INFERNAL1/a [1.1.5 | Sep 2023] NAME narK ACC RF03032 DESC narK RNA STATES 220 NODES 67 CLEN 72 W 108 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 16 19:08:13 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03032/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 308 EFFN 6.010925 CKSUM 694892403 NULL 0.000 0.000 0.000 0.000 GA 43.20 TC 43.50 NC 43.10 EFP7GF -12.2646 0.71878 ECMLC 0.71789 -8.96999 0.13969 1600000 830499 0.001445 ECMGC 0.38630 -21.34493 -7.78432 1600000 75350 0.005309 ECMLI 0.53778 -9.91394 1.66096 1600000 606144 0.001980 ECMGI 0.42351 -15.21998 -3.32094 1600000 61749 0.006478 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 108 155 -8.058 -8.265 -0.024 -6.680 IL 1 1 2 1 4 4 30 111 157 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 3 30 110 157 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 5 30 108 155 -9.018 -0.010 -7.672 -3.502 -4.940 1.936 -4.243 D 4 2 3 5 3 0 24 106 153 -6.174 -1.687 -0.566 IL 5 5 3 5 3 3 29 109 156 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 4 29 107 154 -9.018 -0.010 -7.672 -3.502 -4.940 1.936 -4.243 D 7 5 3 8 3 0 24 105 152 -6.174 -1.687 -0.566 IL 8 8 3 8 3 3 28 108 155 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - C - - - ML 9 8 3 11 3 4 28 106 153 -9.018 -0.010 -7.672 -4.032 1.920 -4.714 -3.109 D 10 8 3 11 3 0 23 104 151 -6.174 -1.687 -0.566 IL 11 11 3 11 3 2 27 107 154 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - a - - - ML 12 11 3 14 3 4 28 105 152 -9.018 -0.010 -7.672 0.655 0.054 -0.714 -0.363 D 13 11 3 14 3 0 22 103 150 -6.174 -1.687 -0.566 IL 14 14 3 14 3 2 27 106 153 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 3 27 104 151 -9.018 -0.010 -7.672 -1.466 1.563 -2.938 -0.854 D 16 14 3 17 3 0 22 102 149 -6.174 -1.687 -0.566 IL 17 17 3 17 3 2 26 105 152 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 3 26 103 150 -9.018 -0.010 -7.672 1.080 -1.861 0.369 -1.650 D 19 17 3 20 3 0 21 101 148 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 25 104 151 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - g - - - ML 21 20 3 23 3 3 25 102 149 -9.018 -0.010 -7.672 -0.433 -0.338 0.395 0.205 D 22 20 3 23 3 0 20 100 147 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 24 103 150 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - c - - - ML 24 23 3 26 3 2 24 101 148 -9.018 -0.010 -7.672 0.045 0.380 -0.631 0.031 D 25 23 3 26 3 0 20 99 146 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 23 102 149 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - u - - - ML 27 26 3 29 3 2 23 100 147 -9.018 -0.016 -6.794 0.089 -0.647 -0.687 0.745 D 28 26 3 29 3 0 19 98 145 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 23 101 148 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - c - - - ML 30 29 3 32 3 2 22 99 146 -9.012 -0.010 -7.666 -0.415 0.990 -1.045 -0.360 D 31 29 3 32 3 0 18 97 144 -6.284 -1.470 -0.675 IL 32 32 3 32 3 1 22 100 147 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - U - - - ML 33 32 3 35 3 2 21 98 145 -9.018 -0.010 -7.672 -1.151 -1.270 -2.265 1.550 D 34 32 3 35 3 0 18 96 143 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 21 99 146 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - U - - - ML 36 35 3 38 3 1 20 97 144 -9.018 -0.010 -7.672 -1.921 -1.185 -2.234 1.625 D 37 35 3 38 3 0 17 95 142 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 20 98 145 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - G - - - ML 39 38 3 41 3 1 19 96 143 -9.018 -0.010 -7.672 -3.502 -4.940 1.936 -4.243 D 40 38 3 41 3 0 16 94 141 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 19 97 144 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - C - - - ML 42 41 3 44 3 1 18 95 142 -9.018 -0.010 -7.672 -4.032 1.920 -4.714 -3.109 D 43 41 3 44 3 0 16 94 140 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 18 96 143 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 45 44 3 47 3 1 17 94 141 -9.018 -0.346 -2.242 -1.304 -1.788 -2.412 1.640 D 46 44 3 47 3 0 16 93 140 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 18 95 142 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - a - - - ML 48 47 3 50 3 1 17 94 140 -8.685 -0.021 -6.344 0.376 -0.604 -0.254 0.269 D 49 47 3 50 3 0 15 92 139 -8.486 -0.216 -2.877 IL 50 50 3 50 3 1 17 94 141 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - a - - - ML 51 50 3 53 3 1 16 93 139 -9.011 -0.010 -7.665 0.808 -0.633 -0.777 0.030 D 52 50 3 53 3 0 13 91 137 -6.303 -1.436 -0.695 IL 53 53 3 53 3 1 16 93 140 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - a - - - ML 54 53 3 56 3 1 15 92 138 -9.018 -0.191 -3.036 0.825 -1.245 -0.033 -0.270 D 55 53 3 56 3 0 13 90 137 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 15 93 139 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - g - - - ML 57 56 3 59 3 1 14 91 137 -8.839 -0.026 -6.011 -0.270 -0.618 0.545 0.084 D 58 56 3 59 3 0 12 90 136 -7.873 -0.344 -2.265 IL 59 59 3 59 3 1 14 92 138 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - c - - - ML 60 59 3 62 3 1 13 90 136 -9.006 -0.010 -7.660 -0.089 0.568 -1.301 0.228 D 61 59 3 62 3 0 10 88 134 -6.399 -1.286 -0.791 IL 62 62 3 62 3 1 13 91 137 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - a - - - ML 63 62 3 65 3 1 13 89 135 -6.955 -0.022 -7.115 0.696 0.156 -1.237 -0.250 D 64 62 3 65 3 0 9 87 133 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 12 90 136 -1.413 -0.808 -4.225 0.000 0.000 0.000 0.000 [ MATL 22 ] 24 - a - - - ML 66 65 3 68 3 1 12 88 134 -9.015 -0.010 -7.669 0.500 0.009 -0.928 0.077 D 67 65 3 68 3 0 8 86 132 -6.237 -1.750 -0.537 IL 68 68 3 68 3 1 12 89 135 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 25 - u - - - ML 69 68 3 71 3 1 11 87 133 -9.015 -0.010 -7.669 -0.132 -0.148 -0.753 0.671 D 70 68 3 71 3 0 8 85 131 -6.237 -1.557 -0.628 IL 71 71 3 71 3 1 11 88 134 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 26 - c - - - ML 72 71 3 74 3 1 10 86 132 -9.018 -0.078 -4.299 -0.412 0.963 -1.024 -0.310 D 73 71 3 74 3 0 7 84 131 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 10 87 133 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 27 - c - - - ML 75 74 3 77 3 1 9 85 132 -8.951 -0.416 -2.009 0.064 0.092 -0.220 0.044 D 76 74 3 77 3 0 7 83 130 -7.086 -1.595 -0.596 IL 77 77 3 77 3 1 9 86 132 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 28 - u - - - ML 78 77 3 80 3 1 8 84 131 -8.581 -0.041 -5.317 -0.269 0.164 -0.632 0.490 D 79 77 3 80 3 0 7 83 130 -8.765 -0.206 -2.932 IL 80 80 3 80 3 1 8 85 131 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 29 - c - - - ML 81 80 3 83 