INFERNAL1/a [1.1.4 | Dec 2020] NAME queA ACC RF03093 DESC queA RNA STATES 186 NODES 52 CLEN 59 W 115 ALPH RNA RF no CONS yes MAP yes DATE Mon Oct 1 21:11:00 2018 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 8 EFFN 3.722656 CKSUM 873143656 NULL 0.000 0.000 0.000 0.000 GA 52.60 TC 52.60 NC 49.60 EFP7GF -12.2941 0.71918 ECMLC 0.81513 -7.15405 0.84455 1600000 814206 0.001474 ECMGC 0.40655 -16.50928 -3.08482 1600000 93819 0.004264 ECMLI 0.51905 -10.30523 1.52463 1600000 557044 0.002154 ECMGI 0.45200 -11.44177 0.11262 1600000 74166 0.005393 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 115 181 -7.418 -8.663 -0.055 -5.117 IL 1 1 2 1 4 1 19 116 182 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 21 116 182 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 82 - U - - MR 3 2 3 5 3 1 21 115 181 -8.883 -0.013 -7.200 -2.548 -2.368 -3.318 1.822 D 4 2 3 5 3 0 15 113 179 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 20 115 181 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 81 - A - - MR 6 5 3 8 3 1 20 114 180 -8.883 -0.013 -7.200 1.877 -3.489 -3.017 -3.145 D 7 5 3 8 3 0 14 112 178 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 19 114 180 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 80 - U - - MR 9 8 3 11 3 1 19 113 179 -2.395 -0.316 -7.200 -2.548 -2.368 -3.318 1.822 D 10 8 3 11 3 0 14 110 176 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 19 113 179 -2.840 -0.268 -5.079 0.000 0.000 0.000 0.000 [ MATR 4 ] - 78 - C - - MR 12 11 3 14 3 1 18 112 178 -8.883 -0.013 -7.200 -3.079 1.849 -3.879 -2.248 D 13 11 3 14 3 0 13 109 175 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 17 112 178 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 77 - G - - MR 15 14 3 17 3 1 17 111 177 -8.883 -0.013 -7.200 -2.699 -4.059 1.885 -3.429 D 16 14 3 17 3 0 12 108 175 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 16 111 177 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 76 - G - - MR 18 17 3 20 3 1 16 110 176 -8.883 -0.013 -7.200 -2.699 -4.059 1.885 -3.429 D 19 17 3 20 3 0 11 107 174 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 16 110 176 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 75 - U - - MR 21 20 3 23 3 1 15 109 175 -8.883 -0.013 -7.200 -2.548 -2.368 -3.318 1.822 D 22 20 3 23 3 0 11 106 173 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 15 109 175 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 74 - G - - MR 24 23 3 26 3 1 15 108 174 -8.883 -0.013 -7.200 -2.699 -4.059 1.885 -3.429 D 25 23 3 26 3 0 10 105 172 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 14 108 174 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 73 - U - - MR 27 26 3 29 3 1 14 107 173 -8.883 -0.013 -7.200 -2.548 -2.368 -3.318 1.822 D 28 26 3 29 3 0 9 104 171 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 13 107 173 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 72 - A - - MR 30 29 3 32 3 1 13 106 172 -8.883 -0.013 -7.200 1.061 -1.964 0.362 -1.423 D 31 29 3 32 3 0 9 103 170 -6.390 -1.568 -0.620 IR 32 32 3 32 3 1 12 106 172 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 71 - A - - MR 33 32 3 35 3 1 12 105 171 -8.883 -0.013 -7.200 1.499 -0.980 -1.831 -1.377 D 34 32 3 35 3 0 8 102 169 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 11 105 171 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 70 - G - - MR 36 35 3 38 3 1 11 104 170 -8.883 -0.013 -7.200 -1.067 -1.868 1.304 -0.359 D 37 35 3 38 3 0 7 101 168 -6.390 -1.568 -0.620 IR 38 38 3 38 3 1 11 104 170 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 69 - U - - MR 39 38 3 41 3 1 10 103 169 -8.883 -0.013 -7.200 -2.548 -2.368 -3.318 1.822 D 40 38 3 41 3 0 7 101 167 -6.390 -1.568 -0.620 IR 41 41 3 41 3 1 10 103 169 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 68 - C - - MR 42 41 3 44 3 1 9 102 168 -8.883 -0.013 -7.200 -3.079 1.849 -3.879 -2.248 D 43 41 3 44 3 0 6 100 166 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 9 102 168 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 67 - a - - MR 45 44 3 47 3 1 8 101 167 -8.883 -0.013 -7.200 0.770 -0.072 -1.298 -0.094 D 46 44 3 47 3 0 6 99 165 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 8 101 167 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 66 - A - - MR 48 47 3 50 3 1 7 100 166 -8.883 -0.013 -7.200 1.252 -2.011 0.023 -1.496 D 49 47 3 50 3 0 5 98 164 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 7 100 166 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 65 - A - - MR 51 50 3 53 2 1 6 99 165 -1.963 -0.427 1.043 -0.729 -0.414 -0.773 D 52 50 3 53 2 0 5 97 163 -4.432 -0.068 IR 53 53 3 53 2 1 6 99 165 -1.582 -0.587 0.000 0.000 0.000 0.000 [ BIF 18 ] - - - - - - B 54 53 3 55 111 0 5 97 163 [ BEGL 19 ] - - - - - - S 55 54 1 56 4 0 0 32 50 -0.035 -7.164 -6.571 -7.211 [ MATP 20 ] 1 20 U A - - MP 56 55 1 60 6 2 2 32 50 -4.296 -9.303 -0.092 -8.079 -8.359 -8.754 -5.682 -5.525 -5.343 -1.750 -4.020 -5.766 0.312 -4.801 -5.339 -1.654 -5.639 -3.388 3.747 -5.753 -1.662 -3.942 ML 57 55 1 60 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 58 55 1 60 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 59 55 1 60 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 60 60 5 60 6 1 1 31 50 -3.238 -1.136 -1.419 -5.156 -5.932 -5.593 0.000 0.000 0.000 0.000 IR 61 61 6 61 5 1 1 31 49 -2.843 -0.350 -6.354 -4.522 -5.627 0.000 0.000 0.000 0.000 [ MATP 21 ] 3 18 U A - - MP 62 61 6 66 6 2 2 29 48 -9.364 -9.303 -0.018 -8.079 -8.359 -8.754 -5.682 -5.525 -5.343 -1.750 -4.020 -5.766 0.312 -4.801 -5.339 -1.654 -5.639 -3.388 3.747 -5.753 -1.662 -3.942 ML 63 61 6 66 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 64 61 6 66 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 65 61 6 66 6 0 0 26 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 66 66 5 66 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 67 67 6 67 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 4 17 C G - - MP 68 67 6 72 6 2 2 27 46 -9.364 -9.303 -0.018 -8.079 -8.359 -8.754 -4.232 -3.985 -4.097 -0.137 -3.021 -4.709 3.241 -3.706 -4.075 1.195 -4.470 -1.771 0.779 -4.378 -0.643 -2.902 ML 69 67 6 72 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 70 67 6 72 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 71 67 6 72 6 0 0 24 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 72 72 5 72 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 73 73 6 73 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 5 16 A U - - MP 74 73 6 78 6 2 2 25 44 -9.364 -9.303 -0.018 -8.079 -8.359 -8.754 -4.869 -3.679 -4.744 3.744 -5.711 -6.924 -1.340 -4.712 -4.670 -0.098 -5.266 -1.021 -1.743 -5.882 -3.272 -3.569 ML 75 73 6 78 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 76 73 6 78 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 77 73 6 78 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 78 78 5 78 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 79 79 6 79 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 6 15 U A - - MP 80 79 6 84 6 2 2 23 42 -9.364 -9.303 -0.018 -8.079 -8.359 -8.754 -5.682 -5.525 -5.343 -1.750 -4.020 -5.766 0.312 -4.801 -5.339 -1.654 -5.639 -3.388 3.747 -5.753 -1.662 -3.942 ML 81 79 6 84 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 82 79 6 84 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 83 79 6 84 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 84 84 5 84 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 85 85 6 85 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 7 14 G C - - MP 86 85 6 90 4 2 2 21 40 -7.542 -7.749 -0.035 -6.163 -5.813 -3.621 -6.103 -0.560 -6.713 -5.090 -1.813 -6.358 -4.960 3.816 -5.236 -1.381 -2.177 -5.149 -3.923 -4.965 ML 87 85 6 90 4 1 1 23 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 88 85 6 90 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 89 85 6 90 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 90 90 5 90 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 91 91 6 91 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 8 - C - - - ML 92 91 6 94 3 1 1 18 37 -8.523 -0.014 -7.177 -3.079 1.849 -3.879 -2.248 D 93 91 6 94 3 0 0 18 37 -6.174 -1.687 -0.566 IL 94 94 3 94 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 9 - C - - - ML 95 94 3 97 3 1 1 17 36 -8.523 -0.014 -7.177 -3.079 1.849 -3.879 -2.248 D 96 94 3 97 3 0 0 17 35 -6.174 -1.687 -0.566 IL 97 97 3 97 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 10 - G - - - ML 98 97 3 100 3 1 1 16 34 -8.523 -0.014 -7.177 -2.699 -4.059 1.885 -3.429 D 99 97 3 100 3 0 0 16 34 -6.174 -1.687 -0.566 IL 100 100 3 100 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 11 - U - - - ML 101 100 3 103 3 1 1 14 33 -8.523 -0.014 -7.177 -0.618 -1.445 -1.984 1.448 D 102 100 3 103 3 0 0 15 33 -6.174 -1.687 -0.566 IL 103 103 3 103 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 12 - A - - - ML 104 103 3 106 3 1 1 13 31 -8.523 -0.014 -7.177 1.877 -3.489 -3.017 -3.145 D 105 103 3 106 3 0 0 13 32 -6.174 -1.687 -0.566 IL 106 106 3 106 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 13 - A - - - ML 107 106 3 109 2 1 1 1 1 * 0.000 1.877 -3.489 -3.017 -3.145 D 108 106 3 109 2 0 0 0 0 * 0.000 IL 109 109 3 109 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 32 ] - - - - - - E 110 109 3 -1 0 0 0 0 0 [ BEGR 33 ] - - - - - - S 111 54 1 112 3 0 0 79 145 -8.523 -0.014 -7.177 IL 112 112 2 112 3 1 1 81 147 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 21 - G - - - ML 113 112 2 115 3 1 1 79 145 -8.523 -0.014 -7.177 -0.637 -2.649 1.568 -2.107 D 114 112 2 115 3 0 0 77 143 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 1 80 146 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 22 - c - - - ML 116 115 3 118 3 1 1 78 144 -8.523 -0.014 -7.177 -1.244 0.853 -2.097 0.621 D 117 115 3 118 3 0 0 76 142 -6.174 -1.687 -0.566 IL 118 118 3 118 3 1 1 79 145 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 23 - G - - - ML 119 118 3 121 3 1 1 77 143 -8.523 -0.014 -7.177 -1.237 -2.096 1.441 -0.674 D 120 118 3 121 3 0 0 75 141 -6.174 -1.687 -0.566 IL 121 121 3 121 3 1 1 78 144 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 24 - A - - - ML 122 121 3 124 5 1 1 76 142 -3.060 -0.207 -7.407 -7.619 -8.511 1.039 -1.284 -1.419 0.215 D 123 121 3 124 5 0 0 74 140 -4.959 -0.803 -4.221 -2.596 -2.508 IL 124 124 3 124 5 1 1 78 144 -0.861 -1.276 -5.582 -7.415 -6.688 0.000 0.000 0.000 0.000 [ MATP 38 ] 29 62 g c - - MP 125 124 3 129 6 2 2 75 141 -9.364 -9.303 -0.018 -8.079 -8.359 -8.754 -3.291 -2.691 -3.307 1.527 -3.196 -4.054 1.515 -3.510 -3.442 2.428 -3.889 -0.510 1.340 -3.349 -0.824 -2.275 ML 126 124 3 129 6 1 1 73 139 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 127 124 3 129 6 1 1 72 139 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 128 124 3 129 6 0 0 68 135 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 129 129 5 129 6 1 1 74 140 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 130 130 6 130 5 1 1 74 140 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 30 61 c g - - MP 131 130 6 135 6 2 2 73 139 -9.364 -9.303 -0.018 -8.079 -8.359 -8.754 -2.936 0.264 -3.035 0.412 -2.523 -3.794 2.489 -3.052 -3.053 0.552 -3.559 -1.201 1.080 -3.204 1.418 -2.085 ML 132 130 6 135 6 1 1 71 137 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 133 130 6 135 6 1 1 71 137 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 134 130 6 135 6 0 0 67 133 