INFERNAL1/a [1.1.5 | Sep 2023] NAME DUF805 ACC RF03081 DESC DUF805 RNA STATES 213 NODES 67 CLEN 68 W 84 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 09:44:03 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03081/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 46 EFFN 6.044800 CKSUM 1020549017 NULL 0.000 0.000 0.000 0.000 GA 51.10 TC 51.20 NC 51.00 EFP7GF -13.3293 0.71889 ECMLC 0.66377 -7.48807 1.73411 1600000 546587 0.002195 ECMGC 0.39029 -15.91136 -3.43573 1600000 52082 0.007680 ECMLI 0.54082 -7.18995 3.12773 1600000 318102 0.003772 ECMGI 0.39895 -12.48840 -0.50976 1600000 47591 0.008405 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 84 104 -8.065 -8.272 -0.024 -6.686 IL 1 1 2 1 4 6 33 89 108 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 6 32 88 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 3 7 33 85 104 -9.024 -0.010 -7.679 0.640 -0.431 -1.011 0.268 D 4 2 3 5 3 3 27 83 103 -6.174 -1.687 -0.566 IL 5 5 3 5 3 5 32 87 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 7 32 84 103 -9.024 -0.010 -7.679 0.872 -0.578 -0.544 -0.297 D 7 5 3 8 3 2 26 82 102 -6.174 -1.687 -0.566 IL 8 8 3 8 3 5 31 86 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - a - - - ML 9 8 3 11 3 6 31 82 102 -9.024 -0.010 -7.679 0.987 -0.684 -0.782 -0.296 D 10 8 3 11 3 2 26 81 101 -6.174 -1.687 -0.566 IL 11 11 3 11 3 5 30 85 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - a - - - ML 12 11 3 14 3 5 30 81 101 -9.024 -0.010 -7.679 0.789 -0.235 -1.037 -0.096 D 13 11 3 14 3 2 25 80 100 -6.174 -1.687 -0.566 IL 14 14 3 14 3 4 29 84 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - a - - - ML 15 14 3 17 3 4 29 80 100 -9.365 -0.030 -5.689 0.974 -0.831 -0.750 -0.187 D 16 14 3 17 3 1 24 79 98 -5.620 -0.734 -1.403 IL 17 17 3 17 3 4 28 81 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 74 - a - - MR 18 17 3 20 3 5 29 79 99 -9.344 -0.009 -7.662 0.805 -0.467 -1.481 0.227 D 19 17 3 20 3 1 23 78 97 -6.705 -1.882 -0.476 IR 20 20 3 20 3 4 28 80 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 73 - a - - MR 21 20 3 23 3 5 28 78 98 -9.344 -0.009 -7.662 0.624 -0.719 -0.950 0.415 D 22 20 3 23 3 1 22 77 96 -6.705 -1.882 -0.476 IR 23 23 3 23 3 3 27 79 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 72 - a - - MR 24 23 3 26 3 5 27 77 97 -9.344 -0.009 -7.662 0.993 -1.127 -1.251 0.179 D 25 23 3 26 3 1 22 76 95 -6.705 -1.882 -0.476 IR 26 26 3 26 3 3 26 78 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 71 - A - - MR 27 26 3 29 3 4 27 76 96 -9.344 -0.009 -7.662 1.249 -1.094 -1.071 -0.560 D 28 26 3 29 3 0 21 75 94 -6.705 -1.882 -0.476 IR 29 29 3 29 3 3 26 77 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 70 - a - - MR 30 29 3 32 3 4 26 75 95 -9.344 -0.009 -7.662 0.637 -0.218 -0.630 -0.091 D 31 29 3 32 3 0 21 74 93 -6.705 -1.882 -0.476 IR 32 32 3 32 3 3 25 76 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 69 - A - - MR 33 32 3 35 3 4 25 74 94 -9.344 -0.009 -7.662 1.479 -1.788 -0.814 -1.500 D 34 32 3 35 3 0 20 73 92 -6.705 -1.098 -0.935 IR 35 35 3 35 3 2 24 75 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 68 - G - - MR 36 35 3 38 3 3 24 73 93 -9.365 -0.009 -7.683 0.011 -2.110 1.201 -1.116 D 37 35 3 38 3 0 19 72 91 -6.390 -1.568 -0.620 IR 38 38 3 38 3 2 23 74 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 67 - G - - MR 39 38 3 41 3 3 23 72 92 -2.085 -0.397 -7.683 -0.859 -2.451 1.516 -1.299 D 40 38 3 41 3 0 18 70 90 -6.390 -1.568 -0.620 IR 41 41 3 41 3 2 23 72 91 -3.270 -0.194 -5.509 0.000 0.000 0.000 0.000 [ MATR 14 ] - 65 - A - - MR 42 41 3 44 3 3 22 71 90 -9.365 -0.009 -7.683 1.935 -4.386 -3.859 -4.102 D 43 41 3 44 3 0 18 69 89 -6.390 -1.568 -0.620 IR 44 44 3 44 3 2 21 72 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 64 - U - - MR 45 44 3 47 3 3 21 70 89 -9.365 -0.009 -7.683 -3.426 -3.126 -4.212 1.902 D 46 44 3 47 3 0 17 68 88 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 21 71 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 63 - G - - MR 48 47 3 50 3 2 20 69 88 -9.365 -0.009 -7.683 -2.823 -3.999 1.863 -2.648 D 49 47 3 50 3 0 16 67 87 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 20 70 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 62 - A - - MR 51 50 3 53 3 2 19 68 87 -9.365 -0.009 -7.683 1.935 -4.386 -3.859 -4.102 D 52 50 3 53 3 0 16 66 86 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 19 69 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 61 - G - - MR 54 53 3 56 3 2 18 67 86 -9.365 -0.009 -7.683 -1.646 -2.146 1.618 -1.377 D 55 53 3 56 3 0 15 65 85 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 18 68 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 60 - u - - MR 57 56 3 59 3 2 17 66 85 -9.365 -0.009 -7.683 -0.057 0.138 -1.381 0.637 D 58 56 3 59 3 0 15 64 84 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 17 67 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 59 - A - - MR 60 59 3 62 3 1 16 65 84 -9.365 -0.035 -5.458 1.855 -2.773 -3.103 -3.051 D 61 59 3 62 3 0 14 63 83 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 16 66 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 58 - u - - MR 63 62 3 65 3 1 15 64 83 -9.339 -0.034 -5.536 0.453 -1.270 -0.880 0.743 D 64 62 3 65 3 0 14 63 82 -6.769 -1.028 -0.998 IR 65 65 3 65 3 1 16 65 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 57 - A - - MR 66 65 3 68 2 1 14 63 82 -9.534 -0.002 1.306 -1.787 -1.914 -0.040 D 67 65 3 68 2 0 13 62 81 -4.795 -0.053 IR 68 68 3 68 2 1 15 64 83 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 23 ] - - - - - - B 69 68 3 70 126 0 13 62 81 [ BEGL 24 ] - - - - - - S 70 69 1 71 4 0 0 32 50 -0.028 -7.503 -6.910 -7.550 [ MATP 25 ] 6 24 G C - - MP 71 70 1 75 6 2 2 32 50 -9.640 -9.579 -0.030 -6.187 -8.635 -9.030 -3.896 -1.704 -3.763 1.648 -4.694 -4.400 0.022 -4.389 -4.138 3.077 -4.432 0.066 -0.003 -3.658 -1.945 -1.550 ML 72 70 1 75 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 73 70 1 75 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 74 70 1 75 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 75 75 5 75 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 76 76 6 76 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 7 23 U A - - MP 77 76 6 81 6 2 2 30 48 -9.624 -9.563 -0.015 -8.340 -8.620 -9.015 -4.371 -4.229 -4.329 0.240 -3.428 -5.031 0.919 -1.175 -4.301 -0.404 -4.749 -2.119 3.395 -4.603 -1.105 -3.177 ML 78 76 6 81 6 1 1 29 47 -6.519 -6.865 -0.986 -1.274 -6.715 -4.245 0.187 -0.687 0.438 -0.176 MR 79 76 6 81 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 80 76 6 81 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 81 81 5 81 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 82 82 6 82 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 8 22 G C - - MP 83 82 6 87 6 2 2 28 46 -9.640 -9.579 -0.015 -8.355 -8.635 -9.030 -4.317 -2.942 -4.200 1.165 -5.146 -4.719 -0.306 -4.774 -4.426 3.346 -4.721 -0.388 0.287 -4.057 -2.322 -3.138 ML 84 82 6 87 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 85 82 6 87 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 86 82 6 87 6 0 0 26 