3 1 7 83 130 -8.990 -0.010 -7.644 -0.357 0.824 -0.993 -0.079 D 82 80 3 83 3 0 4 81 128 -6.634 -1.004 -1.026 IL 83 83 3 83 3 1 7 84 130 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 30 - A - - - ML 84 83 3 86 3 1 7 82 129 -9.018 -0.039 -5.324 1.352 -1.295 -0.824 -1.073 D 85 83 3 86 3 0 3 80 127 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 7 83 130 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 31 - C - - - ML 87 86 3 89 3 1 6 81 128 -8.989 -0.307 -2.399 -0.459 1.046 -0.943 -0.541 D 88 86 3 89 3 0 3 79 126 -6.644 -2.157 -0.385 IL 89 89 3 89 3 1 7 82 129 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 32 - a - - - ML 90 89 3 92 3 1 6 80 127 -2.616 -0.267 -7.365 0.658 0.139 -0.799 -0.423 D 91 89 3 92 3 0 2 79 126 -7.363 -0.183 -3.146 IL 92 92 3 92 3 1 5 80 127 -2.130 -0.426 -5.205 0.000 0.000 0.000 0.000 [ MATR 31 ] - 91 - C - - MR 93 92 3 95 3 1 6 79 126 -9.359 -0.009 -7.677 -1.389 1.245 -2.142 0.032 D 94 92 3 95 3 0 0 77 124 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 4 79 126 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 90 - G - - MR 96 95 3 98 3 1 5 78 125 -9.359 -0.009 -7.677 -1.388 -2.178 1.630 -1.729 D 97 95 3 98 3 0 0 76 123 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 3 78 125 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 89 - C - - MR 99 98 3 101 3 1 5 77 124 -9.359 -0.009 -7.677 -4.032 1.920 -4.714 -3.109 D 100 98 3 101 3 0 0 75 122 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 2 77 124 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 34 ] - 88 - U - - MR 102 101 3 104 3 1 4 76 123 -9.359 -0.009 -7.677 -2.123 -0.513 -2.897 1.554 D 103 101 3 104 3 0 0 74 121 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 2 76 123 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 35 ] - 87 - G - - MR 105 104 3 107 3 1 4 75 122 -9.359 -0.009 -7.677 -3.502 -4.940 1.936 -4.243 D 106 104 3 107 3 0 0 73 120 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 1 75 122 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 86 - C - - MR 108 107 3 110 3 1 3 74 121 -9.359 -0.009 -7.677 -3.750 1.893 -4.454 -2.582 D 109 107 3 110 3 0 0 72 119 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 1 74 121 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 85 - A - - MR 111 110 3 113 3 1 3 73 120 -9.359 -0.009 -7.677 1.082 -2.642 0.583 -2.157 D 112 110 3 113 3 0 0 71 118 -6.390 -1.568 -0.620 IR 113 113 3 113 3 1 1 73 120 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 84 - G - - MR 114 113 3 116 3 1 2 72 119 -9.359 -0.009 -7.677 -2.977 -3.737 1.895 -3.657 D 115 113 3 116 3 0 0 70 117 -6.390 -1.568 -0.620 IR 116 116 3 116 3 1 1 72 119 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 83 - A - - MR 117 116 3 119 3 1 2 71 118 -9.359 -0.009 -7.677 1.676 -1.751 -2.233 -1.757 D 118 116 3 119 3 0 0 69 116 -6.390 -1.568 -0.620 IR 119 119 3 119 3 1 1 71 118 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 82 - A - - MR 120 119 3 122 3 1 2 70 117 -5.657 -0.036 -7.677 1.907 -4.000 -3.159 -3.756 D 121 119 3 122 3 0 0 68 115 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 1 70 117 -2.089 -0.484 -4.327 0.000 0.000 0.000 0.000 [ MATR 41 ] - 80 - A - - MR 123 122 3 125 3 1 1 69 116 -9.359 -0.009 -7.677 1.852 -3.539 -2.315 -3.291 D 124 122 3 