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 135 135 5 135 6 1 1 72 138 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 136 136 6 136 5 1 1 72 138 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 31 60 u a - - MP 137 136 6 141 6 2 2 71 137 -9.364 -9.303 -0.093 -4.207 -8.359 -8.754 -4.043 -3.999 -3.938 -0.185 -2.854 -4.538 2.449 -3.566 -3.927 -0.009 -4.336 -1.943 2.649 -4.196 0.447 -2.785 ML 138 136 6 141 6 1 1 69 135 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 139 136 6 141 6 1 1 69 135 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 140 136 6 141 6 0 0 65 131 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 141 141 5 141 6 1 1 70 136 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 142 142 6 142 5 1 1 70 136 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 32 59 g c - - MP 143 142 6 147 6 2 2 69 135 -9.289 -9.228 -0.019 -8.005 -8.285 -8.680 -3.256 -2.635 -3.270 0.960 -3.165 -4.012 1.651 -3.473 -3.403 2.499 -3.847 0.186 1.283 -3.308 -0.782 -2.233 ML 144 142 6 147 6 1 1 67 133 -7.099 -7.445 -0.581 -1.854 -7.295 -4.824 -0.402 -0.633 -1.047 1.080 MR 145 142 6 147 6 1 1 66 132 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 146 142 6 147 6 0 0 63 129 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 147 147 5 147 6 1 1 68 134 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 148 148 6 148 5 1 1 68 134 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 33 58 c g - - MP 149 148 6 153 6 2 2 67 133 -3.441 -4.295 -0.238 -8.079 -8.359 -8.754 -3.571 -3.464 -3.592 1.075 -2.750 -4.345 2.542 -3.364 -3.561 0.546 -4.049 -1.370 2.173 -3.785 -0.394 -2.443 ML 150 148 6 153 6 1 1 65 131 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 151 148 6 153 6 1 1 64 130 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 152 148 6 153 6 0 0 61 127 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 153 153 5 153 6 1 1 66 133 -3.623 -0.779 -1.804 -5.541 -6.317 -5.978 0.000 0.000 0.000 0.000 IR 154 154 6 154 5 1 1 66 132 -1.665 -0.964 -7.320 -5.488 -2.802 0.000 0.000 0.000 0.000 [ MATP 43 ] 35 55 C G - - MP 155 154 6 159 6 2 2 65 131 -9.291 -9.230 -0.098 -8.006 -8.286 -4.171 -3.938 -3.720 -3.852 1.185 -2.871 -4.513 3.127 -3.523 -3.829 0.314 -4.250 -1.544 0.919 -4.124 -0.514 -2.688 ML 156 154 6 159 6 1 1 62 128 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 157 154 6 159 6 1 1 61 128 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 158 154 6 159 6 0 0 60 126 -10.048 -8.746 -4.543 -5.225 -5.243 -0.151 IL 159 159 5 159 6 1 1 64 130 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 160 160 6 160 5 1 1 64 130 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 36 54 c g - - MP 161 160 6 165 4 2 2 63 129 -1.350 -7.414 -0.775 -5.828 -3.657 -3.321 -3.613 0.417 -2.812 -4.303 2.815 -3.401 -3.613 1.775 -4.050 -1.137 1.052 -3.812 -0.443 -2.469 ML 162 160 6 165 4 1 1 58 124 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 163 160 6 165 4 1 1 57 123 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 164 160 6 165 4 0 0 60 126 -6.098 -1.521 -1.339 -2.049 IL 165 165 5 165 4 1 1 64 130 -3.280 -0.448 -2.711 -6.449 0.000 0.000 0.000 0.000 IR 166 166 6 166 3 1 1 64 130 -0.402 -2.082 -7.157 0.000 0.000 0.000 0.000 [ MATL 45 ] 38 - u - - - ML 167 166 6 169 3 1 1 18 37 -8.523 -0.014 -7.177 -0.597 -0.484 -0.316 0.864 D 168 166 6 169 3 0 0 18 36 -6.174 -1.687 -0.566 IL 169 169 3 169 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 39 - u - - - ML 170 169 3 172 3 1 1 17 36 -8.523 -0.014 -7.177 -0.595 0.251 -0.583 0.566 D 171 169 3 172 3 0 0 17 35 -6.174 -1.687 -0.566 IL 172 172 3 172 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 40 - a - - - ML 173 172 3 175 3 1 1 16 34 -8.523 -0.014 -7.177 0.899 0.245 -1.519 -0.735 D 174 172 3 175 3 0 0 16 34 -6.174 -1.687 -0.566 IL 