INFERNAL1/a [1.1.5 | Sep 2023] NAME THF-II ACC RF02977 DESC THF-II riboswitch (folE RNA) STATES 121 NODES 30 CLEN 39 W 121 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 28 14:18:59 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/3DNew/RF02977/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 46 EFFN 11.570190 CKSUM 3960074585 NULL 0.000 0.000 0.000 0.000 GA 41.00 TC 41.60 NC 32.40 EFP7GF -20.2535 0.71960 ECMLC 0.60481 -7.84752 3.18905 1600000 950826 0.001262 ECMGC 0.45897 -20.08097 -4.93930 1600000 417083 0.000959 ECMLI 0.59460 -7.54624 3.53570 1600000 872742 0.001375 ECMGI 0.46397 -17.62878 -3.51094 1600000 279760 0.001430 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 121 235 -8.678 -9.923 -0.023 -6.377 IL 1 1 2 1 4 1 2 123 236 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 3 123 236 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 63 - G - - MR 3 2 3 5 3 1 5 122 235 -10.110 -0.006 -8.428 -4.484 -6.053 1.968 -5.217 D 4 2 3 5 3 0 0 119 233 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 2 122 235 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 62 - A - - MR 6 5 3 8 3 1 5 121 234 -10.110 -0.006 -8.428 1.971 -5.556 -4.983 -5.232 D 7 5 3 8 3 0 0 118 232 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 2 121 234 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 61 - G - - MR 9 8 3 11 5 1 4 120 233 -8.780 -0.012 -8.595 -8.807 -9.699 -4.484 -6.053 1.968 -5.217 D 10 8 3 11 5 0 0 117 231 -5.352 -0.707 -2.978 -4.409 -2.404 IR 11 11 3 11 5 1 1 120 233 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 9 60 C G - - MP 12 11 3 16 6 2 5 119 232 -10.139 -10.079 -0.010 -8.855 -9.135 -9.530 -8.251 -8.438 -7.123 -4.707 -5.455 -7.048 3.964 -6.917 -7.728 -4.687 -7.090 -6.714 -2.731 -8.144 -3.717 -6.531 ML 13 11 3 16 6 1 1 116 230 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 3 16 6 1 1 116 230 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 3 16 6 0 0 112 226 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 1 118 231 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 1 118 231 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 10 59 C G - - MP 18 17 6 22 6 2 4 117 230 -10.139 -10.079 -0.010 -8.855 -9.135 -9.530 -6.626 -6.815 -5.984 -3.032 -4.365 -6.160 3.405 2.085 -6.072 -3.007 -6.212 -5.056 -1.069 -6.497 -2.063 -4.876 ML 19 17 6 22 6 1 1 115 228 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 1 114 228 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 0 111 224 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 1 116 229 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 1 116 229 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 11 58 G C - - MP 24 23 6 28 6 2 4 115 228 -10.139 -10.079 -0.010 -8.855 -9.135 -9.530 -7.734 -4.684 -9.030 -2.029 -9.176 -5.928 -3.778 -8.896 -6.037 3.938 -6.256 -2.567 -4.144 -6.335 -6.114 -7.884 ML 25 23 6 28 6 1 1 113 227 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 1 112 226 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 0 110 223 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 1 114 227 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 1 114 227 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 12 57 U A - - MP 30 29 6 34 4 2 2 113 226 -8.850 -4.097 -0.099 -7.471 -8.861 -8.755 -8.312 -5.117 -6.764 -8.546 -2.560 -7.647 -8.157 -5.185 -8.537 -6.770 3.968 -8.584 -4.099 -5.331 ML 31 29 6 34 4 1 1 112 225 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 4 1 1 110 224 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 33 29 6 34 4 0 0 109 223 -4.568 -4.250 -2.265 -0.520 IL 34 34 5 34 4 1 1 112 226 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 35 35 6 35 3 1 1 112 225 -1.984 -0.498 -4.684 0.000 0.000 0.000 0.000 [ MATL 8 ] 13 - U - - - ML 36 35 6 38 3 