INFERNAL1/a [1.1.5 | Sep 2023] NAME Lacto-phage-1 ACC RF03004 DESC Lacto-phage-1 RNA STATES 257 NODES 78 CLEN 81 W 100 ALPH RNA RF no CONS yes MAP yes DATE Tue Jul 16 19:23:04 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03004/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 9 EFFN 1.665527 CKSUM 3279985004 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 69.00 NC 38.90 EFP7GF -7.4146 0.71868 ECMLC 0.69546 -8.08002 0.60247 1600000 503023 0.002386 ECMGC 0.40405 -13.76999 -2.96977 1600000 31422 0.012730 ECMLI 0.53414 -8.65956 2.01488 1600000 359238 0.003340 ECMGI 0.43352 -9.41662 0.64485 1600000 31361 0.012755 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 100 122 -6.761 -8.007 -0.087 -4.460 IL 1 1 2 1 4 11 41 101 124 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 12 42 102 124 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 84 - C - - MR 3 2 3 5 3 13 42 100 122 -8.258 -0.020 -6.575 -1.492 1.549 -2.306 -0.957 D 4 2 3 5 3 8 37 98 121 -6.390 -1.568 -0.620 IR 5 5 3 5 3 12 41 101 123 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 83 - g - - MR 6 5 3 8 3 13 41 99 121 -8.258 -0.020 -6.575 0.545 -1.340 0.632 -0.744 D 7 5 3 8 3 8 36 97 120 -6.390 -1.568 -0.620 IR 8 8 3 8 3 11 40 100 122 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 82 - U - - MR 9 8 3 11 3 12 40 98 120 -8.258 -0.020 -6.575 -1.296 -1.326 -2.019 1.559 D 10 8 3 11 3 8 35 96 119 -6.390 -1.568 -0.620 IR 11 11 3 11 3 11 39 99 121 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 81 - u - - MR 12 11 3 14 3 12 39 97 119 -8.258 -0.020 -6.575 -0.320 -0.854 0.156 0.615 D 13 11 3 14 3 7 34 95 118 -6.390 -1.568 -0.620 IR 14 14 3 14 3 10 38 98 120 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 80 - A - - MR 15 14 3 17 3 11 38 96 118 -8.258 -0.020 -6.575 1.670 -2.163 -1.816 -1.685 D 16 14 3 17 3 7 34 94 117 -6.390 -1.568 -0.620 IR 17 17 3 17 3 10 38 97 119 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 79 - G - - MR 18 17 3 20 3 11 37 95 117 -8.258 -0.020 -6.575 -1.358 -2.542 1.667 -1.927 D 19 17 3 20 3 6 33 93 116 -6.390 -1.568 -0.620 IR 20 20 3 20 3 10 37 96 118 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 78 - g - - MR 21 20 3 23 3 10 37 94 116 -8.258 -0.020 -6.575 -0.278 0.032 0.421 -0.298 D 22 20 3 23 3 6 32 92 114 -6.390 -1.568 -0.620 IR 23 23 3 23 3 9 36 95 117 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 77 - A - - MR 24 23 3 26 3 10 36 93 115 -4.338 -0.089 -6.575 1.670 -2.163 -1.816 -1.685 D 25 23 3 26 3 6 32 91 113 -6.390 -1.568 -0.620 IR 26 26 3 26 3 9 35 94 116 -2.116 -0.473 -4.354 0.000 0.000 0.000 0.000 [ MATR 9 ] - 75 - A - - MR 27 26 3 29 3 9 35 92 114 -8.258 -0.020 -6.575 1.670 -2.163 -1.816 -1.685 D 28 26 3 29 3 5 31 90 112 -6.390 -1.568 -0.620 IR 29 29 3 29 3 8 34 93 115 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 74 - u - - MR 30 29 3 32 3 9 34 91 113 -8.258 -0.020 -6.575 0.440 -0.786 -1.015 0.649 D 31 29 3 32 3 5 30 89 111 -6.390 -1.568 -0.620 IR 32 32 3 32 3 8 34 92 114 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 73 - U - - MR 33 32 3 35 3 9 33 90 112 -8.258 -0.020 -6.575 -1.296 -1.326 -2.019 1.559 D 34 32 3 35 3 5 29 88 110 -6.390 -1.568 -0.620 IR 35 35 3 35 3 8 33 91 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 72 - C - - MR 36 35 3 38 3 8 32 89 111 -8.258 -0.020 -6.575 -1.492 1.549 -2.306 -0.957 D 37 35 3 38 3 4 29 87 109 -6.390 -1.568 -0.620 IR 38 38 3 38 3 7 32 90 112 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 71 - G - - MR 39 38 3 41 3 7 31 88 110 -8.258 -0.020 -6.575 -1.358 -2.542 1.667 -1.927 D 40 38 3 41 3 4 28 86 108 -6.390 -1.568 -0.620 IR 41 41 3 41 