INFERNAL1/a [1.1.4 | Dec 2020] NAME terC ACC RF03067 DESC terC RNA STATES 184 NODES 47 CLEN 60 W 176 ALPH RNA RF no CONS yes MAP yes DATE Fri Dec 21 12:24:51 2018 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 129 EFFN 17.207611 CKSUM 203673858 NULL 0.000 0.000 0.000 0.000 GA 39.90 TC 39.90 NC 39.50 EFP7GF -22.2774 0.71934 ECMLC 0.53862 -6.36733 3.28542 1600000 217347 0.005521 ECMGC 0.41906 -17.30059 -4.19738 1600000 97006 0.004123 ECMLI 0.53153 -5.23330 3.75903 1600000 142878 0.008399 ECMGI 0.43209 -13.70670 -1.52924 1600000 77126 0.005186 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 176 306 -9.365 -9.572 -0.010 -7.986 IL 1 1 2 1 4 1 17 178 308 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 178 308 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - g - - - ML 3 2 3 5 3 1 17 176 306 -10.294 -0.004 -8.948 0.052 -0.004 0.354 -0.540 D 4 2 3 5 3 0 9 174 304 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 16 177 307 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 1 16 175 305 -10.294 -0.004 -8.948 0.192 0.025 -0.134 -0.107 D 7 5 3 8 3 0 8 173 303 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 15 176 306 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - u - - - ML 9 8 3 11 3 1 15 174 304 -10.294 -0.004 -8.948 0.206 -0.605 -0.113 0.339 D 10 8 3 11 3 0 6 172 302 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 14 175 305 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - g - - - ML 12 11 3 14 3 1 14 173 303 -10.294 -0.004 -8.948 -0.736 -0.044 0.515 0.001 D 13 11 3 14 3 0 6 171 301 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 12 174 304 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - c - - - ML 15 14 3 17 3 1 13 172 302 -10.607 -0.004 -8.925 -0.985 0.804 0.157 -0.658 D 16 14 3 17 3 0 5 171 301 -5.620 -0.734 -1.403 IL 17 17 3 17 3 1 10 173 303 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 105 - g - - MR 18 17 3 20 3 1 12 171 301 -10.607 -0.004 -8.925 -0.565 -0.671 0.943 -0.371 D 19 17 3 20 3 0 4 169 299 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 9 172 302 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 104 - c - - MR 21 20 3 23 3 1 11 170 300 -10.607 -0.004 -8.925 -0.876 0.563 -0.003 -0.030 D 22 20 3 23 3 0 4 168 298 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 8 171 301 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 103 - u - - MR 24 23 3 26 3 1 10 169 299 -10.607 -0.004 -8.925 -0.184 0.020 -2.255 0.923 D 25 23 3 26 3 0 3 167 297 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 7 170 300 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 102 - a - - MR 27 26 3 29 3 1 9 168 298 -10.607 -0.004 -8.925 0.932 -0.176 -1.476 -0.239 D 28 26 3 29 3 0 2 166 296 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 6 169 299 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 101 - C - - MR 30 29 3 32 3 1 9 167 297 -10.607 -0.004 -8.925 -0.863 1.031 -0.277 -0.780 D 31 29 3 32 3 0 1 165 295 -6.390 -1.568 -0.620 IR 32 32 3 32 3 1 5 168 298 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 100 - G - - MR 33 32 3 35 5 1 8 166 296 -9.268 -0.009 -9.084 -9.296 -10.188 -1.068 -0.085 1.002 -0.793 D 34 32 3 35 5 0 1 164 294 -5.352 -0.707 -2.978 -4.409 -2.404 IR 35 35 3 35 5 1 5 166 296 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 6 99 G C - - MP 36 35 3 40 6 2 8 165 295 -10.517 -10.456 -0.013 -9.232 -9.512 -7.801 -4.698 -3.358 -0.933 1.411 -5.621 -5.124 -0.725 -5.205 -3.689 3.277 -3.780 0.037 -0.406 -4.383 -2.054 -3.493 ML 37 35 3 40 6 1 3 163 293 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 3 40 6 1 3 163 293 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 3 40 6 0 0 158 288 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 4 165 295 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 4 164 294 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 7 98 G C - - MP 42 41 6 46 6 2 8 163 294 -6.300 -10.451 -0.094 -4.404 -9.507 -9.902 -4.628 -2.210 -4.479 1.362 -5.376 -5.096 0.695 -5.099 -3.540 3.093 -5.151 -0.633 0.873 -4.358 -2.591 -3.451 ML 43 41 6 46 6 1 2 162 292 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 2 161 291 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 0 157 287 -9.256 -7.955 -3.752 -4.434 -2.476 -0.527 IL 46 46 5 46 6 1 4 163 293 -2.971 -3.234 -0.540 -4.889 -5.665 -5.326 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 4 162 292 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 9 97 u a - - MP 48 47 6 52 6 2 8 162 292 -10.444 -10.384 -0.008 -9.160 -9.440 -9.835 1.270 -2.436 -2.420 0.443 -1.359 -3.272 0.811 -2.156 0.764 0.413 -1.939 0.519 1.748 -2.561 -0.280 -1.688 ML 49 47 6 52 6 1 3 160 290 -7.631 -7.977 -0.376 -2.385 -7.826 -5.356 1.118 -1.069 -0.742 -0.406 MR 50 47 6 52 6 1 2 159 289 -7.132 -5.861 -1.363 -5.840 -0.973 -4.053 0.681 -0.599 -0.305 -0.109 D 51 47 6 52 6 0 0 154 285 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 3 161 291 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 3 160 290 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 10 96 C G - - MP 54 53 6 58 6 2 8 160 290 -10.517 -10.456 -0.008 -9.232 -9.512 -9.907 -6.999 -7.168 0.804 -3.344 -4.825 -6.622 3.642 -5.716 -6.491 -3.275 -0.783 -5.358 -0.592 -6.894 -2.515 -5.292 ML 55 53 6 58 6 1 2 157 287 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 2 157 287 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 0 153 283 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 3 159 289 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 3 158 289 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 11 95 C G - - MP 60 59 6 64 6 2 7 158 288 -10.517 -10.456 -0.008 -9.232 -9.512 -9.907 -9.105 -9.318 -7.613 -5.641 -5.917 -7.414 3.980 -7.795 -8.613 -5.617 -7.454 -7.671 -3.616 -9.012 -4.593 -7.415 ML 61 59 6 64 6 1 1 156 286 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 1 155 285 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 152 282 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 2 157 287 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 3 157 287 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 12 94 G C - - MP 66 65 6 70 6 2 6 156 286 -10.517 -6.264 -0.026 -9.232 -9.512 -9.907 -8.268 -5.082 -9.916 -2.483 -9.804 -6.294 -4.286 -9.628 -6.438 3.955 -6.648 -2.984 -4.652 -6.734 -6.672 -8.797 ML 67 65 6 70 6 1 1 154 284 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 153 283 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 151 281 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 2 155 285 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 2 155 285 -2.665 -0.403 -6.176 -4.344 -5.450 0.000 0.000 0.000 0.000 [ MATP 18 ] 13 92 G U - - MP 72 71 6 76 4 2 4 154 284 -9.365 -9.572 -0.023 -6.274 -6.185 -4.849 -6.377 -0.758 -8.408 -9.603 -3.884 -6.413 -5.939 -0.996 -6.606 3.869 -3.861 -7.675 -5.725 -4.977 ML 73 71 6 76 4 1 1 153 283 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 4 1 1 152 282 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 75 71 6 76 4 0 0 150 280 -4.568 -4.250 -2.265 -0.520 IL 76 76 5 76 4 1 1 153 283 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 77 77 6 77 3 1 1 153 283 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 14 - G - - - ML 78 77 6 80 3 1 3 152 282 -10.282 -0.004 -8.936 -3.416 -5.303 1.917 -3.244 D 79 77 6 80 3 0 0 149 280 -6.671 -0.967 -1.063 IL 80 80 3 80 3 1 1 152 282 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 15 - C - - - ML 81 80 3 83 3 1 2 151 281 -10.294 -0.004 -8.948 -5.621 1.974 -6.090 -4.729 D 82 80 3 83 3 0 0 148 278 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 1 151 281 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 16 - C - - - ML 84 83 3 86 3 1 2 150 280 -10.294 -0.010 -7.406 -5.200 1.948 -5.655 -3.394 D 85 83 3 86 3 0 0 147 277 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 