INFERNAL1/a [1.1.5 | Sep 2023] NAME sul1 ACC RF03058 DESC sul1 RNA STATES 177 NODES 49 CLEN 56 W 81 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 16 18:13:25 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03058/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 54 EFFN 6.726929 CKSUM 4144046634 NULL 0.000 0.000 0.000 0.000 GA 36.20 TC 36.40 NC 36.10 EFP7GF -14.8466 0.71923 ECMLC 0.56610 -9.50658 0.86232 1600000 425049 0.002823 ECMGC 0.37602 -19.38417 -4.36508 1600000 113434 0.003526 ECMLI 0.52583 -8.70828 1.86033 1600000 310955 0.003859 ECMGI 0.39018 -15.94503 -2.06262 1600000 90044 0.004442 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 81 108 -8.188 -8.395 -0.022 -6.809 IL 1 1 2 1 4 1 19 83 110 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 19 83 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 19 81 108 -9.144 -0.009 -7.798 -0.445 1.044 -1.152 -0.409 D 4 2 3 5 3 0 14 79 106 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 18 82 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 1 18 80 107 -9.144 -0.009 -7.798 0.590 -0.203 -1.534 0.357 D 7 5 3 8 3 0 14 78 105 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 17 81 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - u - - - ML 9 8 3 11 3 1 17 79 106 -9.144 -0.009 -7.798 -0.107 0.065 -1.059 0.628 D 10 8 3 11 3 0 13 77 104 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 17 80 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 16 78 105 -9.144 -0.009 -7.798 -3.680 -5.138 1.944 -4.419 D 13 11 3 14 3 0 13 76 103 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 16 79 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - G - - - ML 15 14 3 17 3 1 15 77 104 -9.481 -0.009 -7.798 -1.731 -3.976 1.825 -3.435 D 16 14 3 17 3 0 12 75 102 -5.620 -0.734 -1.403 IL 17 17 3 17 3 1 15 77 104 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 68 - c - - MR 18 17 3 20 3 1 14 76 103 -9.481 -0.009 -7.798 -0.552 0.416 0.153 -0.198 D 19 17 3 20 3 0 11 74 101 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 14 76 103 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 67 - C - - MR 21 20 3 23 3 1 13 75 102 -9.481 -0.009 -7.798 -0.316 1.068 -2.193 -0.182 D 22 20 3 23 3 0 10 73 100 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 13 75 102 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 66 - A - - MR 24 23 3 26 3 1 12 74 101 -9.481 -0.009 -7.798 1.647 -1.371 -2.034 -2.081 D 25 23 3 26 3 0 10 72 99 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 12 74 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 65 - A - - MR 27 26 3 29 3 1 11 73 100 -9.481 -0.009 -7.798 1.202 -0.224 -1.934 -0.783 D 28 26 3 29 3 0 9 71 98 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 11 73 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 64 - c - - MR 30 29 3 32 2 1 10 72 99 -9.690 -0.002 -0.396 0.863 -0.744 -0.279 D 31 29 3 32 2 0 9 71 98 -4.432 -0.068 IR 32 32 3 32 2 1 10 72 99 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 11 ] - - - - - - B 33 32 3 34 93 0 9 71 98 [ BEGL 12 ] - - - - - - S 34 33 1 35 4 0 0 44 71 -0.026 -7.589 -6.996 -7.636 [ MATP 13 ] 6 36 A U - - MP 35 34 1 39 6 2 2 44 71 -9.711 -9.651 -0.014 -8.427 -8.707 -9.102 -5.262 -3.949 -5.254 3.760 -7.257 -8.300 -2.763 -5.274 -5.035 -0.529 -5.689 0.199 -2.801 -6.622 -4.625 -3.988 ML 36 34 1 39 6 1 1 42 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 37 34 1 39 6 1 1 42 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 38 34 1 39 6 0 0 39 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 39 39 5 39 6 1 1 43 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 40 40 6 40 5 1 1 43 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 7 35 C G - - MP 41 40 6 45 6 2 2 42 69 -5.541 -9.651 -0.044 -8.427 -8.707 -9.102 -4.532 -4.408 -4.437 -0.437 -1.475 -5.083 3.309 -4.004 -4.387 0.267 -4.815 -2.199 1.235 -4.684 -0.402 -3.191 ML 42 40 6 45 6 1 1 40 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 43 40 6 45 6 1 1 40 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 44 40 6 45 6 0 0 37 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 45 45 5 45 6 1 1 41 68 -2.961 -3.224 -0.545 -4.879 -5.655 -5.315 0.000 0.000 0.000 0.000 IR 46 46 6 46 5 1 1 41 