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 87 87 5 87 6 1 1 28 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 88 88 6 88 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 9 21 G C - - MP 89 88 6 93 4 2 2 26 44 -8.065 -8.272 -0.024 -6.686 -6.264 -1.967 -6.617 -0.921 -7.501 -5.334 -2.391 -6.997 -5.310 3.845 -5.559 -1.709 -2.686 -5.431 -4.539 -5.514 ML 90 88 6 93 4 1 1 27 46 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 91 88 6 93 4 1 1 26 45 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 92 88 6 93 4 0 0 25 44 -4.568 -4.250 -2.265 -0.520 IL 93 93 5 93 4 1 1 28 47 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 94 94 6 94 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 10 - A - - - ML 95 94 6 97 3 1 1 23 41 -9.024 -0.010 -7.679 1.935 -4.386 -3.859 -4.102 D 96 94 6 97 3 0 0 22 41 -6.174 -1.687 -0.566 IL 97 97 3 97 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 11 - G - - - ML 98 97 3 100 3 1 1 22 40 -9.024 -0.113 -3.765 -1.876 -3.960 1.836 -3.408 D 99 97 3 100 3 0 0 21 40 -6.174 -1.687 -0.566 IL 100 100 3 100 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 12 - a - - - ML 101 100 3 103 3 1 1 21 39 -8.922 -0.037 -5.421 0.712 -1.063 -0.934 0.443 D 102 100 3 103 3 0 0 20 38 -7.391 -2.904 -0.217 IL 103 103 3 103 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 13 - C - - - ML 104 103 3 106 3 1 1 20 38 -8.895 -0.011 -7.549 -1.368 1.545 -2.810 -0.857 D 105 103 3 106 3 0 0 19 37 -7.580 -0.435 -1.971 IL 106 106 3 106 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 14 - C - - - ML 107 106 3 109 3 1 1 19 37 -9.024 -0.010 -7.679 -0.927 1.385 -2.570 -0.526 D 108 106 3 109 3 0 0 18 37 -6.174 -1.687 -0.566 IL 109 109 3 109 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 15 - A - - - ML 110 109 3 112 3 1 1 17 35 -9.024 -0.010 -7.679 1.711 -2.150 -1.747 -2.304 D 111 109 3 112 3 0 0 17 36 -6.174 -1.687 -0.566 IL 112 112 3 112 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 16 - G - - - ML 113 112 3 115 3 1 1 16 34 -9.024 -0.010 -7.679 -2.378 -4.295 1.880 -3.705 D 114 112 3 115 3 0 0 16 34 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 17 - A - - - ML 116 115 3 118 3 1 1 15 33 -5.476 -0.040 -7.679 1.108 -0.544 -1.157 -0.493 D 117 115 3 118 3 0 0 14 32 -6.174 -1.687 -0.566 IL 118 118 3 118 3 1 1 17 35 -1.579 -0.704 -4.279 0.000 0.000 0.000 0.000 [ MATL 37 ] 19 - a - - - ML 119 118 3 121 3 1 1 12 31 -9.024 -0.010 -7.679 0.968 -0.665 -0.513 -0.488 D 120 118 3 121 3 0 0 13 32 -6.174 -1.687 -0.566 IL 121 121 3 121 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 20 - A - - - ML 122 121 3 124 2 1 1 1 1 * 0.000 1.470 -0.736 -1.758 -1.585 D 123 121 3 124 2 0 0 0 0 * 0.000 IL 124 124 3 124 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 39 ] - - - - - - E 125 124 3 -1 0 0 0 0 0 [ BEGR 40 ] - - - - - - S 126 69 1 127 3 0 2 43 62 -9.024 -0.028 -5.863 IL 127 127 2 127 3 1 2 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 25 - U - - - ML 128 127 2 130 3 1 3 43 62 -9.007 -0.010 -7.661 -0.563 -1.110 -1.444 1.318 D 129 127 2 130 3 0 0 42 61 -6.481 -1.176 -0.873 IL 130 130 3 130 3 1 1 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 26 - u - - - ML 131 130 3 133 3 1 2 42 61 -9.024 -0.040 -5.313 0.351 -0.535 -1.511 0.752 D 132 130 3 133 3 0 0 41 60 -6.174 -1.687 -0.566 IL 133 133 3 133 3 1 1 45 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 27 - a - - - ML 134 133 3 136 3 1 1 41 60 -8.995 -0.261 -2.612 0.354 -0.602 -0.292 0.318 D 135 133 3 136 3 0 0 40 59 -6.650 -2.163 -0.383 IL 136 136 3 136 3 1 1 44 