1 150 280 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 17 - C - - - ML 87 86 3 89 3 1 2 149 279 -10.289 -0.004 -8.943 -5.616 1.973 -6.085 -4.723 D 88 86 3 89 3 0 0 146 276 -6.413 -1.266 -0.805 IL 89 89 3 89 3 1 1 149 279 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 18 - C - - - ML 90 89 3 92 3 1 2 148 278 -10.294 -0.004 -8.948 -4.962 1.914 -5.493 -2.490 D 91 89 3 92 3 0 0 145 275 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 148 278 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 19 - U - - - ML 93 92 3 95 3 1 1 147 277 -10.294 -0.004 -8.948 -5.386 -4.911 -6.226 1.974 D 94 92 3 95 3 0 0 144 274 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 1 147 277 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 20 - C - - - ML 96 95 3 98 3 1 1 146 276 -10.294 -0.004 -8.948 -5.621 1.974 -6.090 -4.729 D 97 95 3 98 3 0 0 143 273 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 146 276 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 21 - U - - - ML 99 98 3 101 3 1 1 145 275 -6.144 -0.024 -8.948 -5.386 -4.911 -6.226 1.974 D 100 98 3 101 3 0 0 142 272 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 145 275 -1.651 -0.661 -4.351 0.000 0.000 0.000 0.000 [ MATL 27 ] 23 - G - - - ML 102 101 3 104 3 1 1 144 274 -10.607 -0.004 -8.925 -4.648 -4.557 1.961 -5.326 D 103 101 3 104 3 0 0 142 272 -5.620 -0.734 -1.403 IL 104 104 3 104 3 1 1 144 274 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 91 - G - - MR 105 104 3 107 3 1 1 143 273 -10.607 -0.004 -8.925 -5.019 -6.671 1.979 -5.760 D 106 104 3 107 3 0 0 140 270 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 1 143 273 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 90 - U - - MR 108 107 3 110 3 1 1 142 272 -10.607 -0.004 -8.925 -5.386 -4.911 -6.226 1.974 D 109 107 3 110 3 0 0 139 269 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 1 142 272 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 89 - A - - MR 111 110 3 113 3 1 1 141 271 -10.607 -0.004 -8.925 1.982 -6.244 -5.635 -5.847 D 112 110 3 113 3 0 0 138 268 -6.390 -1.568 -0.620 IR 113 113 3 113 3 1 1 141 271 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 88 - G - - MR 114 113 3 116 5 1 1 140 270 -9.268 -0.009 -9.084 -9.296 -10.188 -3.811 -2.075 1.865 -4.389 D 115 113 3 116 5 0 0 137 267 -5.352 -0.707 -2.978 -4.409 -2.404 IR 116 116 3 116 5 1 1 139 270 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 24 87 g c - - MP 117 116 3 121 6 2 2 139 269 -10.517 -10.456 -0.008 -9.232 -9.512 -9.907 -5.564 0.270 -5.537 1.221 -6.946 -6.591 -2.089 -5.956 -5.566 2.708 -6.006 2.392 -2.290 -5.741 -4.066 -4.359 ML 118 116 3 121 6 1 1 136 266 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 3 121 6 1 1 136 266 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 3 121 6 0 0 130 260 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 138 268 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 137 268 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 25 86 C G - - MP 123 122 6 127 6 2 2 137 267 -10.517 -10.456 -0.008 -9.232 -9.512 -9.907 -7.090 -7.301 -6.462 -3.474 -4.842 -6.642 3.818 -2.010 -6.551 -3.407 -6.694 -5.552 -0.423 -6.957 -0.809 -5.346 ML 124 122 6 127 6 1 1 134 264 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 134 264 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 128 258 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 136 266 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 135 266 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 26 85 G C - - MP 129 128 6 133 6 2 2 135 265 -10.517 -10.456 -0.014 -9.232 -9.512 -7.636 -5.245 -3.792 -5.122 1.510 -6.285 -5.609 -0.778 -5.744 -5.334 3.444 -5.618 -0.077 -1.609 -4.959 -3.363 -4.057 ML 130 128 6 133 6 1 1 132 262 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 132 262 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 126 256 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 