INFERNAL1/a [1.1.4 | Dec 2020] NAME Mu-gpT-DE ACC RF03012 DESC Mu-gpT-DE RNA STATES 163 NODES 46 CLEN 53 W 81 ALPH RNA RF no CONS yes MAP yes DATE Tue Dec 18 16:01:57 2018 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 316 EFFN 8.664734 CKSUM 150689836 NULL 0.000 0.000 0.000 0.000 GA 50.20 TC 50.20 NC 49.70 EFP7GF -17.2540 0.71922 ECMLC 0.61798 -8.31250 1.78412 1600000 615149 0.001951 ECMGC 0.44378 -18.82200 -5.69912 1600000 135280 0.002957 ECMLI 0.65146 -6.50986 2.59896 1600000 453227 0.002648 ECMGI 0.46416 -15.03032 -3.13228 1600000 100111 0.003996 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 81 115 -8.490 -8.697 -0.018 -7.112 IL 1 1 2 1 4 1 18 84 118 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 18 83 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 18 81 115 -9.766 -0.007 -8.084 -1.546 1.350 -2.962 -0.030 D 4 2 3 5 3 0 12 80 114 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 16 82 116 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 67 - G - - MR 6 5 3 8 3 1 17 80 114 -9.766 -0.007 -8.084 -4.067 -5.574 1.957 -4.801 D 7 5 3 8 3 0 10 78 112 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 15 81 115 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 66 - U - - MR 9 8 3 11 3 1 16 79 113 -9.766 -0.007 -8.084 -4.070 -3.707 -4.868 1.937 D 10 8 3 11 3 0 9 77 111 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 14 80 114 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 65 - A - - MR 12 11 3 14 3 1 15 78 112 -4.292 -0.087 -7.089 1.959 -5.041 -4.488 -4.750 D 13 11 3 14 3 0 8 76 110 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 14 79 113 -1.749 -0.580 -4.900 0.000 0.000 0.000 0.000 [ MATR 5 ] - 62 - C - - MR 15 14 3 17 3 1 15 77 111 -9.761 -0.007 -8.079 -0.332 1.208 -2.565 -0.461 D 16 14 3 17 3 0 8 75 109 -6.503 -1.369 -0.732 IR 17 17 3 17 3 1 13 78 111 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 61 - A - - MR 18 17 3 20 3 1 14 76 110 -9.766 -0.007 -8.084 1.093 -1.055 -1.663 0.097 D 19 17 3 20 3 0 7 74 108 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 12 77 110 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 60 - a - - MR 21 20 3 23 3 1 13 75 109 -9.766 -0.007 -8.084 0.315 0.164 -0.383 -0.202 D 22 20 3 23 3 0 6 73 107 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 11 76 109 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 59 - u - - MR 24 23 3 26 3 1 12 74 108 -9.766 -0.007 -8.084 0.138 -0.105 -1.659 0.725 D 25 23 3 26 3 0 6 72 106 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 10 75 108 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 58 - U - - MR 27 26 3 29 3 1 12 73 107 -9.766 -0.010 -7.497 -0.112 -0.885 -1.726 1.158 D 28 26 3 29 3 0 5 71 105 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 9 74 107 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 57 - A - - MR 30 29 3 32 3 1 11 72 106 -9.763 -0.007 -8.081 1.757 -2.625 -2.674 -1.727 D 31 29 3 32 3 0 4 70 104 -6.448 -1.460 -0.678 IR 32 32 3 32 3 1 9 73 106 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 56 - G - - MR 33 32 3 35 3 1 11 71 105 -9.766 -0.007 -8.084 -4.067 -5.574 1.957 -4.801 D 34 32 3 35 3 0 4 69 103 -6.390 -1.568 -0.620 IR 35 35 3 35 3 1 8 72 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 55 - A - - MR 36 35 3 38 5 1 10 70 104 -3.091 -0.193 -8.259 -8.471 -9.363 1.959 -5.041 -4.488 -4.750 D 37 35 3 38 5 0 3 69 102 -5.352 -0.707 -2.978 -4.409 -2.404 IR 38 38 3 38 5 1 8 70 104 -3.271 -0.252 -6.783 -4.950 -6.056 0.000 0.000 0.000 0.000 [ MATP 13 ] 2 53 C G - - MP 39 38 3 43 6 2 11 69 103 -9.898 -9.837 -0.012 -8.614 -8.894 -9.289 -6.833 -7.039 -6.100 -3.232 -4.470 -6.214 3.884 -5.495 -6.299 -3.173 -6.263 -5.294 -1.271 -6.706 -1.324 -5.097 ML 40 38 3 43 6 1 5 67 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 3 43 6 1 5 67 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 3 43 6 0 1 64 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 6 69 