655 4.91269 96 G - - > 1.38629 1.38629 1.38629 1.38629 0.00095 6.96416 * 1.46634 0.26236 0.00000 * //