134 264 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 133 264 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 27 84 g c - - MP 135 134 6 139 6 2 2 133 263 -5.361 -10.450 -0.070 -5.977 -9.506 -7.713 -3.288 -3.024 -3.398 2.195 -3.516 -2.196 0.463 -0.274 -3.536 2.248 -4.038 -0.880 1.254 -3.468 -0.987 -2.561 ML 136 134 6 139 6 1 1 131 261 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 129 259 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 124 254 -9.287 -7.985 -2.154 -4.464 -4.482 -0.557 IL 139 139 5 139 6 1 1 132 262 -1.833 -3.850 -0.740 -5.505 -6.282 -5.942 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 131 262 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 30 83 g c - - MP 141 140 6 145 6 2 2 131 261 -2.879 -5.154 -0.330 -9.206 -9.486 -4.735 -2.614 -2.754 -1.769 0.834 -2.728 -3.641 1.522 -2.689 -2.861 1.902 -3.424 0.287 1.473 -2.931 0.881 -1.257 ML 142 140 6 145 6 1 1 129 259 -2.340 -7.181 -1.275 -1.589 -7.030 -4.560 0.400 -0.003 -0.640 0.058 MR 143 140 6 145 6 1 1 127 257 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 118 248 -9.271 -7.969 -3.766 -4.449 -4.466 -0.269 IL 145 145 5 145 6 1 1 131 261 -1.652 -1.073 -2.390 -7.221 -7.997 -7.657 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 129 260 -4.107 -0.136 -7.618 -5.786 -6.892 0.000 0.000 0.000 0.000 [ MATP 37 ] 33 81 c g - - MP 147 146 6 151 6 2 2 129 259 -10.458 -10.398 -0.114 -6.053 -7.380 -4.223 -3.405 -3.370 -3.541 1.497 -3.256 -4.372 2.066 -3.691 -3.583 1.865 -4.124 -0.814 1.104 -3.669 0.403 -0.787 ML 148 146 6 151 6 1 1 127 257 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 125 255 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 113 243 -10.523 -9.221 -5.018 -5.700 -5.718 -0.107 IL 151 151 5 151 6 1 1 128 258 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 128 258 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 34 80 g c - - MP 153 152 6 157 6 2 2 127 257 -10.353 -10.292 -0.127 -5.972 -9.349 -3.934 -2.656 -2.669 -2.819 1.288 -0.371 -3.646 1.709 -3.170 -2.911 2.196 -1.675 0.415 0.572 -2.160 -0.858 -2.039 ML 154 152 6 157 6 1 1 125 255 -6.788 -7.134 -0.764 -1.543 -6.984 -4.514 -0.159 -0.482 -0.776 0.852 MR 155 152 6 157 6 1 1 121 252 -7.170 -5.899 -1.306 -5.877 -1.011 -4.091 0.132 0.148 -0.546 0.151 D 156 152 6 157 6 0 0 109 239 -11.383 -10.082 -5.879 -6.561 -6.578 -0.058 IL 157 157 5 157 6 1 1 126 256 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 126 256 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 35 79 c g - - MP 159 158 6 163 4 2 2 125 255 -1.205 -2.478 -1.390 -7.649 -2.248 -2.446 -1.433 1.270 -0.662 -3.292 1.817 -2.110 -2.503 1.404 -3.074 -0.215 1.309 -2.582 0.656 -1.689 ML 160 158 6 163 4 1 1 121 252 -1.719 -4.352 -0.919 -3.082 0.482 -0.527 -0.568 0.304 MR 161 158 6 163 4 1 1 109 239 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 162 158 6 163 4 0 0 107 237 -7.414 -2.724 -0.423 -3.366 IL 163 163 5 163 4 1 1 129 259 -0.286 -2.557 -6.772 -10.510 0.000 0.000 0.000 0.000 IR 164 164 6 164 3 1 1 120 250 -0.204 -2.933 -9.816 0.000 0.000 0.000 0.000 [ MATL 40 ] 46 - u - - - ML 165 164 6 167 3 1 1 17 35 -10.294 -0.004 -8.948 -0.627 -0.726 0.418 0.497 D 166 164 6 167 3 0 0 17 36 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 47 - u - - - ML 168 167 3 170 3 1 1 16 34 -10.294 -0.004 -8.948 -0.235 0.001 -0.461 0.509 D 169 167 3 170 3 0 0 16 35 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 48 - c - - - ML 171 170 3 173 3 1 1 14 33 -10.294 -0.041 -5.199 -0.353 0.569 -0.418 -0.022 D 172 170 3 173 3 0 0 15 34 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 49 - c - - - ML 174 173 3 176 3 1 1 13 32 -10.258 -0.495 -1.788 -0.038 0.132 -0.126 0.019 D 175 173 3 176 3 0 0 14 32 -7.293 -2.133 -0.385 IL 176 176 3 176 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 50 - c - - - ML 177 176 3 179 3 1 1 12 30 -9.777 -0.189 -3.038 -0.345 0.844 -0.247 -0.800 