125 3 0 0 67 114 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 1 69 116 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 79 - C - - MR 126 125 3 128 3 1 1 68 115 -9.359 -0.009 -7.677 -4.032 1.920 -4.714 -3.109 D 127 125 3 128 3 0 0 66 112 -6.390 -1.568 -0.620 IR 128 128 3 128 3 1 1 68 115 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 43 ] - 78 - A - - MR 129 128 3 131 3 1 1 67 114 -9.359 -0.009 -7.677 1.905 -3.971 -3.108 -3.727 D 130 128 3 131 3 0 0 64 111 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 1 67 114 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 44 ] - 77 - G - - MR 132 131 3 134 3 1 1 66 113 -9.359 -0.009 -7.677 -3.502 -4.940 1.936 -4.243 D 133 131 3 134 3 0 0 63 109 -6.390 -1.568 -0.620 IR 134 134 3 134 3 1 1 66 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 45 ] - 76 - C - - MR 135 134 3 137 3 1 1 65 112 -2.541 -1.056 -1.527 -1.747 1.630 -2.059 -1.446 D 136 134 3 137 3 0 0 57 104 -6.390 -1.568 -0.620 IR 137 137 3 137 3 1 1 69 115 -0.570 -1.660 -6.669 0.000 0.000 0.000 0.000 [ MATR 46 ] - 67 - A - - MR 138 137 3 140 3 1 1 41 59 -8.755 -0.014 -7.072 1.439 -1.382 -1.275 -1.022 D 139 137 3 140 3 0 0 40 58 -9.138 -0.853 -1.170 IR 140 140 3 140 3 1 1 42 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 47 ] - 66 - a - - MR 141 140 3 143 3 1 1 40 58 -9.142 -0.011 -7.460 0.376 -0.073 -0.979 0.316 D 142 140 3 143 3 0 0 39 57 -8.128 -0.725 -1.354 IR 143 143 3 143 3 1 1 41 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 48 ] - 65 - c - - MR 144 143 3 146 3 1 1 39 57 -9.301 -0.010 -7.619 0.112 0.460 -1.278 0.178 D 145 143 3 146 3 0 0 38 56 -7.116 -1.255 -0.801 IR 146 146 3 146 3 1 1 40 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 49 ] - 64 - c - - MR 147 146 3 149 3 1 1 38 56 -9.333 -0.009 -7.651 -0.479 0.676 -1.558 0.428 D 148 146 3 149 3 0 0 36 55 -6.767 -1.685 -0.557 IR 149 149 3 149 3 1 1 39 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 50 ] - 63 - a - - MR 150 149 3 152 3 1 1 37 55 -9.339 -0.009 -7.656 0.492 -0.107 -1.005 0.223 D 151 149 3 152 3 0 0 35 54 -6.691 -1.869 -0.481 IR 152 152 3 152 3 1 1 38 56 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 51 ] - 62 - c - - MR 153 152 3 155 3 1 1 36 54 -9.339 -0.017 -6.591 0.171 0.668 -1.311 -0.180 D 154 152 3 155 3 0 0 34 53 -6.691 -1.567 -0.615 IR 155 155 3 155 3 1 1 37 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 52 ] - 61 - C - - MR 156 155 3 158 5 1 1 35 53 -2.067 -0.428 -6.324 -8.056 -8.948 -1.426 1.542 -2.095 -1.054 D 157 155 3 158 5 0 0 33 52 -5.536 -0.602 -3.163 -4.593 -2.588 IR 158 158 3 158 5 1 1 35 53 -3.584 -0.199 -7.096 -5.263 -6.369 0.000 0.000 0.000 0.000 [ MATP 53 ] 36 59 G C - - MP 159 158 3 163 6 2 2 34 52 -9.629 -9.568 -0.015 -8.344 -8.624 -9.019 -4.091 -1.677 -3.944 0.973 -4.925 -3.630 0.178 -4.590 -4.291 3.333 -4.557 -0.291 -0.170 -3.781 -2.097 -2.917 ML 160 158 3 163 6 1 1 32 50 -6.384 -6.730 -1.133 -1.139 -6.580 -4.109 0.642 -0.572 -0.275 -0.088 MR 161 158 3 163 6 1 1 32 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 3 163 6 0 0 30 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 33 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 54 ] 37 58 G C - - MP 165 164 6 169 6 2 2 32 50 -4.722 -9.575 -0.069 -8.352 -8.631 -9.026 -4.006 -2.767 -3.866 