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 28 - A - - - ML 137 136 3 139 3 1 1 40 59 -1.365 -0.756 -5.674 1.719 -2.072 -2.379 -1.848 D 138 136 3 139 3 0 0 38 57 -3.493 -1.113 -1.156 IL 139 139 3 139 3 1 1 40 59 -2.095 -0.501 -4.076 0.000 0.000 0.000 0.000 [ MATL 45 ] 32 - A - - - ML 140 139 3 142 3 1 1 38 57 -8.868 -0.011 -7.522 1.508 -1.648 -2.015 -0.761 D 141 139 3 142 3 0 0 37 56 -7.751 -0.379 -2.143 IL 142 142 3 142 3 1 1 41 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 33 - A - - - ML 143 142 3 145 3 1 1 37 56 -9.024 -0.010 -7.679 1.858 -2.818 -3.123 -3.080 D 144 142 3 145 3 0 0 36 55 -6.174 -1.687 -0.566 IL 145 145 3 145 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 34 - A - - - ML 146 145 3 148 3 1 1 36 55 -9.024 -0.010 -7.679 1.857 -2.801 -3.116 -3.069 D 147 145 3 148 3 0 0 35 54 -6.174 -1.687 -0.566 IL 148 148 3 148 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 35 - A - - - ML 149 148 3 151 3 1 1 35 54 -9.024 -0.010 -7.679 1.861 -3.601 -2.424 -3.356 D 150 148 3 151 3 0 0 34 53 -6.174 -1.687 -0.566 IL 151 151 3 151 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 36 - C - - - ML 152 151 3 154 3 1 1 34 53 -9.024 -0.010 -7.679 -2.273 1.732 -2.980 -1.537 D 153 151 3 154 3 0 0 33 52 -6.174 -1.687 -0.566 IL 154 154 3 154 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 37 - G - - - ML 155 154 3 157 3 1 1 33 52 -9.024 -0.113 -3.762 -0.871 -2.599 1.565 -1.601 D 156 154 3 157 3 0 0 32 51 -6.174 -1.687 -0.566 IL 157 157 3 157 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 38 - G - - - ML 158 157 3 160 5 1 1 32 51 -7.959 -0.063 -7.774 -7.986 -5.034 -0.676 -2.381 1.487 -1.399 D 159 157 3 160 5 0 0 31 50 -5.764 -0.404 -5.025 -3.400 -3.313 IL 160 160 3 160 5 1 1 32 51 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 39 56 G C - - MP 161 160 3 165 6 2 2 31 50 -9.615 -9.554 -0.015 -8.331 -8.611 -9.006 -5.191 -3.460 -5.193 0.395 -6.081 -5.088 -0.599 -5.682 -4.891 3.672 -5.171 -1.152 -1.501 -4.766 -3.240 -4.108 ML 162 160 3 165 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 163 160 3 165 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 164 160 3 165 6 0 0 28 47 -9.547 -8.245 -1.503 -4.725 -4.742 -0.817 IL 165 165 5 165 6 1 1 31 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 166 166 6 166 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 53 ] 40 55 G C - - MP 167 166 6 171 6 2 2 29 48 -9.640 -9.579 -0.015 -8.355 -8.635 -9.030 -5.359 -2.173 -5.403 0.095 -6.475 -5.163 -1.506 -5.924 -4.981 3.705 -5.260 -0.530 -1.772 -4.895 -3.562 -4.317 ML 168 166 6 171 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 169 166 6 171 6 1 1 29 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 170 166 6 171 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 171 171 5 171 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 172 172 6 172 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 54 ] 41 54 c g - - MP 173 172 6 177 4 2 2 27 46 -8.065 -8.272 -0.024 -6.686 -3.408 -3.378 -2.459 0.787 -2.824 -4.318 2.958 -2.219 -3.472 0.451 -4.000 -1.387 1.407 -3.667 -0.150 -2.409 ML 174 172 6 177 4 1 1 28 47 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 175 172 6 177 4 1 1 28 47 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 176 172 6 177 4 0 0 27 46 -4.568 -4.250 -2.265 -0.520 IL 177 177 5 177 4 1 1 30 48 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 178 178 6 178 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 42 - G - - - ML 179 178 6 181 3 1 1 24 43 -9.024 -0.010 -7.679 -1.441 -3.185 1.732 -2.331 D 180 178 