3 7 31 89 111 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 70 - G - - MR 42 41 3 44 3 7 30 87 109 -8.258 -0.020 -6.575 -1.358 -2.542 1.667 -1.927 D 43 41 3 44 3 4 28 85 107 -6.390 -1.568 -0.620 IR 44 44 3 44 3 6 30 88 110 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 69 - C - - MR 45 44 3 47 3 6 29 86 108 -8.258 -0.020 -6.575 -1.492 1.549 -2.306 -0.957 D 46 44 3 47 3 3 27 84 106 -6.390 -1.568 -0.620 IR 47 47 3 47 3 6 29 87 109 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 68 - A - - MR 48 47 3 50 3 5 28 85 107 -8.258 -0.020 -6.575 1.178 -1.391 -0.323 -0.843 D 49 47 3 50 3 3 27 84 106 -6.390 -1.568 -0.620 IR 50 50 3 50 3 5 29 86 108 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 67 - A - - MR 51 50 3 53 2 4 27 84 106 -8.231 -0.005 1.670 -2.163 -1.816 -1.685 D 52 50 3 53 2 3 26 83 105 -4.432 -0.068 IR 53 53 3 53 2 4 28 85 107 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 18 ] - - - - - - B 54 53 3 55 126 3 26 83 105 [ BEGL 19 ] - - - - - - S 55 54 1 56 4 0 0 38 57 -0.046 -6.778 -6.185 -6.825 [ MATP 20 ] 1 23 G C - - MP 56 55 1 60 6 2 2 38 57 -9.066 -9.005 -0.022 -7.781 -8.061 -8.456 -3.774 -2.610 -3.802 1.446 -4.232 -4.405 0.259 -4.095 -3.729 3.195 -4.147 -0.254 -0.064 -3.807 -1.725 -2.702 ML 57 55 1 60 6 1 1 36 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 58 55 1 60 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 59 55 1 60 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 60 60 5 60 6 1 1 37 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 61 61 6 61 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 2 22 C G - - MP 62 61 6 66 6 2 2 36 55 -9.066 -9.005 -0.022 -7.781 -8.061 -8.456 -3.855 -3.799 -3.664 -0.073 -2.517 -4.163 3.192 -3.267 -3.693 0.186 -4.036 -1.807 1.088 -3.959 0.522 -2.556 ML 63 61 6 66 6 1 1 34 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 64 61 6 66 6 1 1 34 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 65 61 6 66 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 66 66 5 66 6 1 1 35 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 67 67 6 67 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 3 21 c g - - MP 68 67 6 72 6 2 2 34 53 -9.066 -9.005 -0.022 -7.781 -8.061 -8.456 -3.574 -3.490 -3.459 0.233 -2.431 -4.039 2.719 -3.132 -3.474 0.513 -3.867 -1.470 2.161 -3.714 -0.109 -2.349 ML 69 67 6 72 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 70 67 6 72 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 71 67 6 72 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 72 72 5 72 6 1 1 33 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 73 73 6 73 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 4 20 g c - - MP 74 73 6 78 4 2 2 32 51 -6.836 -7.043 -0.058 -5.457 -3.520 -2.490 -3.551 1.880 -3.937 -4.335 0.481 -3.826 -3.535 2.922 -3.984 -0.125 0.163 -3.649 -1.483 -2.457 ML 75 73 6 78 4 1 1 32 52 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 76 73 6 78 4 1 1 32 51 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 77 73 6 78 4 0 0 31 50 -4.568 -4.250 -2.265 -0.520 IL 78 78 5 78 4 1 1 34 53 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 79 79 6 79 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 5 - g - - - ML 80 79 6 82 3 1 1 29 48 -7.860 -0.353 -2.232 -0.227 0.055 0.123 0.025 D 81 79 6 82 3 0 0 28 47 -6.174 -1.687 -0.566 IL 82 82 3 82 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 6 - C - - - ML 83 82 3 85 3 1 1 28 47 -7.535 -0.028 -6.189 -0.781 1.213 -1.550 -0.399 D 84 82 3 85 3 0 0 27 46 -7.627 -0.419 -2.018 IL 85 85 3 85 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 7 - U - - - ML 86 85 3 88 