0.880 -4.578 -4.476 0.978 -4.408 -4.209 3.168 -4.503 0.172 0.022 -3.756 -1.591 -2.816 ML 166 164 6 169 6 1 1 30 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 30 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 28 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 31 49 -3.182 -3.445 -0.453 -5.100 -5.876 -5.537 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 31 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 55 ] 39 57 c g - - MP 171 170 6 175 6 2 2 30 48 -9.636 -9.575 -0.015 -8.352 -8.631 -9.026 -2.050 -2.443 -2.479 1.005 -2.281 -2.772 1.899 -2.701 -2.521 1.027 -3.084 -0.893 1.777 -2.366 1.228 -1.626 ML 172 170 6 175 6 1 1 28 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 6 1 1 28 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 174 170 6 175 6 0 0 26 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 175 175 5 175 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 176 176 6 176 5 1 1 29 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 40 56 a u - - MP 177 176 6 181 6 2 2 28 46 -9.636 -9.575 -0.015 -8.352 -8.631 -9.026 -3.064 -1.665 -3.120 2.471 -3.354 -3.879 0.781 -3.528 -3.003 2.215 -3.235 -0.392 0.617 -3.154 -1.181 -2.222 ML 178 176 6 181 6 1 1 26 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 179 176 6 181 6 1 1 26 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 180 176 6 181 6 0 0 24 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 181 181 5 181 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 182 182 6 182 5 1 1 27 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 57 ] 41 55 g c - - MP 183 182 6 187 6 2 2 26 44 -9.636 -6.738 -0.026 -8.352 -8.631 -9.026 -3.653 -0.942 -3.703 1.902 -4.371 -4.299 -0.007 -4.135 -3.797 2.328 -4.114 1.899 -0.023 -3.664 -1.892 -2.173 ML 184 182 6 187 6 1 1 24 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 185 182 6 187 6 1 1 24 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 186 182 6 187 6 0 0 22 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 187 187 5 187 6 1 1 25 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 188 188 6 188 5 1 1 25 43 -2.505 -0.458 -6.016 -4.184 -5.290 0.000 0.000 0.000 0.000 [ MATP 58 ] 42 53 C G - - MP 189 188 6 193 6 2 2 24 42 -9.636 -9.575 -0.015 -8.352 -8.631 -9.026 -5.320 -5.337 -4.921 -1.407 -3.462 -5.269 3.467 -4.299 -4.948 -1.257 -5.206 -3.287 1.647 -5.314 -0.984 -3.740 ML 190 188 6 193 6 1 1 23 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 191 188 6 193 6 1 1 23 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 192 188 6 193 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 193 193 5 193 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 194 194 6 194 5 1 1 23 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 59 ] 43 52 C G - - MP 195 194 6 199 4 2 2 22 40 -5.807 -8.265 -0.045 -6.680 -6.151 -6.133 -5.586 -1.529 -4.065 -5.824 3.832 -5.003 -5.702 -2.212 -5.791 -4.086 -0.722 -6.130 -1.829 -4.507 ML 196 194 6 199 4 1 1 22 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 197 194 6 199 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 198 194 6 199 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 199 199 5 199 4 1 1 23 41 -1.866 -1.794 -1.298 -5.035 0.000 0.000 0.000 0.000 IR 200 200 6 200 3 1 1 22 40 -1.534 -0.734 -4.234 0.000 0.000 0.000 0.000 [ MATL 60 ] 45 - A - - - ML 201 200 6 203 3 1 1 18 37 -9.018 -0.010 -7.672 1.935 -4.376 -3.849 -4.091 D 202 200 6 203 3 0 0 18 36 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 46 - A - - - ML 204 203 3 206 3 1 1 17 35 -9.018 -0.010 -7.672 1.935 -4.376 -3.849 -4.091 D 205 203 3 206 3 0 0 17 35 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 47 - C - - - ML 207 206 3 209 3 1 1 15 34 -9.018 -0.010 -7.672 -2.264 1.757 -3.520 -1.619 D 208 206 3 209 3 0 0 16 34 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 48 - G - - - ML 210 209 3 212 3 1 1 14 32 -9.018 -0.010 -7.672 -3.089 -4.731 1.920 -4.075 D 211 209 3 212 3 0 0 15 33 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 49 - G - - - ML 213 212 3 215 3 1 1 12 31 -9.018 -0.010 -7.672 -1.014 -1.313 1.386 -1.032 D 214 212 3 215 3 0 0 13 32 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 50 - C - - - ML 216 215 3 218 2 1 1 1 1 * 0.000 -2.539 1.736 -3.531 -1.283 D 217 215 3 218 2 0 0 0 0 * 0.000 IL 218 218 3 218 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 66 ] - - - - - - E 219 218 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME narK ACC RF03032 DESC narK RNA LENG 72 MAXL 145 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 16 19:08:13 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03032/CM NSEQ 308 EFFN 8.464172 CKSUM 694892403 STATS LOCAL MSV -8.3410 0.71878 STATS LOCAL VITERBI -9.1303 0.71878 STATS LOCAL FORWARD -3.5986 0.71878 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.41018 1.17792 1.35115 1.66580 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 0.00000 * 1 4.18095 5.22213 0.03032 4.68979 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 2 4.18095 5.22213 0.03032 4.68979 2 G - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 3 4.57891 0.03728 4.98486 3.93777 3 C - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 4 0.90592 1.30797 1.91301 1.72695 4 a - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 5 2.53048 0.25659 3.72115 2.09975 5 C - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 6 0.59338 2.88315 1.08981 2.89487 6 A - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 7 1.78411 1.61539 1.05699 1.25267 7 g - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 8 1.37503 1.07216 1.83815 1.40328 8 c - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 9 1.33263 1.88090 1.88079 0.84096 9 u - - : 1.38629 1.38629 1.38629 1.38629 0.02056 4.83408 4.39032 1.46634 0.26236 1.09861 0.40547 10 1.74189 0.63045 2.15686 1.73290 10 C - - : 1.38629 1.38629 1.38629 1.38629 0.01611 4.82962 4.82962 1.46634 0.26236 0.82560 0.57621 11 2.31411 2.39343 3.19471 0.26286 11 U - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 12 3.02784 2.29780 3.10035 0.21559 12 U - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 13 4.18095 5.22213 0.03032 4.68979 13 G - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 14 4.57891 0.03728 4.98486 3.93777 14 C - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 15 2.41773 2.84793 3.29158 0.20369 15 U - - : 1.38629 1.38629 1.38629 1.38629 0.27318 4.83408 1.46496 1.46634 0.26236 1.09861 0.40547 16 1.11489 1.83894 1.55322 1.19899 16 a - - : 1.38629 1.38629 1.38629 1.38629 0.02763 4.58159 4.07398 1.46634 0.26236 