175 175 3 175 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 41 - a - - - ML 176 175 3 178 3 1 1 14 33 -8.523 -0.301 -2.430 0.480 -0.221 -0.534 0.080 D 177 175 3 178 3 0 0 14 33 -6.174 -1.687 -0.566 IL 178 178 3 178 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 42 - a - - - ML 179 178 3 181 3 1 1 13 31 -8.239 -0.261 -2.626 0.586 0.460 -1.327 -0.465 D 180 178 3 181 3 0 0 12 30 -7.954 -3.467 -0.143 IL 181 181 3 181 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 43 - U - - - ML 182 181 3 184 2 1 1 1 1 * 0.000 -0.848 -0.212 -1.597 1.170 D 183 181 3 184 2 0 0 0 0 * 0.000 IL 184 184 3 184 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 51 ] - - - - - - E 185 184 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME queA ACC RF03093 DESC queA RNA LENG 59 MAXL 164 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Oct 1 21:11:00 2018 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED NSEQ 8 EFFN 5.894531 CKSUM 873143656 STATS LOCAL MSV -7.5599 0.71918 STATS LOCAL VITERBI -8.6080 0.71918 STATS LOCAL FORWARD -3.5868 0.71918 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.35878 1.50809 1.38862 1.30094 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 0.00000 * 1 4.53366 3.18968 4.42182 0.06607 1 U - - < 1.38629 1.38629 1.38629 1.38629 0.14270 2.10258 4.52391 0.16902 1.86104 1.09861 0.40547 2 4.45190 3.17903 4.37250 0.06817 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 3 3.08106 0.38110 1.85636 2.16506 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 4 0.08778 4.23347 2.94525 4.07772 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 5 4.46864 3.18127 4.38272 0.06773 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 6 3.36004 4.32525 0.06379 4.28074 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 7 4.15632 0.05663 4.63325 3.51760 8 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 8 4.15632 0.05663 4.63325 3.51760 9 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 9 3.79188 4.78607 0.04541 4.30560 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 10 1.93722 2.73160 3.15118 0.29038 11 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 11 0.04621 4.39464 4.03059 4.19643 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 12 0.04621 4.39464 4.03059 4.19643 13 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 13 4.38577 0.07840 4.19277 3.03978 14 C - - > 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 14 0.07787 4.57175 3.00638 4.19256 15 A - - > 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 15 4.26051 3.34657 4.03011 0.06945 16 U - - > 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 16 2.42379 1.92333 0.34824 2.82402 17 G - - > 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 17 0.07936 4.53255 2.99858 4.15525 18 A - - > 1.38629 1.38629 1.38629 1.38629 0.14270 2.10258 4.52391 0.16902 1.86104 1.09861 0.40547 18 0.07806 4.56685 3.00541 4.18789 20 A - - > 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 19 1.93544 3.62268 0.23442 3.27282 21 G - - - 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 20 2.61334 0.70082 3.24665 0.93745 22 c - - - 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 21 2.62439 3.25420 0.29448 1.93803 23 G - - - 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 22 0.58373 2.53252 2.63047 1.23551 24 A - - - 1.38629 1.38629 1.38629 1.38629 0.18123 1.86490 4.52391 1.38989 0.28649 1.09861 0.40547 23 1.56245 1.70358 0.90391 1.59276 29 g - - < 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 24 1.77105 0.85811 2.57673 1.10908 30 c - - < 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 25 3.04646 1.03257 2.82326 0.62181 31 U - - < 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 26 2.03750 1.59424 0.82392 1.47896 32 g - - < 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 