# STOCKHOLM 1.0
#=GF ID DUF3800-XI
#=GF AC RF02975
#=GF DE DUF3800-XI RNA
#=GF AU Weinberg Z; 0000-0002-6681-3624
#=GF GA 37.8
#=GF NC 37.4
#=GF TC 38.4
#=GF SE Weinberg Z
#=GF SS Published; PMID:28977401;
#=GF TP Gene; sRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 23.17 -Z 2958934 CM SEQDB
#=GF DR SO; 0000370; small_regulatory_ncRNA;
#=GF RN [1]
#=GF RM 28977401
#=GF RT Detection of 224 candidate structured RNAs by comparative analysis of
#=GF RT specific subsets of intergenic regions.
#=GF RA Weinberg Z, Lunse CE, Corbino KA, Ames TD, Nelson JW, Roth A, Perkins KR,
#=GF RA Sherlock ME, Breaker RR
#=GF RL Nucleic Acids Res. 2017;45:10811-10823.
#=GF CC Actinobacteria, Firmicutes, Proteobacteria, Spirochaetes (1 example).
#=GF CC Nearby to DUF3800
#=GF WK DUF3800_RNA_motifs
#=GF SQ 256

URS0000D692DD_1245473/1-53 UG-G-UCUGGUUGGAA---AACCAG-GGACCAC-CCCAG-GUGUGGGC-GGGGAACCUGCCC
URS0000D69CF6_657308/1-49  CG-G-GCUGGUCGAAA---GAUCCG-GGCCCGA-CAGGAA-----GGC-GGAGGCUCUCUCC
URS0000D6C4F8_12908/1-49   UG-G-GCUGGUCAUAAU--GGUCCCAGGUCCAU-CUAG-------GGU-GGGGAUAGUGCCC
URS0000D6AC68_12908/1-48   CG-G-GCUGGCCGCAA---GGCCCU-GGUCCAC-UGGGA------GCC-GGGGGAGCCCCCG
URS0000D683C6_12908/1-48   UG-A-GCUGGCCGCAA---GGCCCU-GGUUCAU-CUACU------GGC-GAGGUCUUCCUCG
URS0000D68948_12908/1-50   UG-A-GCUGGUCGCAA---GACCCA-GGUUCAA-CCUAAC---A-GGC-GUGGGAGACUCCC
URS0000D6B5A1_12908/1-46   CG-G-GCUGGCCGUGA---GGUCU--GGUUCAC-CAAC-------AGC-GGGGAAAUUCCCC
URS0000D6AD99_1262915/1-47 UG-G-CUUGGGUGAAA---ACUCUG-GGGCCAC-CGUA-------GAC-GGGGACAUUUCCC
URS0000D6AD99_12908/1-47   UG-G-CUUGGGUGAAA---ACUCUG-GGGCCAC-CGUA-------GAC-GGGGACAUUUCCC
URS0000D6C148_12908/1-47   UG-G-CUUGGUCGAAA---GAUCUU-GGGCCGC-CGUA-------GAC-GGGGACAUCUCUC
URS0000D67744_12908/1-47   GG-G-ACUGGUCGAAA---GACCCG-GGUCCUA-CCAC-------GGC-GGGGAGUUACUCC
URS0000D6CB8E_12908/1-47   GG-G-GCUGGUCGUAA---GACCCG-GGUCCUA-CCAA-------GGC-GAGGAGUUACCUC
URS0000D65C94_12908/1-47   GG-G-GCUGGCCGCAA---GGAUCG-GGUCCUA-CCAC-------GGC-GAGGAAAUACCUC
URS0000D6B2FB_12908/1-47   GG-G-GCUGGCCGCAA---GGAUCG-GGUCCUA-CCAC-------GGC-GAGGAAUUACCUC
URS0000D6CE96_12908/1-47   GG-G-GCUGGCCGAAA---GGAUCG-GGUCCCA-CCAC-------GGC-GGGGAGUUACCCC
URS0000D6680E_12908/1-47   GG-G-GCUGGCCGAAA---GGAUCA-GGUCCCA-CCAC-------AGC-GGGGAGUUACCCC