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 6 68 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 3 52 C G - - MP 45 44 6 49 6 2 9 67 101 -9.898 -9.837 -0.012 -8.614 -8.894 -9.289 -5.698 -5.701 -5.306 -1.740 -3.842 -5.662 3.565 -2.772 -5.325 -1.587 -5.588 -3.620 1.400 -5.694 -1.370 -4.109 ML 46 44 6 49 6 1 5 65 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 4 65 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 1 63 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 6 67 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 6 66 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 4 51 U A - - MP 51 50 6 55 6 2 7 65 99 -9.898 -9.837 -0.012 -8.614 -8.894 -9.289 -8.086 -7.970 -7.546 -4.264 -6.022 -7.808 -1.768 -6.883 -7.475 -4.316 -7.776 -5.918 3.946 -7.935 -3.505 -5.143 ML 52 50 6 55 6 1 4 64 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 3 63 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 1 61 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 5 65 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 5 64 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 5 50 G C - - MP 57 56 6 61 4 2 6 63 97 -8.490 -8.697 -0.018 -7.112 -6.771 -4.277 -7.297 -0.358 -8.166 -5.694 -2.997 -7.531 -5.638 3.864 -5.898 -2.069 -3.297 -5.893 -5.185 -6.137 ML 58 56 6 61 4 1 3 62 96 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 4 1 2 62 96 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 60 56 6 61 4 0 1 61 94 -4.568 -4.250 -2.265 -0.520 IL 61 61 5 61 4 1 4 64 97 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 62 62 6 62 3 1 4 63 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 6 - A - - - ML 63 62 6 65 3 1 4 61 95 -9.766 -0.007 -8.084 1.959 -5.041 -4.488 -4.750 D 64 62 6 65 3 0 0 60 93 -5.620 -0.734 -1.403 IL 65 65 3 65 3 1 3 62 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 49 - A - - MR 66 65 3 68 3 1 3 60 94 -9.766 -0.007 -8.084 1.959 -5.041 -4.488 -4.750 D 67 65 3 68 3 0 0 58 92 -6.390 -1.568 -0.620 IR 68 68 3 68 3 1 2 61 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 48 - G - - MR 69 68 3 71 3 1 2 59 93 -9.766 -0.131 -3.550 -4.067 -5.574 1.957 -4.801 D 70 68 3 71 3 0 0 57 91 -6.390 -1.568 -0.620 IR 71 71 3 71 3 1 2 60 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 47 - c - - MR 72 71 3 74 3 1 3 58 92 -9.643 -0.010 -7.447 0.657 0.840 -2.345 -1.196 D 73 71 3 74 3 0 0 57 91 -7.881 -0.481 -1.841 IR 74 74 3 74 3 1 1 59 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 46 - A - - MR 75 74 3 77 3 1 3 57 91 -9.755 -0.007 -8.073 1.766 -2.678 -2.468 -1.939 D 76 74 3 77 3 0 0 55 89 -6.615 -1.208 -0.845 IR 77 77 3 77 3 1 1 58 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 45 - C - - MR 78 77 3 80 3 1 2 56 90 -9.766 -0.007 -8.084 -4.642 1.948 -5.222 -3.718 D 79 77 3 80 3 0 0 54 88 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 1 57 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 44 - C - - MR 81 80 3 83 3 1 2 55 89 -9.766 -0.007 -8.084 -4.642 1.948 -5.222 -3.718 D 82 80 3 83 3 0 0 53 87 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 1 56 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 43 - G - - MR 84 83 3 86 3 1 1 54 88 -5.690 -0.135 -3.834 -2.101 -0.716 1.579 -2.543 D 85 83 3 86 3 0 0 52 86 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 1 55 88 -2.137 -0.465 -4.376 0.000 0.000 0.000 0.000 [ MATR 25 ] - 41 - A - - MR 87 86 3 89 3 1 1 53 87 -9.667 -0.007 -7.985 1.378 -1.763 -1.836 -0.276 D 88 86 3 89 3 0 0 52 86 -7.696 -0.517 -1.754 IR 89 89 3 89 3 1 1 54 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 40 - U - - MR 90 89 3 92 3 1 1 52 86 -9.761 -0.007 -8.078 -0.428 -1.819 -2.250 1.466 D 91 89 3 92 3 0 0 50 84 -6.504 -1.367 -0.734 IR 92 92 3 92 3 1 1 53 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 39 - c - - MR 93 92 3 95 3 1 1 51 85 -9.766 -0.007 -8.084 -0.711 0.775 -2.083 0.528 D 94 92 3 95 3 0 0 49 83 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 52 