INFERNAL1/a [1.1.5 | Sep 2023] NAME Transposase-1 ACC RF03014 DESC Transposase-1 RNA STATES 181 NODES 48 CLEN 59 W 74 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 07:12:39 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03014/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 176 EFFN 9.794189 CKSUM 2749167138 NULL 0.000 0.000 0.000 0.000 GA 42.80 TC 43.40 NC 40.20 EFP7GF -16.1828 0.71903 ECMLC 0.64888 -5.57586 3.22855 1600000 363342 0.003303 ECMGC 0.43269 -17.39684 -3.61743 1600000 155387 0.002574 ECMLI 0.65349 -3.97277 4.14989 1600000 242347 0.004952 ECMGI 0.45032 -13.44068 -0.99822 1600000 108505 0.003686 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 74 93 -8.641 -8.848 -0.022 -6.605 IL 1 1 2 1 4 1 18 78 98 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 18 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 17 74 93 -9.579 -0.629 -1.506 -2.065 1.337 -3.227 0.175 D 4 2 3 5 3 0 15 73 92 -6.317 -1.830 -0.502 IL 5 5 3 5 3 1 20 77 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 20 73 92 -8.960 -0.010 -7.614 -0.976 -1.077 1.361 -1.156 D 7 5 3 8 3 0 14 71 90 -9.631 -5.144 -0.043 IL 8 8 3 8 3 1 19 76 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 3 1 19 72 91 -8.960 -0.022 -6.280 -0.455 -1.482 -2.152 1.426 D 10 8 3 11 3 0 14 70 89 -9.631 -1.828 -0.480 IL 11 11 3 11 3 1 18 75 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 1 18 71 90 -9.153 -0.009 -7.807 -1.439 -2.019 -2.929 1.702 D 13 11 3 14 3 0 14 70 89 -9.234 -0.287 -2.485 IL 14 14 3 14 3 1 16 74 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 18 70 89 -9.542 -0.007 -8.196 1.353 -0.189 -2.177 -1.523 D 16 14 3 17 3 0 11 68 87 -7.034 -2.547 -0.284 IL 17 17 3 17 3 1 16 73 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 1 17 69 88 -9.542 -0.007 -8.196 1.363 -1.882 -0.083 -2.240 D 19 17 3 20 3 0 10 67 86 -7.034 -2.547 -0.284 IL 20 20 3 20 3 1 15 72 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - G - - - ML 21 20 3 23 3 1 16 68 87 -9.542 -0.007 -8.196 -1.894 -2.371 1.685 -1.634 D 22 20 3 23 3 0 10 67 85 -7.034 -2.547 -0.284 IL 23 23 3 23 3 1 15 71 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 15 67 86 -9.869 -0.007 -8.186 1.963 -5.198 -4.639 -4.900 D 25 23 3 26 3 0 10 66 84 -6.201 -0.447 -1.984 IL 26 26 3 26 3 1 13 68 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 69 - A - - MR 27 26 3 29 3 1 15 66 85 -9.910 -0.006 -8.227 1.884 -3.763 -3.222 -2.963 D 28 26 3 29 3 0 6 64 83 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 12 67 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 68 - G - - MR 30 29 3 32 3 1 14 65 84 -9.910 -0.006 -8.227 -0.710 -3.170 1.617 -2.257 D 31 29 3 32 3 0 5 63 82 -6.390 -1.568 -0.620 IR 32 32 3 32 3 1 11 66 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 67 - U - - MR 33 32 3 35 3 1 14 64 83 -9.910 -0.006 -8.227 -0.051 -1.110 -1.704 1.179 D 34 32 3 35 3 0 5 62 81 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 10 65 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 66 - U - - MR 36 35 3 38 3 1 13 63 82 -9.910 -0.006 -8.227 0.270 -1.236 -1.517 1.015 D 37 35 3 38 3 0 4 61 80 -6.390 -1.568 -0.620 IR 38 38 3 38 3 1 9 64 82 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 65 - G - - MR 39 38 3 41 5 1 13 62 81 -8.584 -0.014 -8.399 -8.612 -9.503 -2.492 -3.160 1.857 -3.529 D 40 38 3 41 5 0 3 61 79 -5.352 -0.707 -2.978 -4.409 -2.404 IR 41 41 3 41 5 1 7 62 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 9 64 G U - - MP 42 41 3 46 6 2 13 61 80 -9.997 -9.936 -0.011 -8.713 -8.992 -9.387 -5.441 -4.092 -5.637 0.165 -7.684 -8.637 -3.127 -5.679 -5.198 1.148 -5.851 3.605 -3.102 -6.877 -4.977 -4.238 ML 43 41 3 46 6 1 5 59 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 3 46 6 1 5 59 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 3 46 6 0 1 57 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 6 61 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 7 60 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 10 63 a u - - MP 48 47 6 52 6 2 12 59 78 -9.997 -9.936 -0.011 -8.713 -8.992 -9.387 -2.889 -2.866 -2.611 2.057 -2.424 -3.862 1.622 -3.235 -3.088 1.679 -3.630 -0.708 1.482 -3.156 -0.284 -2.146 ML 49 47 6 52 6 1 5 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 5 57 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 1 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 6 59 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 6 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 11 62 u a - - MP 54 53 6 58 6 2 11 57 76 -9.997 -9.936 -0.011 -8.713 -8.992 -9.387 -2.223 -2.187 -2.917 0.953 -1.764 -3.767 1.612 -3.084 -2.946 0.377 -3.507 -1.251 2.356 -3.066 1.343 -2.041 ML 55 53 6 58 6 1 4 56 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 4 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 1 53 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 6 57 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 6 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 12 61 u a - - MP 60 59 6 64 6 2 10 55 74 -9.997 -9.936 -0.011 -8.713 -8.992 -9.387 -3.305 -3.140 -3.412 1.233 -3.098 -4.229 1.121 -3.531 -3.461 1.707 -3.983 -0.382 2.479 -3.526 -0.400 -1.727 ML 61 59 6 64 6 1 4 54 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 4 54 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 1 52 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 5 55 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 5 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 13 60 G C - - MP 66 65 6 70 6 2 9 53 72 -9.997 -9.936 -0.011 -8.713 -8.992 -9.387 -5.084 -2.891 -5.014 1.296 -6.187 -5.349 -1.250 -5.585 -5.030 3.506 -5.331 -0.156 -1.504 -4.802 -3.270 -3.929 ML 67 65 6 70 6 1 4 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 3 52 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 5 53 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 5 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 14 59 u a - - MP 72 71 6 76 4 2 7 51 70 -8.641 -8.848 -0.016 -7.262 -2.712 -4.542 -4.615 -0.590 -3.543 -5.310 2.502 -4.225 -4.558 -0.404 -5.013 -2.340 2.790 -4.841 0.256 -3.375 ML 73 71 6 76 4 1 3 52 71 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 4 1 1 52 71 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 75 71 6 76 4 0 0 51 70 -4.568 -4.250 -2.265 -0.520 IL 76 76 5 76 4 1 4 53 72 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 77 77 6 77 3 1 4 52 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 15 - C - - - ML 78 77 6 80 3 1 6 49 67 -9.584 -0.007 -8.238 -4.828 1.954 -5.378 -3.910 D 79 77 6 80 3 0 0 48 66 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 3 51 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 16 - a - - - ML 81 80 3 83 3 1 5 48 66 -9.584 -0.007 -8.238 0.912 -1.628 -1.673 0.567 D 82 80 3 83 3 0 0 47 65 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 3 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 17 - C - - - ML 84 83 3 86 3 1 5 46 65 -9.584 -0.007 -8.238 0.277 1.244 -3.064 -1.736 D 85 83 3 86 3 0 0 46 64 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 2 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 18 - U - - - ML 87 86 3 89 3 1 4 45 64 -9.584 -0.007 -8.238 -3.572 -2.794 -4.322 1.896 D 88 86 3 89 3 0 0 45 63 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 2 48 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 19 - G - - - ML 90 89 3 92 3 1 4 44 63 -9.910 -0.006 -8.227 -2.684 -5.036 1.913 -4.400 D 91 89 3 92 3 0 0 43 61 -5.620 -0.734 -1.403 IL 92 92 3 92 3 1 1 45 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 58 - U - - MR 93 92 3 95 3 1 3 43 62 -9.910 -0.006 -8.227 -1.975 -2.221 -3.460 1.783 D 94 92 3 95 3 0 0 42 60 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 44 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 57 - A - - MR 96 95 3 98 3 1 3 42 61 -9.910 -0.006 -8.227 1.965 -5.260 -4.699 -4.958 D 97 95 3 98 3 0 0 41 59 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 56 - A - - MR 99 98 3 101 3 1 2 41 60 -9.910 -0.006 -8.227 1.934 -4.465 -4.223 -3.626 D 100 98 3 101 3 0 0 40 58 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 55 - G - - MR 102 101 3 104 5 1 2 40 59 -8.584 -0.014 -8.399 -8.612 -9.503 -3.688 -4.036 1.931 -4.354 D 103 101 3 104 5 0 0 39 57 -5.352 -0.707 -2.978 -4.409 -2.404 IR 104 104 3 104 5 1 1 41 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 20 54 U G - - MP 105 104 3 109 6 2 3 39 58 -9.997 -9.936 -0.011 -8.713 -8.992 -9.387 -6.120 -6.253 -5.608 -2.401 -2.250 -5.863 1.839 -4.943 -5.671 -2.301 -5.869 -4.379 1.295 -6.053 3.190 -4.474 ML 106 104 3 109 6 1 1 38 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 3 109 6 1 1 38 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 3 109 6 0 0 36 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 39 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 39 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 21 53 C G - - MP 111 110 6 115 6 2 2 37 56 -9.997 -9.936 -0.011 -8.713 -8.992 -9.387 -4.550 -4.160 -4.536 -0.202 -3.625 -5.346 3.138 -2.936 -4.461 1.768 -4.946 -1.127 0.502 -4.738 -1.149 -3.242 ML 112 110 6 115 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 37 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 37 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 22 52 a u - - MP 117 116 6 121 6 2 2 35 54 -9.997 -9.936 -0.011 -8.713 -8.992 -9.387 -3.044 -3.120 -4.230 2.757 -5.140 -4.964 -0.471 -4.781 -4.514 2.467 -4.858 0.242 -0.011 -4.199 -2.434 -3.182 ML 118 116 6 121 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 34 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 35 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 23 51 U A - - MP 123 122 6 127 4 2 2 33 52 -8.641 -8.848 -0.040 -5.444 -7.176 -7.316 -6.643 -3.497 -2.605 -6.876 -0.773 -5.969 -6.669 -3.405 -6.897 -5.486 3.845 -7.044 -0.817 -4.917 ML 124 122 6 127 4 1 1 35 54 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 4 1 1 34 53 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 126 122 6 127 4 0 0 33 52 -4.568 -4.250 -2.265 -0.520 IL 127 127 5 127 4 1 1 36 55 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 128 128 6 128 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 24 - U - - - ML 129 128 6 131 3 1 1 31 48 -9.561 -0.007 -8.215 -2.682 -2.406 -2.187 1.781 D 130 128 6 131 3 0 0 30 48 -6.717 -0.925 -1.109 IL 131 131 3 131 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 25 - A - - - ML 132 131 3 134 3 1 1 30 47 -9.584 -0.087 -4.125 1.934 -4.647 -3.442 -4.442 D 133 131 3 134 3 0 0 29 48 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 26 - C - - - ML 135 134 3 137 3 1 1 29 46 -9.831 -0.007 -8.149 -2.108 1.667 -3.568 -0.980 D 136 134 3 137 3 0 0 28 45 -6.572 -0.333 -2.355 IL 137 137 3 137 3 1 1 30 47 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 