6 181 3 0 0 24 42 -6.174 -1.687 -0.566 IL 181 181 3 181 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 43 - a - - - ML 182 181 3 184 3 1 1 23 42 -9.024 -0.010 -7.679 0.397 -0.847 -0.134 0.282 D 183 181 3 184 3 0 0 23 41 -6.174 -1.687 -0.566 IL 184 184 3 184 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 44 - a - - - ML 185 184 3 187 3 1 1 22 40 -9.024 -0.032 -5.639 0.913 -0.661 -0.813 -0.127 D 186 184 3 187 3 0 0 21 40 -6.174 -1.687 -0.566 IL 187 187 3 187 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 45 - A - - - ML 188 187 3 190 3 1 1 21 39 -9.002 -0.010 -7.656 1.208 -1.587 -1.373 -0.042 D 189 187 3 190 3 0 0 20 39 -6.545 -1.099 -0.936 IL 190 190 3 190 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 46 - C - - - ML 191 190 3 193 3 1 1 20 38 -9.024 -0.010 -7.679 -1.310 1.250 -2.520 0.062 D 192 190 3 193 3 0 0 19 38 -6.174 -1.687 -0.566 IL 193 193 3 193 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 47 - C - - - ML 194 193 3 196 3 1 1 18 37 -2.004 -0.446 -5.926 -1.399 1.356 -2.639 -0.153 D 195 193 3 196 3 0 0 17 35 -6.174 -1.687 -0.566 IL 196 196 3 196 3 1 1 18 37 -2.578 -0.310 -5.278 0.000 0.000 0.000 0.000 [ MATL 61 ] 49 - G - - - ML 197 196 3 199 3 1 1 17 35 -9.008 -0.010 -7.662 -1.706 -3.830 1.816 -3.288 D 198 196 3 199 3 0 0 17 35 -6.464 -1.197 -0.856 IL 199 199 3 199 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 50 - A - - - ML 200 199 3 202 3 1 1 15 34 -9.024 -0.010 -7.679 1.818 -2.353 -2.925 -2.780 D 201 199 3 202 3 0 0 16 34 -6.174 -1.687 -0.566 IL 202 202 3 202 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 51 - A - - - ML 203 202 3 205 3 1 1 14 33 -9.024 -0.058 -4.735 1.837 -3.456 -2.133 -3.203 D 204 202 3 205 3 0 0 14 33 -6.174 -1.687 -0.566 IL 205 205 3 205 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 52 - A - - - ML 206 205 3 208 3 1 1 12 31 -8.977 -0.010 -7.631 1.762 -1.898 -2.686 -2.446 D 207 205 3 208 3 0 0 13 31 -6.879 -0.793 -1.271 IL 208 208 3 208 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 53 - A - - - ML 209 208 3 211 2 1 1 1 1 * 0.000 1.775 -2.843 -2.209 -2.178 D 210 208 3 211 2 0 0 0 0 * 0.000 IL 211 211 3 211 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 66 ] - - - - - - E 212 211 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME DUF805 ACC RF03081 DESC DUF805 RNA LENG 68 MAXL 140 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 09:44:03 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03081/CM NSEQ 46 EFFN 8.049438 CKSUM 1020549017 STATS LOCAL MSV -8.3058 0.71889 STATS LOCAL VITERBI -8.9442 0.71889 STATS LOCAL FORWARD -4.0155 0.71889 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 0.94227 1.66383 1.39679 1.75183 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 0.00000 * 1 0.91839 1.69817 2.14401 1.20186 1 a - - : 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 2 0.75086 1.79818 1.77640 1.64406 2 a - - : 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 3 0.66720 1.88270 1.96174 1.63957 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 4 0.81078 1.53913 2.16543 1.48624 4 a - - : 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 5 0.67653 2.00258 1.93628 1.54931 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 6 1.48585 2.76450 0.49124 2.31449 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 7 2.54274 2.03610 2.94482 0.30354 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 8 1.89236 3.00593 0.35324 2.32911 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 9 3.11201 4.47831 0.07057 4.40058 