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 38 - A - - MR 96 95 3 98 3 1 1 50 84 -9.766 -0.007 -8.084 1.422 -1.802 -2.041 -0.339 D 97 95 3 98 3 0 0 48 82 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 51 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 37 - C - - MR 99 98 3 101 3 1 1 49 83 -9.766 -0.007 -8.084 -4.642 1.948 -5.222 -3.718 D 100 98 3 101 3 0 0 47 81 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 1 50 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 36 - A - - MR 102 101 3 104 5 1 1 48 82 -8.444 -0.015 -8.259 -8.471 -9.363 1.959 -5.041 -4.488 -4.750 D 103 101 3 104 5 0 0 47 80 -5.352 -0.707 -2.978 -4.409 -2.404 IR 104 104 3 104 5 1 1 48 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 7 35 C G - - MP 105 104 3 109 6 2 2 47 81 -9.898 -9.837 -0.012 -8.614 -8.894 -9.289 -7.629 -7.786 -6.693 -4.021 -5.050 -6.704 3.945 -6.307 -7.104 -3.993 -6.741 -5.996 -2.107 -7.526 -3.109 -5.908 ML 106 104 3 109 6 1 1 45 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 3 109 6 1 1 45 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 3 109 6 0 0 42 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 47 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 46 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 8 34 A U - - MP 111 110 6 115 6 2 2 45 79 -9.898 -9.837 -0.012 -8.614 -8.894 -9.289 -5.130 -4.047 -5.206 3.490 -5.474 -6.830 -1.071 -5.150 -4.949 0.069 -5.519 -1.436 1.285 -5.964 -3.056 -3.917 ML 112 110 6 115 6 1 1 43 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 43 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 6 115 6 0 0 40 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 45 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 44 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 9 33 G C - - MP 117 116 6 121 6 2 2 43 77 -9.898 -9.837 -0.012 -8.614 -8.894 -9.289 -4.675 -3.097 -4.540 1.514 -5.627 -4.604 -0.695 -5.199 -4.758 3.394 -5.008 -0.240 -0.965 -4.098 -2.714 -3.501 ML 118 116 6 121 6 1 1 42 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 41 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 38 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 43 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 42 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 10 32 c g - - MP 123 122 6 127 6 2 2 41 75 -9.898 -9.837 -0.040 -8.614 -8.894 -5.583 -2.268 -2.245 -2.365 1.305 -1.949 -3.303 1.967 -2.011 -2.503 0.851 -2.943 -0.403 1.749 -2.596 0.734 -1.546 ML 124 122 6 127 6 1 1 40 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 39 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 37 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 41 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 40 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 11 31 c g - - MP 129 128 6 133 4 2 2 39 73 -8.446 -8.654 -0.064 -4.725 -2.504 -2.853 -2.754 0.430 -2.748 -4.036 2.606 -3.239 -3.190 0.717 -3.485 -0.583 1.875 -3.339 0.368 -2.216 ML 130 128 6 133 4 1 1 39 72 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 4 1 1 38 71 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 132 128 6 133 4 0 0 36 70 -5.179 -4.861 -2.876 -0.319 IL 133 133 5 133 4 1 1 40 73 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 134 134 6 134 3 1 1 39 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 12 - g - - - ML 135 134 6 137 3 1 1 37 71 -9.351 -0.044 -5.147 0.139 -1.327 0.868 -0.566 D 136 134 6 137 3 0 0 34 68 -7.488 -2.214 -0.361 IL 137 137 3 137 3 1 1 38 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 13 - C - - - ML 138 137 3 140 3 1 1 36 70 -2.569 -0.273 -7.983 -1.561 1.326 -1.113 -0.532 D 139 137 3 140 3 0 0 31 63 -7.685 -0.400 -2.076 IL 140 140 3 140 3 1 1 39 72 -0.793 -1.292 -6.089 0.000 0.000 0.000 0.000 [ MATL 38 ] 18 - A - - - ML 141 140 3 143 3 1 1 31 62 -9.437 -0.007 -8.091 1.635 -1.988 -1.441 -1.869 D 142 140 3 143 3 0 0 29 60 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 