3 1 1 27 46 -7.860 -0.022 -6.514 -1.296 -1.326 -2.019 1.559 D 87 85 3 88 3 0 0 26 45 -6.174 -1.687 -0.566 IL 88 88 3 88 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 8 - C - - - ML 89 88 3 91 3 1 1 26 45 -7.860 -0.022 -6.514 -1.492 1.549 -2.306 -0.957 D 90 88 3 91 3 0 0 25 44 -6.174 -1.687 -0.566 IL 91 91 3 91 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 9 - U - - - ML 92 91 3 94 3 1 1 25 44 -7.860 -0.022 -6.514 -1.296 -1.326 -2.019 1.559 D 93 91 3 94 3 0 0 24 43 -6.174 -1.687 -0.566 IL 94 94 3 94 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 10 - G - - - ML 95 94 3 97 3 1 1 24 42 -7.860 -0.022 -6.514 -1.358 -2.542 1.667 -1.927 D 96 94 3 97 3 0 0 23 42 -6.174 -1.687 -0.566 IL 97 97 3 97 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 11 - a - - - ML 98 97 3 100 3 1 1 22 41 -7.860 -0.022 -6.514 0.461 0.383 -1.076 -0.242 D 99 97 3 100 3 0 0 21 40 -6.174 -1.687 -0.566 IL 100 100 3 100 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 12 - U - - - ML 101 100 3 103 3 1 1 21 40 -7.860 -0.022 -6.514 -1.296 -1.326 -2.019 1.559 D 102 100 3 103 3 0 0 20 39 -6.174 -1.687 -0.566 IL 103 103 3 103 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 13 - A - - - ML 104 103 3 106 3 1 1 20 39 -7.860 -0.022 -6.514 1.670 -2.163 -1.816 -1.685 D 105 103 3 106 3 0 0 19 38 -6.174 -1.687 -0.566 IL 106 106 3 106 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 14 - G - - - ML 107 106 3 109 3 1 1 19 38 -7.860 -0.022 -6.514 -1.358 -2.542 1.667 -1.927 D 108 106 3 109 3 0 0 18 37 -6.174 -1.687 -0.566 IL 109 109 3 109 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 15 - U - - - ML 110 109 3 112 3 1 1 18 36 -7.860 -0.022 -6.514 -1.296 -1.326 -2.019 1.559 D 111 109 3 112 3 0 0 17 36 -6.174 -1.687 -0.566 IL 112 112 3 112 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 16 - C - - - ML 113 112 3 115 3 1 1 16 35 -7.860 -0.022 -6.514 -1.000 1.238 -1.809 -0.223 D 114 112 3 115 3 0 0 16 34 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 17 - U - - - ML 116 115 3 118 3 1 1 15 33 -7.860 -0.022 -6.514 -1.296 -1.326 -2.019 1.559 D 117 115 3 118 3 0 0 15 33 -6.174 -1.687 -0.566 IL 118 118 3 118 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 18 - C - - - ML 119 118 3 121 3 1 1 13 32 -7.860 -0.022 -6.514 -1.492 1.549 -2.306 -0.957 D 120 118 3 121 3 0 0 13 32 -6.174 -1.687 -0.566 IL 121 121 3 121 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 19 - a - - - ML 122 121 3 124 2 1 1 1 1 * 0.000 0.814 -1.296 0.291 -0.711 D 123 121 3 124 2 0 0 0 0 * 0.000 IL 124 124 3 124 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 39 ] - - - - - - E 125 124 3 -1 0 0 0 0 0 [ BEGR 40 ] - - - - - - S 126 54 1 127 3 0 9 60 82 -7.860 -0.022 -6.514 IL 127 127 2 127 3 1 10 62 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 24 - A - - - ML 128 127 2 130 3 1 9 60 82 -7.860 -0.022 -6.514 1.670 -2.163 -1.816 -1.685 D 129 127 2 130 3 0 6 58 80 -6.174 -1.687 -0.566 IL 130 130 3 130 3 1 9 61 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 25 - A - - - ML 131 130 3 133 3 1 8 59 81 -7.860 -0.022 -6.514 1.345 -1.531 -0.699 -1.009 D 132 130 3 133 3 0 5 57 79 -6.174 -1.687 -0.566 IL 133 133 3 133 3 1 8 60 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 26 - C - - - ML 134 133 3 136 3 1 7 58 79 -7.860 -0.022 -6.514 -1.492 1.549 -2.306 -0.957 D 135 133 3 136 3 0 5 56 78 -6.174 -1.687 -0.566 IL 136 136 3 136 3 1 7 59 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 27 - C - - - ML 137 136 3 139 3 1 6 56 78 -7.860 -0.022 -6.514 -1.492 1.549 -2.306 -0.957 D 138 136 3 139 3 0 4 55 77 -6.174 -1.687 -0.566 IL 139 139 3 139 3 1 6 58 