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 9 34 C G - - MP 47 46 6 51 6 2 2 40 67 -9.711 -9.651 -0.014 -8.427 -8.707 -9.102 -5.642 -5.722 -5.159 -1.819 -3.636 -5.441 3.634 -4.501 -5.210 -1.693 -5.423 -3.758 0.491 -5.590 0.221 -4.002 ML 48 46 6 51 6 1 1 38 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 49 46 6 51 6 1 1 38 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 50 46 6 51 6 0 0 35 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 51 51 5 51 6 1 1 39 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 52 52 6 52 5 1 1 39 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 10 33 C G - - MP 53 52 6 57 6 2 2 38 65 -9.711 -9.651 -0.030 -6.187 -8.707 -9.102 -5.983 -5.990 -2.693 -2.089 -4.135 -5.876 3.785 -5.063 -5.665 -1.934 -5.802 -3.945 -0.172 -6.011 -1.402 -4.469 ML 54 52 6 57 6 1 1 36 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 55 52 6 57 6 1 1 36 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 56 52 6 57 6 0 0 33 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 57 57 5 57 6 1 1 37 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 58 58 6 58 5 1 1 37 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 11 32 G C - - MP 59 58 6 63 6 2 2 36 63 -9.696 -9.635 -0.014 -8.412 -8.691 -9.086 -6.831 -4.147 -7.534 -1.326 -8.043 -5.478 -2.891 -7.653 -5.499 3.898 -5.739 -1.979 -3.252 -5.764 -5.110 -6.384 ML 60 58 6 63 6 1 1 34 61 -6.535 -6.881 -0.971 -1.290 -6.731 -4.261 0.066 0.265 -0.622 0.140 MR 61 58 6 63 6 1 1 34 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 62 58 6 63 6 0 0 31 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 63 63 5 63 6 1 1 35 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 64 64 6 64 5 1 1 35 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 12 31 G C - - MP 65 64 6 69 4 2 2 34 61 -1.667 -5.925 -0.996 -2.581 -3.930 -2.756 -3.814 0.983 -4.571 -4.441 0.614 -4.387 -1.578 3.169 -4.464 0.108 0.177 -3.713 -1.890 -2.796 ML 66 64 6 69 4 1 1 32 59 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 67 64 6 69 4 1 1 32 59 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 68 64 6 69 4 0 0 29 56 -12.737 -14.007 -2.036 -0.404 IL 69 69 5 69 4 1 1 33 60 -3.292 -0.790 -1.849 -4.583 0.000 0.000 0.000 0.000 IR 70 70 6 70 3 1 1 32 59 -3.480 -0.166 -5.718 0.000 0.000 0.000 0.000 [ MATR 19 ] - 29 - c - - MR 71 70 6 73 5 1 1 31 58 -7.949 -0.041 -7.764 -7.977 -6.011 -1.672 0.974 -2.575 0.636 D 72 70 6 73 5 0 0 28 55 -6.658 -2.013 -4.285 -5.716 -0.573 IR 73 73 3 73 5 1 1 31 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 15 28 c g - - MP 74 73 3 78 4 2 2 30 57 -3.128 -4.139 -0.290 -6.547 -1.784 -1.446 -1.978 1.044 -1.955 -2.823 1.427 -2.316 -2.043 1.041 -2.610 -0.304 1.318 -0.294 0.437 0.849 ML 75 73 3 78 4 1 1 28 55 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 76 73 3 78 4 1 1 27 54 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 77 73 3 78 4 0 0 25 52 -6.323 -2.550 -0.713 -2.275 IL 78 78 5 78 4 1 1 31 58 -0.989 -1.531 -2.841 -6.579 0.000 0.000 0.000 0.000 IR 79 79 6 79 3 1 1 25 48 -1.139 -0.928 -5.612 0.000 0.000 0.000 0.000 [ MATL 21 ] 19 - G - - - ML 80 79 6 82 3 1 1 15 34 -9.144 -0.009 -7.798 -1.028 -0.642 1.025 -0.261 D 81 79 6 82 3 0 0 16 34 -6.174 -1.687 -0.566 IL 82 82 3 82 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 20 - u - - - ML 83 82 3 85 3 1 1 14 32 -9.144 -0.009 -7.798 -0.140 0.437 -1.410 0.446 D 84 82 3 85 3 0 0 15 33 -6.174 -1.687 -0.566 IL 85 85 3 85 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 21 - a - - - ML 86 85 3 88 3 1 1 12 31 -9.144 -0.009 -7.798 0.429 -0.802 0.027 0.086 D 87 85 3 88 3 0 0 13 32 -6.174 -1.687 -0.566 IL 88 88 3 88 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 22 - A - - - ML 89 88 3 91 2 1 1 1 1 * 0.000 1.138 -1.764 -0.271 -0.564 D 90 88 3 91 2 0 0 0 0 * 0.000 IL 91 91 3 91 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 25 ] - - - - - - E 92 91 3 -1 0 0 0 0 0 [ BEGR 26 ] - - - - - - S 93 33 1 94 3 0 0 41 59 -9.144 -0.009 -7.798 IL 94 94 2 94 3 1 1 44 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 37 - G - - - ML 95 94 2 97 3 1 1 41 59 -9.144 -0.009 -7.798 -3.680 -5.138 1.944 -4.419 D 96 94 2 97 3 0 0 40 59 -6.174 -1.687 -0.566 IL 97 97 3 97 3 1 1 43 