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 10 0.03113 4.78822 4.40822 4.59038 10 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 11 2.78773 4.41644 0.09594 4.02619 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.09438 4.78339 2.50478 1.46634 0.26236 1.09861 0.40547 12 0.86333 2.21480 2.08553 1.06471 12 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03819 4.70723 3.55986 1.46634 0.26236 2.46497 0.08884 13 2.44958 0.27041 3.58927 2.09566 13 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01859 4.68763 4.68763 1.46634 0.26236 0.15519 1.93968 14 2.09987 0.37976 3.41069 1.82957 14 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 15 0.17207 2.97815 2.69091 3.23458 15 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 16 3.17650 4.66788 0.06775 4.24195 16 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 17 0.57789 1.77012 2.26533 1.80295 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03944 3.49637 4.78339 0.48288 0.95972 1.09861 0.40547 18 0.68037 1.86348 1.75355 1.80011 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 19 0.32531 1.89242 2.76576 2.74792 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 20 4.54813 0.06715 4.37721 3.17502 21 C - - > 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 21 2.47804 0.40318 2.82757 1.66736 22 C - - > 1.38629 1.38629 1.38629 1.38629 0.03662 4.78339 3.59024 1.46634 0.26236 1.09861 0.40547 22 0.32210 3.24617 2.13325 2.13705 23 A - - > 1.38629 1.38629 1.38629 1.38629 0.01721 4.76398 4.76398 1.46634 0.26236 0.47408 0.97408 23 2.69257 0.56437 2.56691 1.24897 24 C - - > 1.38629 1.38629 1.38629 1.38629 0.03032 4.78339 3.83980 1.46634 0.26236 1.09861 0.40547 24 1.83331 2.25438 2.47018 0.42985 25 U - - - 1.38629 1.38629 1.38629 1.38629 0.01710 4.77017 4.77017 1.46634 0.26236 0.57575 0.82619 25 1.12780 1.78666 2.56256 0.84019 26 u - - - 1.38629 1.38629 1.38629 1.38629 0.03913 4.78339 3.50645 1.46634 0.26236 1.09861 0.40547 26 1.13399 1.83166 1.58189 1.16309 27 a - - - 1.38629 1.38629 1.38629 1.38629 0.18080 4.76151 1.85248 1.46634 0.26236 1.72020 0.19727 27 0.16222 2.93416 3.27256 2.83595 28 A - - - 1.38629 1.38629 1.38629 1.38629 0.52849 0.95184 3.71017 0.24477 1.52731 0.61735 0.77517 28 0.29664 2.66562 3.00924 1.98193 32 A - - - 1.38629 1.38629 1.38629 1.38629 0.01843 4.69603 4.69603 1.46634 0.26236 0.16710 1.87156 29 0.07834 3.46576 3.82929 3.79968 33 A - - - 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 30 0.07913 3.45237 3.82379 3.79157 34 A - - - 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 31 0.07717 4.16963 3.19385 4.02900 35 A - - - 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 32 3.16447 0.15214 3.60965 2.63339 36 C - - - 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 33 2.05284 3.37578 0.27158 2.58679 37 G - - - 1.38629 1.38629 1.38629 1.38629 0.09452 4.78339 2.50323 1.46634 0.26236 1.09861 0.40547 34 1.91622 3.22731 0.31849 2.45427 38 G - - - 1.38629 1.38629 1.38629 1.38629 0.05215 4.70710 3.17523 1.46634 0.26236 0.18610 1.77310 35 2.48410 3.19458 0.16524 3.57826 39 G - - < 1.38629 1.38629 1.38629 1.38629 0.01741 4.75257 4.75257 1.46634 0.26236 0.35926 1.19797 36 2.58167 3.88955 0.12722 3.75676 40 G - - < 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 37 2.07317 0.60458 2.26917 1.49383 41 C - - < 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 38 2.46767 3.78712 0.16442 3.11970 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 39 1.10204 2.02718 1.46449 1.18775 43 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 40 0.72125 1.86824 1.98563 