1 2 111 224 -9.789 -0.006 -8.443 -4.601 -4.194 -5.412 1.956 D 37 35 6 38 3 0 0 108 222 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 1 111 225 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 14 - C - - - ML 39 38 3 41 3 1 1 110 223 -9.789 -0.006 -8.443 -2.781 1.227 -3.801 0.528 D 40 38 3 41 3 0 0 107 221 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 1 110 224 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 15 - A - - - ML 42 41 3 44 3 1 1 109 222 -5.893 -0.029 -8.443 1.971 -5.556 -4.983 -5.232 D 43 41 3 44 3 0 0 106 220 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 1 109 223 -1.617 -0.681 -4.317 0.000 0.000 0.000 0.000 [ MATL 11 ] 17 - A - - - ML 45 44 3 47 3 1 1 108 221 -9.789 -0.006 -8.443 1.971 -5.556 -4.983 -5.232 D 46 44 3 47 3 0 0 105 219 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 1 108 222 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 18 - C - - - ML 48 47 3 50 3 1 1 107 220 -9.789 -0.006 -8.443 -5.069 1.961 -5.587 -4.161 D 49 47 3 50 3 0 0 104 218 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 1 107 221 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 19 - U - - - ML 51 50 3 53 3 1 1 106 219 -9.789 -0.006 -8.443 -4.601 -4.194 -5.412 1.956 D 52 50 3 53 3 0 0 104 217 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 1 106 220 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 20 - C - - - ML 54 53 3 56 3 1 1 105 218 -10.110 -0.006 -8.428 -4.271 1.879 -4.930 -2.078 D 55 53 3 56 3 0 0 103 216 -5.620 -0.734 -1.403 IL 56 56 3 56 3 1 1 105 218 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 55 - U - - MR 57 56 3 59 5 1 1 104 217 -8.780 -0.012 -8.595 -8.807 -9.699 -3.045 -2.918 -2.532 1.837 D 58 56 3 59 5 0 0 101 215 -5.352 -0.707 -2.978 -4.409 -2.404 IR 59 59 3 59 5 1 1 104 217 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 21 54 G C - - MP 60 59 3 64 6 2 2 103 216 -10.139 -10.079 -0.010 -8.855 -9.135 -9.530 -7.734 -4.684 -9.030 -2.029 -9.176 -5.928 -3.778 -8.896 -6.037 3.938 -6.256 -2.567 -4.144 -6.335 -6.114 -7.884 ML 61 59 3 64 6 1 1 100 214 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 3 64 6 1 1 100 213 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 3 64 6 0 0 95 209 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 1 102 215 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 1 102 215 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 22 53 U A - - MP 66 65 6 70 6 2 2 101 214 -10.139 -10.079 -0.010 -8.855 -9.135 -9.530 -6.275 -6.360 -5.784 -2.446 -4.249 -6.060 1.682 -5.115 -5.833 -2.323 -6.045 -4.392 3.447 -6.218 0.299 -4.622 ML 67 65 6 70 6 1 1 98 212 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 98 211 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 93 207 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 1 100 213 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 1 100 213 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 23 52 u a - - MP 72 71 6 76 6 2 2 99 212 -10.139 -10.079 -0.010 -8.855 -9.135 -9.530 -5.987 -5.970 -5.610 -1.983 -4.153 -5.982 2.809 -4.982 -5.621 -1.822 -5.894 -3.854 2.859 -5.990 -0.191 -4.399 ML 73 71 6 76 6 1 1 96 210 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 1 1 96 209 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 0 91 205 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 1 98 211 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 98 211 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 24 51 c g - - MP 78 77 6 82 6 2 2 97 210 -10.139 -10.079 -0.010 -8.855 -9.135 -9.530 -5.129 -4.924 -5.017 -0.843 -3.800 -5.678 2.940 -4.514 -4.937 0.774 -5.368 -2.601 2.354 -5.266 -1.344 -3.695 ML 79 77 6 82 6 1 1 94 208 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 94 207 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 