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 28 - g - - - ML 140 139 3 142 2 1 5 55 77 -8.231 -0.005 0.579 -1.330 0.592 -0.735 D 141 139 3 142 2 0 4 54 76 -8.445 -0.004 IL 142 142 3 142 2 1 5 56 78 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 46 ] - - - - - - B 143 142 3 144 188 0 4 54 76 [ BEGL 47 ] - - - - - - S 144 143 1 145 4 0 0 32 54 -0.046 -6.778 -6.185 -6.825 [ MATP 48 ] 29 44 c g - - MP 145 144 1 149 6 2 2 32 54 -9.066 -9.005 -0.022 -7.781 -8.061 -8.456 -3.541 -3.458 -3.436 0.255 -2.428 -4.025 2.566 -3.122 -3.452 0.537 -3.850 -1.443 2.342 -3.687 -0.109 -2.330 ML 146 144 1 149 6 1 1 30 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 147 144 1 149 6 1 1 30 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 148 144 1 149 6 0 0 28 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 149 149 5 149 6 1 1 32 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 150 150 6 150 5 1 1 31 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 30 43 G C - - MP 151 150 6 155 6 2 2 30 52 -9.066 -9.005 -0.022 -7.781 -8.061 -8.456 -4.542 -2.999 -4.625 0.331 -4.951 -4.614 -0.365 -4.852 -4.194 3.586 -4.546 -0.692 -0.756 -4.336 -2.392 -3.505 ML 152 150 6 155 6 1 1 28 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 153 150 6 155 6 1 1 28 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 154 150 6 155 6 0 0 26 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 155 155 5 155 6 1 1 30 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 156 156 6 156 5 1 1 29 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 31 42 c g - - MP 157 156 6 161 6 2 2 28 50 -9.066 -9.005 -0.022 -7.781 -8.061 -8.456 -3.567 -3.484 -3.455 0.237 -2.431 -4.036 2.698 -3.130 -3.470 0.517 -3.864 -1.464 2.187 -3.709 -0.109 -2.345 ML 158 156 6 161 6 1 1 26 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 159 156 6 161 6 1 1 26 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 160 156 6 161 6 0 0 24 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 161 161 5 161 6 1 1 28 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 162 162 6 162 5 1 1 27 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 32 41 U A - - MP 163 162 6 167 6 2 2 26 48 -9.066 -9.005 -0.022 -7.781 -8.061 -8.456 -3.977 -3.795 -3.839 -0.106 -2.828 -4.422 1.495 -3.508 -3.846 0.182 -4.230 -1.701 3.216 -4.136 -0.509 -2.690 ML 164 162 6 167 6 1 1 25 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 165 162 6 167 6 1 1 24 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 166 162 6 167 6 0 0 22 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 167 167 5 167 6 1 1 26 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 168 168 6 168 5 1 1 25 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 33 40 G C - - MP 169 168 6 173 4 2 2 24 46 -6.836 -2.089 -0.447 -5.457 -4.542 -2.999 -4.625 0.331 -4.951 -4.614 -0.365 -4.852 -4.194 3.586 -4.546 -0.692 -0.756 -4.336 -2.392 -3.505 ML 170 168 6 173 4 1 1 23 45 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 171 168 6 173 4 1 1 22 44 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 172 168 6 173 4 0 0 21 43 -4.568 -4.250 -2.265 -0.520 IL 173 173 5 173 4 1 1 24 46 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 174 174 6 174 3 1 1 24 46 -1.215 -0.890 -5.073 0.000 0.000 0.000 0.000 [ MATL 53 ] 34 - u - - - ML 175 174 6 177 3 1 1 16 35 -7.860 -0.022 -6.514 0.429 -0.785 -1.017 0.659 D 176 174 6 177 3 0 0 16 34 -6.174 -1.687 -0.566 IL 177 177 3 177 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 35 - A - - - ML 178 177 3 180 3 1 1 15 33 -7.860 -0.022 -6.514 1.301 -1.297 -1.248 -0.498 D 179 177 3 180 3 0 0 15 33 -6.174 -1.687 -0.566 IL 180 180 3 180 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 36 - A - - - ML 181 180 3 183 3 1 1 13 32 -7.860 -0.022 -6.514 1.670 -2.163 -1.816 -1.685 D 182 180 3 183 3 0 0 13 32 -6.174 -1.687 -0.566 IL 183 183 3 183 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 37 - U - - - ML 184 183 3 186 2 1 1 1 1 * 0.000 -1.296 -1.326 -2.019 1.559 D 185 183 3 186 2 0 0 0 0 * 0.000 IL 186 186 3 186 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 57 ] - - - - - - E 187 186 3 -1 0 0 0 0 0 [ BEGR 58 ] - - - - - - S 188 143 1 189 3 0 0 37 56 -7.860 -0.022 -6.514 IL 189 189 2 189 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 45 - g - - - ML 190 189 2 192 3 1 1 37 56 -7.860 -0.022 -6.514 0.579 -1.330 0.592 -0.735 D 191 189 2 192 3 0 0 35 55 -6.174 -1.687 -0.566 IL 192 192 3 192 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 46 - A - - - ML 193 192 3 195 3 1 1 35 55 -7.860 -0.022 -6.514 1.670 -2.163 -1.816 -1.685 D 194 192 3 195 3 0 0 34 53 -6.174 -1.687 -0.566 IL 195 195 3 195 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 47 - A - - - ML 196 195 3 198 5 1 1 34 53 -7.003 -0.042 -6.819 -7.031 -7.922 1.670 -2.163 -1.816 -1.685 D 197 195 3 198 5 0 0 33 52 -4.959 -0.803 -4.221 -2.596 -2.508 IL 198 198 3 198 5 1 1 35 54 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 62 ] 48 66 G C - - MP 199 198 3 203 6 2 2 33 52 -9.066 -9.005 -0.022 -7.781 -8.061 -8.456 -4.542 -2.999 -4.625 0.331 -4.951 -4.614 -0.365 -4.852 -4.194 3.586 -4.546 -0.692 -0.756 -4.336 -2.392 -3.505 ML 200 198 3 203 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 201 198 3 203 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 202 198 3 203 6 0 0 29 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 203 203 5 203 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 204 204 6 204 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 63 ] 49 65 A U - - MP 205 204 6 209 6 2 2 31 50 -9.066 -9.005 -0.022 -7.781 -8.061 -8.456 -3.624 -2.700 -3.654 3.211 -3.910 -4.958 0.379 -3.706 -3.554 1.259 -4.093 -0.205 -0.039 -4.173 -1.563 -2.499 ML 206 204 6 209 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 207 204 6 209 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 208 204 6 209 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 209 209 5 209 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 210 210 6 210 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 64 ] 50 64 g c - - MP 211 210 6 215 6 2 2 29 48 -9.066 -9.005 -0.022 -7.781 -8.061 -8.456 -3.502 -2.482 -3.535 1.915 -3.916 -4.332 0.495 -3.807 -3.521 2.897 -3.973 -0.116 0.177 -3.641 -1.468 -2.441 ML 212 210 6 215 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 213 210 6 215 6 1 1 28 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 214 210 6 215 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 215 215 5 215 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 216 216 6 216 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 65 ] 51 63 g c - - MP 217 216 6 221 4 2 2 27 46 -6.836 -7.043 -0.058 -5.457 -3.187 -2.706 -3.210 0.896 -2.822 -3.958 1.518 -3.242 -3.250 2.270 -3.713 -0.534 1.948 -3.335 -0.487 -2.146 ML 218 216 6 221 4 1 1 28 47 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 219 216 6 221 4 1 1 27 47 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 220 216 6 221 4 0 0 26 46 -4.568 -4.250 -2.265 -0.520 IL 221 221 5 221 4 1 1 29 49 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 222 222 6 222 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 52 - a - - - ML 223 222 6 225 3 1 1 25 44 -7.860 -0.022 -6.514 0.619 -0.267 -0.942 0.154 D 