{"rfam": {"acc": "RF03118", "id": "gCoV-5UTR", "description": "Gammacoronavirus 5'UTR", "comment": "The 5' UTR of gammacoronaviruses is similar to the 5' UTRs of alpha- and betacoronaviruses, as they also contain 3 helices denoted as SL1, SL2 and SL4. Further, in a subset of gammacoronaviruses a third stem-loop, SL3, is observed. SL1 and SL2 have major impacts of the level of viral replication, whereas SL4 is hypothesized to play a role as a \"spacer\" during the template-switch of CoV sgRNA synthesis.", "curation": {"author": "Lamkiewicz K", "seed_source": "Lamkiewicz K", "num_seed": 3, "num_full": 2, "num_species": 5, "type": "Cis-reg;", "structure_source": "Predicted;"}, "cm": {"build_command": "cmbuild -F CM SEED", "calibrate_command": "cmcalibrate --mpi CM", "search_command": "cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB", "cutoffs": {"gathering": 124.9, "trusted": 157.8, "noise": 117.4}}, "release": {"date": "2026-01-16", "number": "15.1"}, "clan": {"acc": "CL00116", "id": "Coronavirus-5UTR"}}}