32 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 19 - U - - - ML 144 143 3 146 3 1 1 30 61 -9.437 -0.007 -8.091 -0.732 -0.550 -2.012 1.303 D 145 143 3 146 3 0 0 29 60 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 31 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 20 - u - - - ML 147 146 3 149 3 1 1 29 60 -9.437 -0.007 -8.091 0.046 -0.638 0.150 0.281 D 148 146 3 149 3 0 0 28 59 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 30 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 21 - g - - - ML 150 149 3 152 3 1 1 28 59 -9.437 -0.196 -2.995 0.044 -0.477 0.507 -0.271 D 151 149 3 152 3 0 0 28 59 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 29 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 22 - u - - - ML 153 152 3 155 3 1 1 27 58 -2.955 -0.269 -4.607 -0.457 -0.339 -0.674 0.891 D 154 152 3 155 3 0 0 28 59 -0.797 -2.549 -1.979 IL 155 155 3 155 3 1 1 29 60 -0.861 -1.352 -4.116 0.000 0.000 0.000 0.000 [ MATL 43 ] 29 - G - - - ML 156 155 3 158 3 1 1 12 31 -9.322 -0.095 -4.006 -1.094 -1.139 1.421 -1.325 D 157 155 3 158 3 0 0 12 31 -7.745 -1.542 -0.617 IL 158 158 3 158 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 30 - u - - - ML 159 158 3 161 2 1 1 1 1 * 0.000 -0.702 0.524 -1.202 0.597 D 160 158 3 161 2 0 0 0 0 * 0.000 IL 161 161 3 161 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 45 ] - - - - - - E 162 161 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME Mu-gpT-DE ACC RF03012 DESC Mu-gpT-DE RNA LENG 53 MAXL 118 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Dec 18 16:01:57 2018 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED NSEQ 316 EFFN 14.074768 CKSUM 150689836 STATS LOCAL MSV -7.3662 0.71922 STATS LOCAL VITERBI -8.1285 0.71922 STATS LOCAL FORWARD -3.8955 0.71922 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.21038 1.34967 1.43159 1.59130 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 0.00000 * 1 2.65575 0.40037 3.84700 1.43406 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 2 4.98358 0.05900 4.92127 3.14309 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 3 4.36466 0.22779 4.20785 1.73666 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 4 5.80867 4.73249 5.87697 0.01472 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 5 3.02753 5.04834 0.06361 4.99504 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 6 0.01598 5.47564 5.06692 5.22762 6 A - - - 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 7 5.65755 0.01927 5.64155 4.41900 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 8 0.27501 4.20527 2.74234 1.82571 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 9 1.63296 3.37878 0.31305 3.23543 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 10 1.64388 1.26412 1.77724 1.03513 10 u - - < 1.38629 1.38629 1.38629 1.38629 0.04266 5.26882 3.30743 1.46634 0.26236 1.09861 0.40547 11 2.35360 0.84493 1.95603 1.09671 11 c - - < 1.38629 1.38629 1.38629 1.38629 0.04348 5.23685 3.29052 1.46634 0.26236 2.20928 0.11629 12 1.29988 2.44801 0.71406 1.88838 12 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03804 5.20441 3.44717 1.46634 0.26236 1.67262 0.20795 13 2.81616 0.39597 2.15788 1.88674 13 C - - _ 1.38629 1.38629 1.38629 1.38629 0.21343 1.67874 5.18803 1.05943 0.42565 0.11729 2.20117 14 0.21009 2.93242 2.47437 2.95642 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 15 1.99178 1.80115 3.04448 0.42953 19 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 16 1.38673 1.86872 1.23292 1.18959 20 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 17 1.38316 1.71456 0.97326 1.65380 21 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04334 5.26882 3.28983 1.46634 0.26236 1.09861 0.40547 18 1.81137 1.63181 1.86029 0.72285 22 u - - _ 1.38629 1.38629 1.38629 1.38629 0.27094 1.62976 3.18541 0.84883 0.55847 0.78480 0.60920 19 2.34672 2.18547 0.34364 2.49244 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.08374 5.21705 2.59149 1.46634 