224 222 6 225 3 0 0 24 43 -6.174 -1.687 -0.566 IL 225 225 3 225 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 53 - u - - - ML 226 225 3 228 3 1 1 23 42 -7.860 -0.353 -2.232 -0.625 0.306 -1.386 0.793 D 227 225 3 228 3 0 0 23 42 -6.174 -1.687 -0.566 IL 228 228 3 228 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 54 - c - - - ML 229 228 3 231 3 1 1 22 41 -7.535 -0.028 -6.189 -0.466 0.744 -1.221 0.229 D 230 228 3 231 3 0 0 21 40 -7.627 -0.419 -2.018 IL 231 231 3 231 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 55 - G - - - ML 232 231 3 234 3 1 1 21 40 -7.860 -0.022 -6.514 -1.358 -2.542 1.667 -1.927 D 233 231 3 234 3 0 0 20 39 -6.174 -1.687 -0.566 IL 234 234 3 234 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 56 - u - - - ML 235 234 3 237 3 1 1 20 39 -7.860 -0.022 -6.514 -0.625 0.307 -1.386 0.792 D 236 234 3 237 3 0 0 19 38 -6.174 -1.687 -0.566 IL 237 237 3 237 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 57 - A - - - ML 238 237 3 240 3 1 1 19 38 -7.860 -0.022 -6.514 1.670 -2.163 -1.816 -1.685 D 239 237 3 240 3 0 0 18 37 -6.174 -1.687 -0.566 IL 240 240 3 240 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 58 - a - - - ML 241 240 3 243 3 1 1 18 36 -7.860 -0.022 -6.514 0.701 0.094 -1.031 -0.290 D 242 240 3 243 3 0 0 17 36 -6.174 -1.687 -0.566 IL 243 243 3 243 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 73 ] 59 - U - - - ML 244 243 3 246 3 1 1 16 35 -7.860 -0.022 -6.514 -1.296 -1.326 -2.019 1.559 D 245 243 3 246 3 0 0 16 34 -6.174 -1.687 -0.566 IL 246 246 3 246 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 74 ] 60 - C - - - ML 247 246 3 249 3 1 1 15 33 -7.860 -0.022 -6.514 -1.013 1.249 -1.821 -0.243 D 248 246 3 249 3 0 0 15 33 -6.174 -1.687 -0.566 IL 249 249 3 249 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 75 ] 61 - u - - - ML 250 249 3 252 3 1 1 13 32 -7.860 -0.022 -6.514 0.429 -0.785 -1.017 0.659 D 251 249 3 252 3 0 0 13 32 -6.174 -1.687 -0.566 IL 252 252 3 252 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 76 ] 62 - A - - - ML 253 252 3 255 2 1 1 1 1 * 0.000 1.301 -1.297 -1.248 -0.498 D 254 252 3 255 2 0 0 0 0 * 0.000 IL 255 255 3 255 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 77 ] - - - - - - E 256 255 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME Lacto-phage-1 ACC RF03004 DESC Lacto-phage-1 RNA LENG 81 MAXL 170 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Tue Jul 16 19:23:04 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF03004/CM NSEQ 9 EFFN 2.245605 CKSUM 3279985004 STATS LOCAL MSV -8.9115 0.71868 STATS LOCAL VITERBI -9.4383 0.71868 STATS LOCAL FORWARD -3.4171 0.71868 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.29104 1.39428 1.45176 1.41532 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 0.00000 * 1 1.65046 2.65140 0.41764 2.53974 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 2 2.76353 0.45906 2.52360 1.49218 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 3 2.52092 0.79600 2.26294 1.00940 3 c - - < 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 4 1.32201 2.47894 0.58816 2.36215 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 5 1.61213 1.31218 1.24859 1.40896 5 g - - _ 1.38629 1.38629 1.38629 1.38629 0.33346 3.93963 1.33142 1.46634 0.26236 1.09861 0.40547 6 2.15985 0.41564 2.70988 1.84391 6 C - - _ 1.38629 1.38629 1.38629 1.38629 0.05289 3.65906 3.65906 1.46634 0.26236 0.13744 2.05250 7 2.56631 2.53774 3.08190 0.22531 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 8 2.78972 0.21315 3.36516 2.34369 8 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 9 2.56631 2.53774 3.08190 0.22531 