D 178 176 3 179 3 0 0 11 29 -10.083 -5.596 -0.032 IL 179 179 3 179 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 51 - c - - - ML 180 179 3 182 2 1 1 1 1 * 0.000 0.217 0.314 -0.240 -0.419 D 181 179 3 182 2 0 0 0 0 * 0.000 IL 182 182 3 182 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 46 ] - - - - - - E 183 182 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME terC ACC RF03067 DESC terC RNA LENG 60 MAXL 194 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Dec 21 12:24:51 2018 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED NSEQ 129 EFFN 115.327606 CKSUM 203673858 STATS LOCAL MSV -8.2275 0.71934 STATS LOCAL VITERBI -8.4990 0.71934 STATS LOCAL FORWARD -3.8992 0.71934 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.90921 1.14965 1.11609 1.57263 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 0.00000 * 1 1.40435 1.29355 1.03014 2.09378 1 g - - : 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 2 1.27768 1.28106 1.41309 1.60853 2 a - - : 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 3 1.26876 1.87661 1.39606 1.14526 3 u - - : 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 4 2.31585 1.34213 0.90244 1.45050 4 g - - : 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 5 2.50663 0.69552 1.17231 2.20735 5 c - - : 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 6 1.58239 4.63994 0.29963 3.12885 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.00636 7.17931 5.18816 1.46634 0.26236 1.09861 0.40547 7 1.80860 2.29022 0.50992 2.00747 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.01854 4.03966 7.17448 0.08485 2.50897 2.23258 0.11345 8 1.13935 2.73971 1.05247 1.32309 9 g - - < 1.38629 1.38629 1.38629 1.38629 0.00153 7.17448 7.17448 1.46634 0.26236 0.24144 1.53943 9 2.11668 0.20842 3.19777 3.61755 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 10 6.96253 0.00274 7.10234 6.93901 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 11 5.79302 6.82280 0.00528 6.78672 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 12 4.18457 6.84196 0.01806 6.43938 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.01123 7.17931 4.56566 1.46634 0.26236 1.09861 0.40547 13 4.31310 7.24846 0.03912 3.71878 14 G - - - 1.38629 1.38629 1.38629 1.38629 0.00154 7.16962 7.16962 1.46634 0.26236 0.13674 2.05725 14 7.37413 0.00240 7.73916 6.61621 15 C - - - 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 15 6.81055 0.01926 7.07102 4.06738 16 C - - - 1.38629 1.38629 1.38629 1.38629 0.00576 7.17931 5.30172 1.46634 0.26236 1.09861 0.40547 16 7.36879 0.00242 7.73353 6.61147 17 C - - - 1.38629 1.38629 1.38629 1.38629 0.00153 7.17508 7.17508 1.46634 0.26236 0.26691 1.45135 17 6.78677 0.04351 7.05777 3.20424 18 C - - - 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 18 8.08419 7.32849 8.94542 0.00110 19 U - - - 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 19 7.37413 0.00240 7.73916 6.61621 20 C - - - 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 20 8.08419 7.32849 8.94542 0.00110 21 U - - - 1.38629 1.38629 1.38629 1.38629 0.01620 4.17971 7.17931 0.09680 2.38313 1.09861 0.40547 21 6.56397 4.62603 0.01213 7.07026 23 G - - - 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 22 1.51709 6.96197 0.25064 6.57072 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 23 6.73326 0.06436 6.66312 2.81574 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 24 1.69612 3.94728 0.23006 5.87475 26 G - - < 1.38629 1.38629 1.38629 1.38629 0.00713 7.17931 5.05999 1.46634 0.26236 1.09861 0.40547 25 1.00346 2.02538 1.11571 1.75006 27 a - - < 1.38629 1.38629 1.38629 1.38629 0.04074 3.38318 5.11893 0.52087 0.90140 0.21529 1.64147 26 2.25770 1.74137 0.96631 1.07985 30 g - - < 1.38629 1.38629 1.38629 1.38629 0.28790 1.61465 2.97200 0.42758 1.05581 2.28290 0.10757 27 1.62147 1.27032 1.26081 1.43455 33 g - - < 1.38629 1.38629 1.38629 1.38629 0.08647 7.12236 2.50066 1.46634 