1.50433 44 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03350 4.78339 3.70577 1.46634 0.26236 1.09861 0.40547 41 0.50279 2.66422 2.45549 1.42844 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01716 4.76704 4.76704 1.46634 0.26236 0.51927 0.90375 42 2.43488 0.47454 3.36878 1.36341 46 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 43 2.49361 0.40319 3.45089 1.52561 47 C - - _ 1.38629 1.38629 1.38629 1.38629 0.34701 1.30013 3.87726 0.06032 2.83808 1.09861 0.40547 44 2.66094 4.32001 0.10829 3.94009 49 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01709 4.77097 4.77097 1.46634 0.26236 0.59232 0.80530 45 0.10284 3.10458 3.68330 3.58471 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 46 0.09285 4.06350 2.96275 3.92206 51 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05300 4.78339 3.14071 1.46634 0.26236 1.09861 0.40547 47 0.13708 2.76067 3.51167 3.35228 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01749 4.74788 4.74788 1.46634 0.26236 0.32709 1.27662 48 0.13196 3.56599 3.05093 3.03580 53 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 49 1.74170 2.44631 0.52807 1.90768 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 50 3.91739 0.15946 3.70218 2.27463 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.04823 4.78339 3.25152 1.46634 0.26236 1.09861 0.40547 51 3.73955 0.19028 3.06950 2.27239 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.03647 4.75257 3.60520 1.46634 0.26236 0.35926 1.19797 52 0.43320 2.84870 2.94765 1.42220 57 A - - : 1.38629 1.38629 1.38629 1.38629 0.03783 4.76523 3.55420 1.46634 0.26236 0.49161 0.94583 53 1.05443 2.39838 2.03921 0.84255 58 u - - : 1.38629 1.38629 1.38629 1.38629 0.01722 4.76347 4.76347 1.46634 0.26236 0.46736 0.98525 54 0.08042 3.43056 3.81484 3.77837 59 A - - : 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 55 1.44197 1.26648 2.44021 0.92994 60 u - - : 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 56 2.71728 2.97283 0.23251 2.40521 61 G - - : 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 57 0.03113 4.78822 4.40822 4.59038 62 A - - : 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 58 3.62940 4.45996 0.07757 3.30920 63 G - - : 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 59 4.11564 3.87197 4.66710 0.04765 64 U - - : 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 60 0.03113 4.78822 4.40822 4.59038 65 A - - : 1.38629 1.38629 1.38629 1.38629 0.32175 1.32143 4.78339 0.06160 2.81778 1.09861 0.40547 61 2.05437 3.27938 0.30179 2.35726 67 G - - : 1.38629 1.38629 1.38629 1.38629 0.01688 4.78339 4.78339 1.46634 0.26236 1.09861 0.40547 62 1.39649 3.05654 0.50641 2.27467 68 G - - : 1.38629 1.38629 1.38629 1.38629 0.03330 4.78339 3.71367 1.46634 0.26236 1.09861 0.40547 63 0.31996 2.75582 1.98408 2.62059 69 A - - : 1.38629 1.38629 1.38629 1.38629 0.01715 4.76724 4.76724 1.46634 0.26236 1.59220 0.22750 64 0.92337 1.52401 1.84188 1.48515 70 a - - : 1.38629 1.38629 1.38629 1.38629 0.01715 4.76724 4.76724 1.46634 0.26236 1.59220 0.22750 65 0.47678 2.21005 2.19431 1.84460 71 A - - : 1.38629 1.38629 1.38629 1.38629 0.01715 4.76724 4.76724 1.46634 0.26236 1.59220 0.22750 66 0.65813 2.26239 2.34793 1.26404 72 A - - : 1.38629 1.38629 1.38629 1.38629 0.01715 4.76724 4.76724 1.46634 0.26236 1.59220 0.22750 67 0.92939 1.92905 2.09500 1.08812 73 a - - : 1.38629 1.38629 1.38629 1.38629 0.01715 4.76724 4.76724 1.46634 0.26236 1.59220 0.22750 68 0.79269 1.72591 2.54674 1.23434 74 a - - : 1.38629 1.38629 1.38629 1.38629 0.00861 4.75870 * 1.46634 0.26236 0.00000 * //