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 10 2.65213 3.52328 0.15678 3.09880 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 11 1.04713 1.05590 2.23828 1.63714 11 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 12 2.56631 2.53774 3.08190 0.22531 12 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 13 0.16300 3.19263 2.92130 2.89170 13 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 14 2.65213 3.52328 0.15678 3.09880 14 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 15 2.56631 2.53774 3.08190 0.22531 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 16 2.30102 0.42932 2.88021 1.64626 16 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 17 2.56631 2.53774 3.08190 0.22531 17 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 18 2.78972 0.21315 3.36516 2.34369 18 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 19 0.78031 2.41682 1.14111 2.01689 19 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 20 2.59559 0.67238 2.29224 1.15878 20 C - - > 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 21 1.14691 2.42738 0.70920 2.28204 21 g - - > 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 22 1.98192 2.68085 0.33828 2.51711 22 G - - > 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 23 2.75720 0.48305 2.46107 1.45121 23 C - - > 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 24 0.16300 3.19263 2.92130 2.89170 24 A - - , 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 25 0.39021 2.61415 1.92030 2.27022 25 A - - , 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 26 2.78972 0.21315 3.36516 2.34369 26 C - - , 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 27 2.78972 0.21315 3.36516 2.34369 27 C - - , 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 28 0.96182 2.44439 0.91457 2.03765 28 g - - , 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 29 2.51016 0.91113 2.24945 0.88863 29 u - - < 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 30 2.55886 3.19622 0.17635 3.13802 30 G - - < 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 31 2.51749 0.81132 2.25950 0.99247 31 c - - < 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 32 2.91891 1.86459 2.66258 0.32673 32 U - - < 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 33 2.55533 3.19212 0.17718 3.13228 33 G - - < 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 34 1.07306 2.00436 2.17181 0.89325 34 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 35 0.42042 2.41389 2.39264 1.81786 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 36 0.16300 3.19263 2.92130 2.89170 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 37 2.56631 2.53774 3.08190 0.22531 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.34718 1.29511 3.93963 0.74306 0.64561 1.09861 0.40547 38 3.33430 0.20966 3.02469 2.25446 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 39 0.37128 2.84425 1.70135 2.66594 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 40 1.12759 2.42398 0.72317 2.27879 42 g - - > 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 41 3.32708 0.21035 3.02154 2.25308 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 42 1.01050 2.41031 0.81561 2.26520 44 g - - > 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 43 0.96182 2.44439 0.91457 2.03765 45 g - - , 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 44 0.16300 3.19263 2.92130 2.89170 46 A - - , 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 45 0.16300 3.19263 2.92130 2.89170 47 A - - , 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 46 2.55874 3.19609 0.17638 3.13783 48 G - - < 