50 - U - - MR 138 137 3 140 3 1 1 28 45 -9.910 -0.006 -8.227 -0.740 -2.320 -2.557 1.600 D 139 137 3 140 3 0 0 26 43 -6.390 -1.568 -0.620 IR 140 140 3 140 3 1 1 29 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 49 - A - - MR 141 140 3 143 5 1 1 27 44 -5.343 -0.046 -8.399 -8.612 -9.503 1.553 -2.086 -1.670 -0.956 D 142 140 3 143 5 0 0 25 43 -5.352 -0.707 -2.978 -4.409 -2.404 IR 143 143 3 143 5 1 1 28 45 -1.806 -0.824 -6.384 -3.091 -5.658 0.000 0.000 0.000 0.000 [ MATP 38 ] 27 45 C G - - MP 144 143 3 148 6 2 2 25 43 -9.983 -9.922 -0.011 -8.699 -8.979 -9.374 -5.867 -5.878 -5.455 -1.912 -3.973 -5.797 3.239 -4.814 -5.478 -1.760 -5.732 -3.802 2.370 -5.851 -1.093 -4.259 ML 145 143 3 148 6 1 1 24 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 3 148 6 1 1 24 41 -7.251 -5.980 -1.195 -5.958 -1.092 -4.172 0.037 -0.395 -0.560 0.619 D 147 143 3 148 6 0 0 22 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 25 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 25 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 28 44 c g - - MP 150 149 6 154 6 2 2 23 41 -6.647 -3.940 -0.126 -8.713 -7.776 -9.387 -3.701 -3.648 -2.404 0.199 -3.105 -4.637 2.903 -3.664 -3.757 0.668 -4.294 -1.609 1.740 -3.961 -0.537 -0.617 ML 151 149 6 154 6 1 1 22 39 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 22 39 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 21 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 23 40 -2.798 -1.941 -0.979 -4.716 -5.492 -5.153 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 22 40 -3.262 -0.320 -6.773 -4.941 -4.232 0.000 0.000 0.000 0.000 [ MATP 40 ] 30 42 a u - - MP 156 155 6 160 4 2 2 21 39 -5.974 -4.282 -0.118 -6.468 -3.024 -2.695 -2.890 2.092 -2.887 -3.989 2.075 -2.890 -3.204 1.311 -3.743 -0.626 1.357 -3.286 -0.764 -2.238 ML 157 155 6 160 4 1 1 21 38 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 4 1 1 20 37 -4.899 -3.928 -1.522 -0.856 0.248 -0.364 -0.326 0.308 D 159 155 6 160 4 0 0 20 37 -2.394 -4.492 -2.508 -0.763 IL 160 160 5 160 4 1 1 22 39 -2.085 -2.211 -0.937 -5.254 0.000 0.000 0.000 0.000 IR 161 161 6 161 3 1 1 21 38 -1.910 -0.529 -4.610 0.000 0.000 0.000 0.000 [ MATL 41 ] 32 - C - - - ML 162 161 6 164 3 1 1 18 36 -3.683 -0.129 -7.020 -1.082 1.251 -2.242 -0.096 D 163 161 6 164 3 0 0 16 34 -6.349 -1.362 -0.740 IL 164 164 3 164 3 1 1 19 37 -2.069 -0.464 -4.769 0.000 0.000 0.000 0.000 [ MATL 42 ] 34 - u - - - ML 165 164 3 167 3 1 1 17 35 -3.272 -0.202 -5.192 0.480 -0.872 -0.699 0.529 D 166 164 3 167 3 0 0 15 33 -6.343 -1.371 -0.734 IL 167 167 3 167 3 1 1 17 35 -2.230 -0.407 -4.930 0.000 0.000 0.000 0.000 [ MATL 43 ] 36 - u - - - ML 168 167 3 170 3 1 1 16 33 -4.687 -0.075 -6.440 0.366 -0.441 -1.265 0.641 D 169 167 3 170 3 0 0 14 32 -6.922 -0.762 -1.314 IL 170 170 3 170 3 1 1 17 34 -1.777 -0.592 -4.477 0.000 0.000 0.000 0.000 [ MATL 44 ] 38 - a - - - ML 171 170 3 173 3 1 1 14 32 -9.573 -0.109 -3.807 0.389 -1.128 0.345 -0.055 D 172 170 3 173 3 0 0 14 33 -6.467 -1.193 -0.859 IL 173 173 3 173 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 39 - u - - - ML 174 173 3 176 3 1 1 12 30 -9.483 -0.007 -8.137 0.159 -0.938 -0.991 0.894 D 175 173 3 176 3 0 0 12 31 -7.720 -1.230 -0.813 IL 176 176 3 176 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 40 - U - - - ML 177 176 3 179 2 1 1 1 1 * 0.000 -1.014 -1.874 0.257 1.027 D 178 176 3 179 2 0 0 0 0 * 0.000 IL 179 179 3 179 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 47 ] - - - - - - E 180 179 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME Transposase-1 ACC RF03014 DESC Transposase-1 RNA LENG 