0.06657 2.74254 17 0.79141 1.85549 1.96399 1.38580 17 a - - : 1.38629 1.38629 1.38629 1.38629 0.01612 4.82880 4.82880 1.46634 0.26236 0.79021 0.60468 18 0.77870 2.36416 1.38916 1.62109 18 a - - : 1.38629 1.38629 1.38629 1.38629 0.15361 4.83408 2.00666 1.46634 0.26236 1.09861 0.40547 19 1.64433 1.83955 0.94758 1.34596 19 g - - : 1.38629 1.38629 1.38629 1.38629 0.02952 4.69885 3.91273 1.46634 0.26236 0.11184 2.24610 20 1.47493 0.93694 2.38937 1.24587 20 c - - : 1.38629 1.38629 1.38629 1.38629 0.01619 4.82453 4.82453 1.46634 0.26236 0.64774 0.74071 21 0.87281 1.23539 2.34908 1.62940 21 a - - : 1.38629 1.38629 1.38629 1.38629 0.02535 4.22813 4.56084 1.09091 0.40934 1.09861 0.40547 22 1.02021 1.35302 2.08543 1.35959 24 a - - : 1.38629 1.38629 1.38629 1.38629 0.01608 4.83157 4.83157 1.46634 0.26236 1.19822 0.35915 23 1.51146 1.48216 1.92893 0.89903 25 u - - : 1.38629 1.38629 1.38629 1.38629 0.01608 4.83157 4.83157 1.46634 0.26236 0.92498 0.50507 24 1.74070 0.64915 2.14039 1.69009 26 C - - : 1.38629 1.38629 1.38629 1.38629 0.06774 4.83408 2.85524 1.46634 0.26236 1.09861 0.40547 25 1.36392 1.28406 1.52195 1.38973 27 c - - : 1.38629 1.38629 1.38629 1.38629 0.32942 4.78322 1.30089 1.46634 0.26236 1.05663 0.42714 26 1.63299 1.23212 1.83353 1.04091 28 u - - : 1.38629 1.38629 1.38629 1.38629 0.04364 4.50162 3.45412 1.46634 0.26236 0.07555 2.62051 27 1.69815 0.74829 2.11999 1.49714 29 c - - : 1.38629 1.38629 1.38629 1.38629 0.01638 4.81272 4.81272 1.46634 0.26236 0.43632 1.03963 28 0.39626 2.37589 2.00446 2.30755 30 A - - : 1.38629 1.38629 1.38629 1.38629 0.03832 4.83408 3.51874 1.46634 0.26236 1.09861 0.40547 29 1.78221 0.58813 2.07432 1.89230 31 C - - : 1.38629 1.38629 1.38629 1.38629 0.24347 4.81216 1.57037 1.46634 0.26236 1.74502 0.19194 30 0.89843 1.24079 1.99020 1.78996 32 a - - : 1.38629 1.38629 1.38629 1.38629 0.23024 1.63221 4.58921 0.29389 1.36790 0.06827 2.71818 31 1.92630 2.57357 0.35532 2.56262 36 G - - < 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 32 2.11571 2.04288 0.41154 2.43990 37 G - - < 1.38629 1.38629 1.38629 1.38629 0.08645 2.59202 4.83408 0.20041 1.70590 1.09861 0.40547 33 1.84205 1.34631 1.77547 0.88696 39 u - - < 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 34 0.86436 2.22901 1.06655 2.06473 40 a - - < 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 35 1.24076 2.87814 0.55842 2.49515 41 G - - < 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 36 3.86246 0.31085 3.69991 1.50764 42 C - - < 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 37 3.80960 0.08315 4.26847 3.13214 43 C - - < 1.38629 1.38629 1.38629 1.38629 0.03111 3.78658 4.83408 0.59672 0.79987 1.09861 0.40547 38 0.02926 4.85099 4.46872 4.65100 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 39 0.02926 4.85099 4.46872 4.65100 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 40 3.15006 0.13327 4.13263 2.71994 47 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 41 3.80042 5.06267 0.03985 4.56843 48 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 42 2.25482 2.35026 0.36966 2.21830 49 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 43 3.41942 0.14849 4.13336 2.41656 50 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03111 3.78658 4.83408 0.59672 0.79987 1.09861 0.40547 44 3.41017 4.43280 