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 47 0.36136 2.71713 1.79167 2.65175 49 A - - < 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 48 1.29617 2.46913 0.60401 2.35233 50 G - - < 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 49 2.02308 1.68883 1.01388 1.13879 51 g - - < 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 50 0.92425 1.56537 2.10895 1.29903 52 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 51 1.94171 1.12532 2.48366 0.80172 53 u - - _ 1.38629 1.38629 1.38629 1.38629 0.33346 3.93963 1.33142 1.46634 0.26236 1.09861 0.40547 52 1.81812 0.78130 2.35609 1.25502 54 c - - _ 1.38629 1.38629 1.38629 1.38629 0.05289 3.65906 3.65906 1.46634 0.26236 0.13744 2.05250 53 2.65213 3.52328 0.15678 3.09880 55 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 54 1.94169 1.12495 2.48366 0.80199 56 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 55 0.16300 3.19263 2.92130 2.89170 57 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 56 0.85841 1.27905 2.20165 1.67536 58 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 57 2.56631 2.53774 3.08190 0.22531 59 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 58 2.31301 0.42126 2.89228 1.66406 60 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 59 1.07306 2.00436 2.17181 0.89325 61 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 60 0.42042 2.41389 2.39264 1.81786 62 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 61 1.26745 1.10800 1.52020 1.77452 63 c - - > 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 62 2.58738 0.69009 2.28269 1.13556 64 C - - > 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 63 2.87814 2.08020 2.52833 0.30237 65 U - - > 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 64 3.33723 0.20939 3.02597 2.25502 66 C - - > 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 65 0.16300 3.19263 2.92130 2.89170 67 A - - : 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 66 0.51108 2.49678 1.61552 2.12849 68 A - - : 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 67 2.78972 0.21315 3.36516 2.34369 69 C - - : 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 68 2.65213 3.52328 0.15678 3.09880 70 G - - : 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 69 2.65213 3.52328 0.15678 3.09880 71 G - - : 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 70 2.78972 0.21315 3.36516 2.34369 72 C - - : 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 71 2.56631 2.53774 3.08190 0.22531 73 U - - : 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 72 1.06500 2.00472 2.17003 0.90042 74 u - - : 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 73 0.16300 3.19263 2.92130 2.89170 75 A - - : 1.38629 1.38629 1.38629 1.38629 0.10431 2.53074 3.93963 0.43295 1.04581 1.09861 0.40547 74 0.16300 3.19263 2.92130 2.89170 77 A - - : 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 75 1.67286 1.32718 1.01429 1.69061 78 g - - : 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 76 2.65213 3.52328 0.15678 3.09880 79 G - - : 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 77 0.16300 3.19263 2.92130 2.89170 80 A - - : 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 78 1.68581 2.06036 1.23812 0.92289 81 u - - : 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 79 2.56631 2.53774 3.08190 0.22531 82 U - - : 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 80 0.98897 2.45219 0.88537 2.04504 83 g - - : 1.38629 1.38629 1.38629 1.38629 0.03969 3.93963 3.93963 1.46634 0.26236 1.09861 0.40547 81 2.78972 0.21315 3.36516 2.34369 84 C - - : 1.38629 1.38629 1.38629 1.38629 0.02004 3.91998 * 1.46634 0.26236 0.00000 * //