90 204 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 96 209 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 96 209 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 25 50 C G - - MP 84 83 6 88 6 2 2 95 208 -10.139 -10.079 -0.010 -8.855 -9.135 -9.530 -6.603 -6.805 -5.972 -2.985 -4.353 -6.151 3.788 -5.258 -6.061 -2.926 -6.202 -5.046 0.541 -6.472 -2.049 -4.859 ML 85 83 6 88 6 1 1 93 206 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 92 205 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 89 202 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 94 207 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 94 207 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 26 49 c g - - MP 90 89 6 94 6 2 2 93 206 -10.139 -10.079 -0.075 -8.855 -9.135 -4.480 -5.000 -4.822 -4.915 -0.037 -3.747 -5.596 2.732 -4.449 -4.839 -0.567 -5.283 -2.532 2.389 -5.152 0.914 -3.613 ML 91 89 6 94 6 1 1 91 204 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 1 89 203 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 88 201 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 92 205 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 92 205 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 27 48 u a - - MP 96 95 6 100 4 2 2 91 204 -8.757 -4.719 -0.115 -4.794 -4.825 -4.606 -4.764 -0.556 -3.638 -5.481 2.505 -4.320 -4.682 1.399 -5.141 -2.293 2.561 -4.985 -1.178 -3.451 ML 97 95 6 100 4 1 1 89 203 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 4 1 1 86 199 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 99 95 6 100 4 0 0 87 201 -5.835 -5.516 -0.576 -1.787 IL 100 100 5 100 4 1 1 91 204 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 101 101 6 101 3 1 1 90 204 -1.789 -0.586 -4.489 0.000 0.000 0.000 0.000 [ MATL 23 ] 28 - C - - - ML 102 101 6 104 3 1 1 89 203 -3.946 -0.227 -3.628 -5.023 1.960 -5.546 -4.113 D 103 101 6 104 3 0 0 74 188 -7.103 -2.616 -0.270 IL 104 104 3 104 3 1 1 105 218 -0.234 -2.813 -7.073 0.000 0.000 0.000 0.000 [ MATL 24 ] 42 - c - - - ML 105 104 3 107 3 1 1 16 35 -9.631 -0.006 -8.286 -0.497 0.670 -1.289 0.369 D 106 104 3 107 3 0 0 16 34 -8.307 -0.247 -2.699 IL 107 107 3 107 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 43 - u - - - ML 108 107 3 110 3 1 1 15 33 -9.789 -0.006 -8.443 -0.869 -0.434 -0.056 0.808 D 109 107 3 110 3 0 0 16 34 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 44 - u - - - ML 111 110 3 113 3 1 1 13 32 -9.789 -0.006 -8.443 -0.444 0.031 -1.361 0.891 D 112 110 3 113 3 0 0 15 33 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 45 - G - - - ML 114 113 3 116 3 1 1 12 30 -9.789 -0.006 -8.443 -2.789 -5.320 1.922 -4.659 D 115 113 3 116 3 0 0 13 32 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 46 - A - - - ML 117 116 3 119 2 1 1 1 1 * 0.000 1.834 -1.983 -3.585 -3.337 D 118 116 3 119 2 0 0 0 0 * 0.000 IL 119 119 3 119 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 29 ] - - - - - - E 120 119 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME THF-II ACC RF02977 DESC THF-II riboswitch (folE RNA) LENG 39 MAXL 206 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 28 14:18:59 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/3DNew/RF02977/CM NSEQ 46 EFFN 36.406372 CKSUM 3960074585 STATS LOCAL MSV -6.5256 0.71960 STATS LOCAL VITERBI -7.0927 0.71960 STATS LOCAL FORWARD -4.1257 0.71960 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.58047 1.21819 1.30696 1.47965 1.38629 1.38629 1.38629 1.38629 0.03603 3.41728 5.95629 2.05677 0.13681 0.00000 * 1 6.80987 0.00502 6.81010 5.87606 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 2 5.59653 0.02475 5.52209 4.09025 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 3 4.84797 5.94994 0.01309 5.97181 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 