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 38 - G - - - ML 98 97 3 100 3 1 1 39 58 -9.144 -0.009 -7.798 -3.680 -5.138 1.944 -4.419 D 99 97 3 100 3 0 0 39 58 -6.174 -1.687 -0.566 IL 100 100 3 100 3 1 1 42 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 39 - C - - - ML 101 100 3 103 3 1 1 38 57 -9.144 -0.009 -7.798 -4.230 1.930 -4.880 -3.302 D 102 100 3 103 3 0 0 37 56 -6.174 -1.687 -0.566 IL 103 103 3 103 3 1 1 41 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 40 - U - - - ML 104 103 3 106 3 1 1 37 56 -9.144 -0.009 -7.798 -2.128 -2.175 -1.565 1.683 D 105 103 3 106 3 0 0 36 55 -6.174 -1.687 -0.566 IL 106 106 3 106 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 41 - c - - - ML 107 106 3 109 3 1 1 36 55 -9.144 -0.009 -7.798 0.372 0.794 -1.673 -0.602 D 108 106 3 109 3 0 0 35 54 -6.174 -1.687 -0.566 IL 109 109 3 109 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 42 - U - - - ML 110 109 3 112 5 1 1 35 54 -8.167 -0.018 -7.982 -8.194 -9.086 -1.282 -0.677 -0.866 1.272 D 111 109 3 112 5 0 0 34 53 -4.959 -0.803 -4.221 -2.596 -2.508 IL 112 112 3 112 5 1 1 36 54 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 43 63 u a - - MP 113 112 3 117 6 2 2 34 53 -9.711 -9.651 -0.014 -8.427 -8.707 -9.102 -2.440 -2.575 -2.609 0.607 -2.382 -3.455 1.869 -2.813 -0.307 0.878 -3.209 -1.008 2.377 -1.390 -0.395 -1.764 ML 114 112 3 117 6 1 1 33 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 115 112 3 117 6 1 1 33 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 116 112 3 117 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 117 117 5 117 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 118 118 6 118 5 1 1 34 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 44 62 C G - - MP 119 118 6 123 6 2 2 32 51 -9.711 -9.651 -0.014 -8.427 -8.707 -9.102 -7.083 -7.202 -6.281 -3.407 -4.666 -6.363 3.920 -5.795 -6.571 -3.363 -6.389 -5.344 -1.574 -6.994 -2.600 -5.374 ML 120 118 6 123 6 1 1 31 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 121 118 6 123 6 1 1 31 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 122 118 6 123 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 123 123 5 123 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 124 124 6 124 5 1 1 32 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 45 61 C G - - MP 125 124 6 129 6 2 2 30 49 -9.711 -9.651 -0.014 -8.427 -8.707 -9.102 -5.615 -5.676 -5.142 -1.765 -3.625 -5.434 3.579 -4.484 -5.187 -1.638 -5.407 -3.684 1.376 -5.571 -1.289 -3.978 ML 126 124 6 129 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 127 124 6 129 6 1 1 29 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 128 124 6 129 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 129 129 5 129 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 130 130 6 130 5 1 1 30 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 46 60 G C - - MP 131 130 6 135 6 2 2 28 47 -9.711 -9.651 -0.014 -8.427 -8.707 -9.102 -4.306 -3.052 -4.156 0.556 -4.705 -4.750 0.575 -1.369 -4.443 3.388 -4.737 -0.695 -0.406 -4.085 -2.022 -3.095 ML 132 130 6 135 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 133 130 6 135 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 134 130 6 135 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 135 135 5 135 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 136 136 6 136 5 1 1 28 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 47 59 G C - - MP 137 136 6 141 6 2 2 26 45 -9.711 -9.651 -0.014 -8.427 -8.707 -9.102 -4.359 -2.997 -4.252 0.614 -5.407 -4.980 -0.537 -4.805 -4.478 3.449 -4.816 0.383 -0.790 -4.227 -2.536 -1.506 ML 138 136 6 141 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 139 136 6 141 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 140 136 6 141 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 141 141 5 141 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 142 142 6 142 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 48 58 C G - - MP 143 142 6 147 4 2 2 24 43 -8.188 -8.395 -0.022 -6.809 -4.952 -4.621 -4.753 -0.725 -3.589 -5.323 3.290 -4.292 -4.724 1.757 -5.091 -2.335 0.200 -5.069 -1.193 -3.523 ML 144 142 6 147 4 1 1 26 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 145 142 6 147 4 1 1 25 44 