0.26236 4.32589 0.01331 28 1.90744 1.23326 0.71083 2.67420 34 g - - < 1.38629 1.38629 1.38629 1.38629 0.09905 7.03764 2.37061 1.46634 0.26236 2.96616 0.05287 29 1.70393 1.17764 1.40094 1.33309 35 c - - < 1.38629 1.38629 1.38629 1.38629 0.66713 0.72184 6.94832 1.77473 0.18576 0.00734 4.91853 30 2.19894 1.98706 0.96909 0.98738 46 g - - _ 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 31 1.72037 1.32020 1.70058 0.99064 47 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 32 1.81536 0.86062 1.64169 1.51110 48 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02941 7.17931 3.56791 1.46634 0.26236 1.09861 0.40547 33 1.51043 1.19267 1.40049 1.47274 49 c - - _ 1.38629 1.38629 1.38629 1.38629 0.37915 7.15147 1.15590 1.46634 0.26236 1.76622 0.18751 34 1.82442 0.60359 1.47627 2.75895 50 C - - _ 1.38629 1.38629 1.38629 1.38629 0.10150 6.78107 2.34983 1.46634 0.26236 1.63084 0.21786 35 1.25589 0.97697 1.48939 2.17844 51 c - - _ 1.38629 1.38629 1.38629 1.38629 1.62552 0.25670 3.52027 2.16762 0.12155 0.68172 0.70470 36 1.64243 1.62785 0.93771 1.52043 79 g - - > 1.38629 1.38629 1.38629 1.38629 0.05331 6.97994 2.97627 1.46634 0.26236 0.84464 0.56162 37 2.23484 0.96136 1.36602 1.36455 80 c - - > 1.38629 1.38629 1.38629 1.38629 0.00178 7.02398 7.02398 1.46634 0.26236 0.49302 0.94361 38 2.26866 1.35840 0.98645 1.32208 81 g - - > 1.38629 1.38629 1.38629 1.38629 0.26534 1.55458 3.82693 0.00762 4.88072 0.12377 2.15056 39 1.74121 1.22612 1.10312 1.61230 83 g - - > 1.38629 1.38629 1.38629 1.38629 0.00732 7.15400 5.03467 1.46634 0.26236 0.05750 2.88463 40 1.86272 1.10977 2.88985 0.77755 84 u - - > 1.38629 1.38629 1.38629 1.38629 0.00153 7.17371 7.17371 1.46634 0.26236 0.21529 1.64147 41 6.09247 0.29916 3.92357 1.44169 85 C - - > 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 42 3.47084 6.80311 0.05069 4.06156 86 G - - > 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 43 6.76140 0.71915 6.73262 0.67239 87 U - - > 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 44 6.51333 2.66828 0.07450 6.96990 88 G - - - 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 45 0.00210 7.61266 7.08719 7.16875 89 A - - - 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 46 8.08419 7.32849 8.94542 0.00110 90 U - - - 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 47 6.57539 7.80467 0.00263 7.10333 91 G - - - 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 48 6.48885 4.24640 6.57457 0.01738 92 U - - > 1.38629 1.38629 1.38629 1.38629 0.01893 4.01805 7.17931 0.08269 2.53370 1.09861 0.40547 49 6.84507 0.00625 6.79289 5.51047 94 C - - > 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 50 6.58037 7.36362 0.00251 7.63706 95 G - - > 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 51 3.68517 6.61969 0.02863 6.31901 96 G - - > 1.38629 1.38629 1.38629 1.38629 0.06734 7.17931 2.74327 1.46634 0.26236 1.09861 0.40547 52 0.28457 3.65649 2.57289 1.92741 97 A - - > 1.38629 1.38629 1.38629 1.38629 0.00680 7.11360 5.12245 1.46634 0.26236 0.02341 3.76630 53 1.99152 0.53319 2.26988 1.75183 98 C - - > 1.38629 1.38629 1.38629 1.38629 0.00153 7.17448 7.17448 1.46634 0.26236 0.24144 1.53943 54 3.30379 0.39059 2.65221 1.53199 99 C - - > 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 55 2.57716 1.32770 0.60908 2.16217 100 G - - : 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 56 2.28111 0.54268 1.49218 2.38859 101 C - - : 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 57 0.64276 1.46026 2.82107 1.70133 102 A - - : 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 58 1.55846 1.35232 4.01222 0.66786 103 U - - : 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 59 2.46180 0.87597 1.28419 1.50784 104 c - - : 1.38629 1.38629 1.38629 1.38629 0.00153 7.17931 7.17931 1.46634 0.26236 1.09861 0.40547 60 2.00364 1.85232 0.62626 1.75044 105 G - - : 1.38629 1.38629 1.38629 1.38629 0.00076 7.17855 * 1.46634 0.26236 0.00000 * //