59 MAXL 120 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 07:12:39 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03014/CM NSEQ 176 EFFN 25.499268 CKSUM 2749167138 STATS LOCAL MSV -7.5343 0.71903 STATS LOCAL VITERBI -8.0455 0.71903 STATS LOCAL FORWARD -4.0547 0.71903 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.29057 1.68118 1.39373 1.23587 1.38629 1.38629 1.38629 1.38629 0.01181 5.55329 4.84475 1.46634 0.26236 0.00000 * 1 3.40955 0.39544 4.43187 1.26703 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.49039 5.54929 0.95784 1.46634 0.26236 1.39402 0.28512 2 2.51663 2.14721 0.31947 2.57798 2 G - - : 1.38629 1.38629 1.38629 1.38629 0.01263 5.07153 5.07153 1.46634 0.26236 4.62172 0.00988 3 1.78203 3.00073 3.77861 0.27562 3 U - - : 1.38629 1.38629 1.38629 1.38629 0.02165 5.07153 4.18980 1.46634 0.26236 1.27146 0.32909 4 2.56268 3.34997 4.23488 0.13544 4 U - - : 1.38629 1.38629 1.38629 1.38629 0.01084 5.22312 5.22312 1.46634 0.26236 0.14271 2.01742 5 0.37727 1.42372 3.53639 3.11597 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.00803 5.52160 5.52160 1.46634 0.26236 2.40253 0.09485 6 0.37753 2.96159 1.39594 4.19217 6 A - - : 1.38629 1.38629 1.38629 1.38629 0.00803 5.52160 5.52160 1.46634 0.26236 2.40253 0.09485 7 3.23722 3.24332 0.16367 2.62180 7 G - - : 1.38629 1.38629 1.38629 1.38629 0.00803 5.52160 5.52160 1.46634 0.26236 2.40253 0.09485 8 0.00872 6.12115 5.67035 5.79574 8 A - - : 1.38629 1.38629 1.38629 1.38629 0.00803 5.52160 5.52160 1.46634 0.26236 0.19964 1.70939 9 3.02890 5.56572 0.05974 5.15111 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 10 1.08128 1.64178 1.43473 1.47392 10 a - - < 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 11 2.02240 1.68029 2.75841 0.48135 11 U - - < 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 12 1.84996 2.42978 1.33458 0.71043 12 u - - < 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 13 1.82478 4.49806 0.20507 4.34074 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 14 3.80515 0.99399 4.17653 0.52375 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 15 5.66662 0.01251 5.97941 5.04425 15 C - - - 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 16 0.65909 3.12322 3.07851 0.93487 16 A - - - 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 17 1.14227 0.42448 4.94215 3.92913 17 C - - - 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 18 4.77168 3.75505 5.29207 0.03759 18 U - - - 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 19 3.42817 5.99600 0.04002 5.45129 19 G - - - 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 20 5.27041 1.55355 5.17020 0.25144 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 21 3.89914 0.37692 1.35533 3.32676 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 22 0.61048 3.87042 0.97876 2.80874 22 A - - < 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 23 5.30944 3.04227 5.24567 0.05969 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.02557 5.55329 3.84563 1.46634 0.26236 1.09861 0.40547 24 4.02814 3.58946 2.94126 0.10338 24 U - - - 1.38629 1.38629 1.38629 1.38629 0.00792 5.53564 5.53564 1.46634 0.26236 0.30938 1.32390 25 0.02355 5.65765 4.16412 5.46256 25 A - - - 1.38629 1.38629 1.38629 1.38629 0.06888 5.55329 2.76958 1.46634 0.26236 1.09861 0.40547 26 3.16554 0.17206 4.64341 2.24192 26 C - - - 1.38629 1.38629 1.38629 1.38629 0.02439 5.49268 3.91322 1.46634 0.26236 0.11655 2.20712 27 5.09938 0.46561 4.98649 1.02354 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.00790 5.53826 5.53826 1.46634 0.26236 0.34513 1.23144 28 2.83213 0.57303 