0.26236 1.81626 0.17749 20 2.03154 0.95809 2.30691 0.95276 30 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01165 5.15131 5.15131 1.46634 0.26236 0.40140 1.10680 21 1.35235 2.25092 0.67171 2.07758 31 G - - > 1.38629 1.38629 1.38629 1.38629 0.01069 5.23685 5.23685 1.46634 0.26236 0.24790 1.51613 22 1.38206 2.02637 0.97636 1.42525 32 g - - > 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 23 3.51592 0.37133 3.21057 1.42659 33 C - - > 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 24 1.84535 2.99672 4.01438 0.25615 34 U - - > 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 25 4.67474 5.82867 0.01611 5.59757 35 G - - > 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 26 0.01598 5.47564 5.06692 5.22762 36 A - - - 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 27 5.09024 0.02227 5.42907 4.46755 37 C - - - 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 28 0.34214 2.91183 3.13975 1.64983 38 A - - - 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 29 1.99509 0.78537 3.13791 1.00875 39 c - - - 1.38629 1.38629 1.38629 1.38629 0.01450 5.26882 4.68333 1.46634 0.26236 1.09861 0.40547 30 1.70963 2.97136 3.28625 0.31411 40 U - - - 1.38629 1.38629 1.38629 1.38629 0.08329 5.26471 2.59370 1.46634 0.26236 1.33391 0.30577 31 0.36753 2.90276 2.95307 1.60692 41 A - - - 1.38629 1.38629 1.38629 1.38629 0.03338 3.60183 5.19260 0.36721 1.17981 0.12323 2.15469 32 3.36400 1.80436 0.25336 3.70357 43 G - - - 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 33 5.09024 0.02227 5.42907 4.46755 44 C - - - 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 34 5.09024 0.02227 5.42907 4.46755 45 C - - - 1.38629 1.38629 1.38629 1.38629 0.01888 5.26882 4.30126 1.46634 0.26236 1.09861 0.40547 35 0.13340 3.48986 3.32222 2.84204 46 A - - - 1.38629 1.38629 1.38629 1.38629 0.09943 5.26038 2.41405 1.46634 0.26236 1.24151 0.34101 36 0.88582 0.72265 3.52607 2.62082 47 c - - - 1.38629 1.38629 1.38629 1.38629 0.01139 5.17427 5.17427 1.46634 0.26236 0.10256 2.32814 37 4.68054 5.79802 0.01804 5.19080 48 G - - - 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 38 0.01598 5.47564 5.06692 5.22762 49 A - - - 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 39 5.05379 0.07220 4.92792 2.88187 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 40 0.01854 6.01990 4.47795 5.38557 51 A - - > 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 41 1.81932 4.34654 0.22191 3.73296 52 G - - > 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 42 3.80494 5.00510 0.03857 4.72504 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.15095 2.00277 5.26881 0.07464 2.63215 1.09861 0.40547 43 0.01598 5.47564 5.06692 5.22762 55 A - - : 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 44 4.68054 5.79802 0.01804 5.19080 56 G - - : 1.38629 1.38629 1.38629 1.38629 0.01242 5.26882 4.93458 1.46634 0.26236 1.09861 0.40547 45 0.13987 3.45641 3.53708 2.66082 57 A - - : 1.38629 1.38629 1.38629 1.38629 0.01037 5.26677 5.26677 1.46634 0.26236 0.88862 0.52971 46 1.47883 2.09511 2.80633 0.52999 58 U - - : 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 47 1.29003 1.44736 2.78104 0.84963 59 u - - : 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 48 1.16363 1.21620 1.64607 1.61702 60 a - - : 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 49 0.56782 2.23475 2.79460 1.32771 61 A - - : 1.38629 1.38629 1.38629 1.38629 0.01445 5.26882 4.68933 1.46634 0.26236 1.09861 0.40547 50 1.64030 0.48075 3.60556 1.82892 62 C - - : 1.38629 1.38629 1.38629 1.38629 0.06793 2.80502 5.26476 0.52140 0.90064 0.75159 0.63793 51 0.01598 5.47564 5.06692 5.22762 65 A - - : 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 52 4.83723 4.53351 5.40798 0.02342 66 U - - : 1.38629 1.38629 1.38629 1.38629 0.01035 5.26882 5.26882 1.46634 0.26236 1.09861 0.40547 53 4.68054 5.79802 0.01804 5.19080 67 G - - : 1.38629 1.38629 1.38629 1.38629 0.00519 5.26365 * 1.46634 0.26236 0.00000 * //