0.07283 3.67592 52 G - - > 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 45 1.61021 3.85020 0.28482 3.62204 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.03111 3.78658 4.83408 0.59672 0.79987 1.09861 0.40547 46 2.76379 1.07398 2.68470 0.64044 55 U - - > 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 47 2.24753 1.14859 2.04293 0.80384 56 u - - > 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 48 1.36435 1.87248 0.88941 1.71584 57 g - - > 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 49 2.72454 0.50648 1.91678 1.68885 58 C - - > 1.38629 1.38629 1.38629 1.38629 0.02550 4.83408 4.06158 1.46634 0.26236 1.09861 0.40547 50 2.79797 0.38209 2.46045 1.76473 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.36059 1.27896 3.71264 0.05672 2.89777 0.65426 0.73361 51 2.53600 0.26265 2.95579 2.30487 61 C - - : 1.38629 1.38629 1.38629 1.38629 0.02174 4.81771 4.31080 1.46634 0.26236 1.05765 0.42660 52 1.27211 0.85982 2.40279 1.57960 62 c - - : 1.38629 1.38629 1.38629 1.38629 0.01629 4.81844 4.81844 1.46634 0.26236 1.59948 0.22565 53 1.02450 1.44551 2.14965 1.24177 63 a - - : 1.38629 1.38629 1.38629 1.38629 0.02089 4.81844 4.37456 1.46634 0.26236 1.59948 0.22565 54 1.79500 0.85782 2.60927 1.09005 64 c - - : 1.38629 1.38629 1.38629 1.38629 0.04133 4.81392 3.43054 1.46634 0.26236 1.70642 0.20030 55 1.31676 1.01503 2.37682 1.28460 65 c - - : 1.38629 1.38629 1.38629 1.38629 0.14405 4.78936 2.07279 1.46634 0.26236 2.13978 0.12520 56 1.11159 1.42065 2.12813 1.17006 66 a - - : 1.38629 1.38629 1.38629 1.38629 0.33802 4.66435 1.28232 1.46634 0.26236 3.11910 0.04520 57 0.32712 2.45744 2.41315 2.26514 67 A - - : 1.38629 1.38629 1.38629 1.38629 0.40619 1.13649 4.35242 1.43425 0.27220 0.03996 3.23978 58 2.81526 0.20310 2.89919 2.67583 76 C - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 59 4.18095 5.22213 0.03032 4.68979 77 G - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 60 0.04731 4.51122 3.79509 4.36253 78 A - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 61 4.57891 0.03728 4.98486 3.93777 79 C - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 62 0.07977 4.17996 3.12743 4.04332 80 A - - : 1.38629 1.38629 1.38629 1.38629 0.03702 3.56165 4.83408 0.48920 0.94963 1.09861 0.40547 63 0.04573 4.53488 3.83964 4.38458 82 A - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 64 0.18855 2.68055 3.16677 2.79395 83 A - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 65 3.80199 4.15338 0.05346 4.26743 84 G - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 66 0.59747 3.64949 0.94369 3.36374 85 A - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 67 4.36295 0.05418 4.78175 3.45412 86 C - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 68 4.18095 5.22213 0.03032 4.68979 87 G - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 69 3.21800 1.75785 3.75628 0.26895 88 U - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 70 4.57891 0.03728 4.98486 3.93777 89 C - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 71 2.48945 2.98682 0.22415 2.69704 90 G - - : 1.38629 1.38629 1.38629 1.38629 0.01604 4.83408 4.83408 1.46634 0.26236 1.09861 0.40547 72 2.55511 0.46824 3.05081 1.39073 91 C - - : 1.38629 1.38629 1.38629 1.38629 0.00805 4.82609 * 1.46634 0.26236 0.00000 * //