2.39647 1.25087 28 C - - < 1.38629 1.38629 1.38629 1.38629 0.01959 4.47631 4.82545 0.58149 0.81886 1.09861 0.40547 29 1.05198 1.21691 1.74247 1.71745 30 a - - < 1.38629 1.38629 1.38629 1.38629 0.03429 3.69416 4.72869 0.28804 1.38523 0.67595 0.71065 30 2.36210 0.42302 3.31025 1.54082 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.10089 2.43838 4.74854 0.08693 2.48576 0.63152 0.75882 31 1.01066 2.16517 1.94657 0.97146 34 u - - _ 1.38629 1.38629 1.38629 1.38629 0.15700 2.16080 3.50453 0.06625 2.74724 0.64123 0.74790 32 1.09984 1.73821 2.54878 0.88415 36 u - - _ 1.38629 1.38629 1.38629 1.38629 0.05947 3.10340 4.35508 0.16867 1.86295 0.23033 1.58119 33 1.08913 2.40411 1.05477 1.49221 38 g - - _ 1.38629 1.38629 1.38629 1.38629 0.08558 5.54462 2.54965 1.46634 0.26236 0.48218 0.96086 34 1.27865 2.24308 2.21870 0.67983 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00840 5.47689 5.47689 1.46634 0.26236 0.76454 0.62651 35 2.63258 3.56036 1.09670 0.56968 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.06368 2.85312 5.51478 0.13425 2.07443 0.17063 1.85237 36 1.82981 1.92039 1.16583 0.96406 42 u - - > 1.38629 1.38629 1.38629 1.38629 0.12944 2.14099 5.55329 0.06467 2.77056 1.09861 0.40547 37 1.54861 2.49681 0.51149 2.24897 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 38 1.07552 4.98381 0.44478 4.50419 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.03342 3.54058 5.55329 0.86290 0.54808 1.09861 0.40547 39 0.23505 3.35175 2.78743 2.18159 49 A - - - 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 40 1.91209 3.84756 3.70341 0.21535 50 U - - - 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 41 0.10588 5.38004 2.41255 5.07191 51 A - - > 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 42 2.79663 1.17911 3.67477 0.50075 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 43 3.57631 1.44359 0.37702 2.99497 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 44 1.85300 5.31564 0.18416 5.03334 54 G - - > 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 45 4.98683 4.38449 0.02384 5.45874 55 G - - - 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 46 0.02421 5.47850 5.33506 4.20476 56 A - - - 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 47 0.00842 6.15894 5.70535 5.82885 57 A - - - 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 48 2.95644 3.30785 4.54171 0.10453 58 U - - - 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 49 0.63726 4.34480 0.81502 4.15711 59 A - - > 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 50 4.56476 0.26101 4.31803 1.57993 60 C - - > 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 51 0.81415 1.51804 2.09465 1.53837 61 a - - > 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 52 0.84731 2.78931 0.96650 2.04364 62 a - - > 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 53 1.65492 1.55333 1.45427 1.01121 63 u - - > 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 54 5.33938 2.06524 5.33052 0.14668 64 U - - > 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 55 3.57277 3.74332 0.06268 4.71030 65 G - - : 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 56 1.16609 2.56639 2.79695 0.59673 66 U - - : 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 57 1.42859 2.39559 2.97372 0.48107 67 U - - : 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 58 1.91016 4.29640 0.22202 3.28532 68 G - - : 1.38629 1.38629 1.38629 1.38629 0.00778 5.55329 5.55329 1.46634 0.26236 1.09861 0.40547 59 0.05224 4.75263 4.09032 3.66781 69 A - - : 1.38629 1.38629 1.38629 1.38629 0.00390 5.54941 * 1.46634 0.26236 0.00000 * //