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 146 142 6 147 4 0 0 24 43 -4.568 -4.250 -2.265 -0.520 IL 147 147 5 147 4 1 1 27 46 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 148 148 6 148 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 49 - C - - - ML 149 148 6 151 3 1 1 21 40 -9.144 -0.009 -7.798 -4.230 1.930 -4.880 -3.302 D 150 148 6 151 3 0 0 21 40 -6.174 -1.687 -0.566 IL 151 151 3 151 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 50 - G - - - ML 152 151 3 154 3 1 1 20 39 -9.144 -0.009 -7.798 -2.794 -3.091 1.866 -3.424 D 153 151 3 154 3 0 0 20 39 -6.174 -1.687 -0.566 IL 154 154 3 154 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 51 - C - - - ML 155 154 3 157 3 1 1 19 38 -9.144 -0.009 -7.798 -4.230 1.930 -4.880 -3.302 D 156 154 3 157 3 0 0 19 38 -6.174 -1.687 -0.566 IL 157 157 3 157 3 1 1 23 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 52 - C - - - ML 158 157 3 160 3 1 1 18 36 -9.144 -0.009 -7.798 -2.826 1.693 -3.728 -0.862 D 159 157 3 160 3 0 0 18 36 -6.174 -1.687 -0.566 IL 160 160 3 160 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 53 - G - - - ML 161 160 3 163 3 1 1 17 35 -9.144 -0.009 -7.798 -0.616 -1.872 1.101 -0.105 D 162 160 3 163 3 0 0 17 35 -6.174 -1.687 -0.566 IL 163 163 3 163 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 54 - A - - - ML 164 163 3 166 3 1 1 15 34 -9.144 -0.009 -7.798 1.944 -4.582 -4.046 -4.301 D 165 163 3 166 3 0 0 16 34 -6.174 -1.687 -0.566 IL 166 166 3 166 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 55 - U - - - ML 167 166 3 169 3 1 1 14 32 -9.144 -0.009 -7.798 -2.569 -1.315 -3.317 1.735 D 168 166 3 169 3 0 0 15 33 -6.174 -1.687 -0.566 IL 169 169 3 169 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 56 - C - - - ML 170 169 3 172 3 1 1 12 31 -9.144 -0.009 -7.798 -4.230 1.930 -4.880 -3.302 D 171 169 3 172 3 0 0 13 32 -6.174 -1.687 -0.566 IL 172 172 3 172 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 57 - C - - - ML 173 172 3 175 2 1 1 1 1 * 0.000 -3.249 1.799 -4.067 -1.491 D 174 172 3 175 2 0 0 0 0 * 0.000 IL 175 175 3 175 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 48 ] - - - - - - E 176 175 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME sul1 ACC RF03058 DESC sul1 RNA LENG 56 MAXL 124 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 16 18:13:25 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03058/CM NSEQ 54 EFFN 11.631226 CKSUM 4144046634 STATS LOCAL MSV -7.9437 0.71923 STATS LOCAL VITERBI -8.2171 0.71923 STATS LOCAL FORWARD -3.8114 0.71923 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.83598 1.04679 1.16135 1.73490 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 0.00000 * 1 1.79390 0.56193 2.26336 1.83521 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 2 0.93012 1.51713 2.73909 1.13469 2 a - - : 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 3 1.50406 1.30757 2.21592 0.92069 3 u - - : 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 4 4.49918 5.58810 0.02178 5.00751 4 G - - : 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 5 2.71197 4.69770 0.09326 4.30319 5 G - - : 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 6 0.12881 4.90403 2.27751 4.51905 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 7 3.35764 0.32975 2.61288 1.75586 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.05133 3.15144 4.92761 0.30981 1.32271 1.09861 0.40547 8 4.36214 0.18657 4.24639 1.94400 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 9 3.73163 0.12032 4.31795 2.57593 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 10 3.78776 4.37780 0.04687 4.54762 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 11 2.11105 2.35790 0.35832 2.46012 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.71347 1.07043 1.78857 0.09387 2.41244 1.09861 0.40547 12 1.76744 1.66600 1.67172 0.79340 15 u - - < 1.38629 1.38629 1.38629 1.38629 0.14037 2.10095 4.75331 0.91950 0.50869 0.08310 2.52899 13 2.48709 1.84771 0.56862 1.64537 19 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 14 1.52936 1.01388 2.55500 1.07054 20 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 15 1.06766 2.02441 1.32559 1.35298 21 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 16 