27 1.90538 0.92439 2.30505 1.03646 33 c - - < 1.38629 1.38629 1.38629 1.38629 0.41116 1.53721 2.10258 0.09802 2.37119 1.09861 0.40547 28 1.83071 0.45213 2.62867 2.03064 35 C - - < 1.38629 1.38629 1.38629 1.38629 0.16529 4.40592 1.96507 1.46634 0.26236 2.58481 0.07841 29 2.54309 0.65586 1.40630 1.84940 36 C - - < 1.38629 1.38629 1.38629 1.38629 0.61008 0.81487 4.26902 0.06207 2.81035 0.08799 2.47417 30 1.99175 1.76062 1.57575 0.72412 38 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 31 1.99097 1.13904 1.79559 0.97477 39 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 32 0.68144 1.13768 2.76198 2.20378 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 33 1.03008 1.52201 1.77793 1.36351 41 a - - _ 1.38629 1.38629 1.38629 1.38629 0.25596 4.52391 1.53721 1.46634 0.26236 1.09861 0.40547 34 0.92775 0.96563 2.55961 1.92088 42 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02764 4.29558 4.29558 1.46634 0.26236 3.08284 0.04691 35 2.24691 1.55013 2.77965 0.47805 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.79056 0.93410 1.87426 1.93598 0.15582 0.09613 2.38969 36 2.09557 1.48171 0.59783 2.30511 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.02471 4.40592 4.40592 1.46634 0.26236 0.16348 1.89167 37 2.28724 2.83126 0.40882 1.74249 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.25596 1.53721 4.52391 0.72856 0.65895 1.09861 0.40547 38 1.13862 2.49830 0.84207 1.79157 58 g - - > 1.38629 1.38629 1.38629 1.38629 0.14548 4.52391 2.08306 1.46634 0.26236 1.09861 0.40547 39 1.78671 0.92436 1.45263 1.60072 59 c - - > 1.38629 1.38629 1.38629 1.38629 0.02478 4.40321 4.40321 1.46634 0.26236 0.16056 1.90827 40 0.78849 2.99557 0.83152 2.81218 60 a - - > 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 41 2.21221 1.76567 0.44399 2.55105 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 42 1.74807 0.98138 1.57640 1.40903 62 c - - > 1.38629 1.38629 1.38629 1.38629 0.32776 1.31448 4.52391 0.48687 0.95333 1.09861 0.40547 43 0.58482 1.92724 1.69193 2.17967 65 A - - : 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 44 0.44415 3.23371 1.32525 2.92840 66 A - - : 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 45 0.79372 1.39779 2.48663 1.52553 67 a - - : 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 46 4.15632 0.05663 4.63325 3.51760 68 C - - : 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 47 3.72942 3.52542 4.27414 0.06975 69 U - - : 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 48 2.48430 3.07398 0.37583 1.69466 70 G - - : 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 49 0.26711 2.10755 3.02993 2.74023 71 A - - : 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 50 0.57860 3.20198 1.07307 2.87039 72 A - - : 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 51 3.72942 3.52542 4.27414 0.06975 73 U - - : 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 52 3.79188 4.78607 0.04541 4.30560 74 G - - : 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 53 3.72942 3.52542 4.27414 0.06975 75 U - - : 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 54 3.79188 4.78607 0.04541 4.30560 76 G - - : 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 55 3.79188 4.78607 0.04541 4.30560 77 G - - : 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 56 4.15632 0.05663 4.63325 3.51760 78 C - - : 1.38629 1.38629 1.38629 1.38629 0.28328 1.44459 4.52391 0.08957 2.45718 1.09861 0.40547 57 3.72942 3.52542 4.27414 0.06975 80 U - - : 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 58 0.04621 4.39464 4.03059 4.19643 81 A - - : 1.38629 1.38629 1.38629 1.38629 0.02193 4.52391 4.52391 1.46634 0.26236 1.09861 0.40547 59 3.72942 3.52542 4.27414 0.06975 82 U - - : 1.38629 1.38629 1.38629 1.38629 0.01103 4.51300 * 1.46634 0.26236 0.00000 * //