4 6.98073 6.44005 7.15854 0.00331 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 5 6.28420 5.81553 6.93683 0.00583 13 U - - - 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 6 4.77355 0.48361 5.52375 0.99153 14 C - - - 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 7 0.00595 6.53043 6.05002 6.15712 15 A - - - 1.38629 1.38629 1.38629 1.38629 0.02263 3.92295 5.95629 0.24393 1.53035 1.09861 0.40547 8 0.00595 6.53043 6.05002 6.15712 17 A - - - 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 9 6.03385 0.00872 6.34799 5.39541 18 C - - - 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 10 6.28420 5.81553 6.93683 0.00583 19 U - - - 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 11 5.53680 0.06032 5.85725 2.96148 20 C - - - 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 12 4.87595 6.00103 0.01255 6.04571 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 13 5.58360 1.74727 5.49747 0.20102 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 14 5.48259 0.80031 5.38222 0.61239 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 15 4.73284 0.63132 2.29968 1.02439 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 16 5.57369 0.09678 5.51294 2.47200 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 17 3.13801 0.80464 4.32265 0.70094 26 u - - < 1.38629 1.38629 1.38629 1.38629 0.07473 5.95629 2.66762 1.46634 0.26236 1.09861 0.40547 18 4.43530 0.99201 1.72389 0.82338 27 u - - < 1.38629 1.38629 1.38629 1.38629 0.03866 5.88713 3.34811 1.46634 0.26236 0.07195 2.66748 19 5.99931 0.00902 6.31296 5.36281 28 C - - _ 1.38629 1.38629 1.38629 1.38629 0.17538 2.62252 2.42771 2.54991 0.08131 2.68561 0.07061 20 1.92150 0.80781 2.47435 1.12837 42 c - - _ 1.38629 1.38629 1.38629 1.38629 0.00586 5.83616 5.83616 1.46634 0.26236 0.04376 3.15088 21 2.49667 1.71504 1.33060 0.74788 43 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 22 1.85596 1.32612 2.57127 0.68965 44 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 23 3.46582 6.43163 0.03641 5.84406 45 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 24 0.08098 2.76872 5.01052 4.78194 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.11449 3.25037 2.66762 0.12865 2.11433 1.09861 0.40547 25 0.84046 1.73751 0.97440 4.19219 48 a - - > 1.38629 1.38629 1.38629 1.38629 0.00557 5.88713 5.88713 1.46634 0.26236 0.07195 2.66748 26 1.00965 4.49471 0.54774 3.07414 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 27 2.52652 5.64582 0.09235 5.35103 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 28 1.04184 2.31699 0.62098 4.49138 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 29 0.70428 5.52518 0.70053 5.25401 52 g - - > 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 30 0.29439 5.63827 1.39949 5.35304 53 A - - > 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 31 6.12536 0.01570 5.94474 4.53067 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 32 4.50084 4.38962 3.22332 0.06542 55 U - - - 1.38629 1.38629 1.38629 1.38629 0.06814 2.76018 5.95629 0.07992 2.56639 1.09861 0.40547 33 0.00576 7.33673 5.83769 6.13004 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 34 6.01763 0.01633 5.88259 4.51240 58 C - - > 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 35 4.40638 5.66974 0.37147 1.22203 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 36 5.92614 6.97586 0.00453 6.99397 60 G - - > 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 37 5.52690 6.73616 0.00755 6.05121 61 G - - : 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 38 0.00595 6.53043 6.05002 6.15712 62 A - - : 1.38629 1.38629 1.38629 1.38629 0.00519 5.95629 5.95629 1.46634 0.26236 1.09861 0.40547 39 5.52690 6.73616 0.00755 6.05121 63 G - - : 1.38629 1.38629 1.38629 1.38629 0.03344 3.41469 * 1.60290 0.22479 0.00000 * //