0.52179 3.01165 1.56345 1.91109 22 A - - _ 1.38629 1.38629 1.38629 1.38629 0.34393 1.90480 1.95074 0.85185 0.55621 1.09861 0.40547 17 1.65721 1.53904 1.30917 1.12486 28 u - - > 1.38629 1.38629 1.38629 1.38629 0.06280 4.78267 2.94710 1.46634 0.26236 2.03952 0.13937 18 3.07196 0.62913 3.75274 0.92341 29 C - - - 1.38629 1.38629 1.38629 1.38629 0.47074 1.00284 4.75331 0.04637 3.09424 0.08310 2.52899 19 2.37089 0.47818 2.24748 1.70912 31 C - - > 1.38629 1.38629 1.38629 1.38629 0.03403 4.92761 3.64148 1.46634 0.26236 1.09861 0.40547 20 4.99952 0.04332 4.86803 3.57664 32 C - - > 1.38629 1.38629 1.38629 1.38629 0.01488 4.90845 4.90845 1.46634 0.26236 0.43998 1.03296 21 2.89101 4.46315 0.08517 4.22670 33 G - - > 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 22 2.58633 4.38355 0.10978 4.12335 34 G - - > 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 23 1.85855 2.71540 0.31040 3.10618 35 G - - > 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 24 4.62562 3.44071 4.61769 0.05310 36 U - - > 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 25 4.49918 5.58810 0.02178 5.00751 37 G - - - 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 26 4.49918 5.58810 0.02178 5.00751 38 G - - - 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 27 4.90509 0.02684 5.26350 4.27586 39 C - - - 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 28 3.40386 3.35876 2.48989 0.16363 40 U - - - 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 29 1.10683 0.73504 2.83260 2.03221 41 c - - - 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 30 2.74325 1.92963 2.00710 0.42150 42 U - - - 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 31 2.44800 1.37884 1.64865 0.75640 43 u - - < 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 32 5.40581 0.02538 5.37857 4.13775 44 C - - < 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 33 4.37065 0.22233 4.24000 1.75852 45 C - - < 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 34 2.69338 2.13447 0.26497 3.06166 46 G - - < 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 35 2.63970 3.54917 0.16831 2.90446 47 G - - < 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 36 3.82415 0.37181 1.46599 2.85026 48 C - - < 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 37 4.90509 0.02684 5.26350 4.27586 49 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 38 3.89686 3.65662 0.06113 4.32959 50 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 39 4.90509 0.02684 5.26350 4.27586 51 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 40 3.93433 0.16727 4.53441 2.08963 52 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 41 1.98977 3.10008 0.53082 1.46922 53 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 42 0.01995 5.24403 4.84651 5.01861 54 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 43 3.68580 2.38477 4.19858 0.14180 55 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 44 4.90509 0.02684 5.26350 4.27586 56 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 45 4.23671 0.10300 4.73536 2.59506 57 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 46 3.12700 1.48765 0.35395 3.56349 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 47 3.61623 0.26290 3.35250 1.77607 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 48 3.33254 0.29071 2.32880 2.12734 60 C - - > 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 49 1.83995 4.38372 0.20760 4.12487 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 50 4.37935 5.50921 0.02205 5.25369 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 51 0.73966 1.98760 1.27287 2.24743 63 a - - > 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 52 1.77123 0.68505 1.92267 1.71703 64 C - - : 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 53 0.47389 1.50603 3.18492 2.16932 65 A - - : 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 54 0.19373 2.36745 3.07072 3.32391 66 A - - : 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 55 1.65606 0.55359 3.36452 1.61120 67 C - - : 1.38629 1.38629 1.38629 1.38629 0.01459 4.92761 4.92761 1.46634 0.26236 1.09861 0.40547 56 1.96381 1.00327 1.21144 1.63359 68 c - - : 1.38629 1.38629 1.38629 1.38629 0.00732 4.92034 * 1.46634 0.26236 0.00000 * //