URS0000D67159_12908/1-50   GG-G-GCUGGCCGCAA---GGCCCU-GGUCCCA-CUAAAA-----GGCUGGGGAUGGUGCCC
URS0000D65EAD_12908/1-47   GG-G-GCUGACCGAAA---GGUCCG-GGUCCUA-CCAA-------GGC-GGGGAUGUUCCCC
URS0000D6B0E6_12908/1-47   GG-G-GCUGACCGAAA---GGUCCG-GGUCCUA-CCAA-------GGC-GGGGAUGCUCCCC
URS0000D67956_12908/1-47   AG-G-GCUGACCGAAA---GGUUCG-GGUCCUA-CUAC-------GGC-GGGGAAGUUACCC
URS0000D67BE8_12908/1-47   GG-G-GCUGACCGAAA---GGUCCG-GGUCCUA-CCAC-------GGC-GGGGAAGUUACCC
URS0000D69F38_12908/1-49   UG-G-GCUGAACGAGA---GUUCCA-GGUCCAC-CAAAGC-----GGC-GGGGAGACUCCUC
URS0000D6CB29_12908/1-49   AG-G-GCUGGUCGCAA---GACCCG-GGUCCAA-CGAUAC-----GGU-GUGGGUGUCCCAC
URS0000D69A6D_12908/1-49   CG-G-ACUGGUCGAAA---GACCCG-GGUCCAA-CGAAAA-----GGU-GUGGGUGUCCCAC
URS0000D6B892_12908/1-47   AG-G-GCUGGUCGAAA---GACCCU-GGUCCUU-CACA-------GGC-GGGAUUGUGUCCC
URS0000D6B892_762966/1-47  AG-G-GCUGGUCGAAA---GACCCU-GGUCCUU-CACA-------GGC-GGGAUUGUGUCCC
URS0000D67133_12908/1-47   AG-G-GCUGGUCGUGA---GACCCU-GGUCCUU-CACA-------GGC-GGGAUUGUGUCCC
URS0000D6AED2_1263099/1-47 AG-G-GCUGGUCGAGA---GACCCU-GGUCCUU-CACA-------GGC-GGGGGUGGGGUCC
URS0000D67BC2_12908/1-48   UG-U-GCUGACCGAAA---GGUCCU-GGUCCAC-CAAAU------GGC-GGGGAUAACAACC
URS0000D67770_12908/1-49   UG-G-GCUGGCCGUAG---GGCCCG-GGUCCAA-CCAACU-----GGC-GGGCAUACAGCCC
URS0000D68759_12908/1-48   UG-G-GCUGGCCACGA---GGCCCU-GGUUCAC-CCACU------GGC-GGGGGCUAUCUCC
URS0000D69EF4_12908/1-47   UG-G-GUUGGUCGGAA---GAUCUA-GGCCCAC-CGUA-------GGC-GGGGAGAAUUCCC
URS0000D69064_12908/1-47   UG-G-GUUGGUCGGAA---GAUCUG-GGCCCAC-CGUA-------GGC-GGGGAGAAUUCCC
URS0000D677B0_12908/1-47   AG-G-GUUGGUCGAAA---GACCGA-GGCCCAC-CGUA-------GGC-GGGGAAAGUUCCC
URS0000D6B816_12908/1-48   CG-G-UCUGGGCUCAG---GCUCUUUGGACCAC-CGAA-------GGC-GGGGAAAAUUCCC
URS0000D6CCE1_12908/1-48   UG-G-UCUGGGCAGAA---GCUCUUUGGACCAC-CGUA-------GAC-GGGGAGAAUUCCC
URS0000D6D33C_12908/1-48   UG-G-CUUGGGCGUAA---GCUCUUUGGGCCAC-CGCA-------GGC-GGGAAGAAUUUCC
URS0000D6972F_12908/1-48   UG-G-CUUGGGCGUAA---GUUCUUUGGGCCAC-CGCA-------GGC-GGGAAGAAUUUCC
URS0000D68FF1_657324/1-48  UG-G-ACUGGGCGAGA---GCUCUUUGGUCCAC-CGUA-------GAC-GGGAAGAAUUUCC
URS0000D6CEFB_12908/1-48   UG-G-UCUGGGCGAAA---GUUCUUUGGACCAC-AGUA-------GGC-GGGAAGAAUUCCC
URS0000D69DD0_12908/1-48   UG-A-ACUGAGCGAAA---GCUCUUUGGUUCAC-CGUA-------GAC-GGGAAGAAUUUCC
URS0000D66465_1280668/1-48 UG-A-UCUGAGCGAAA---GCUCUUUGGAUCAC-CGUA-------GGC-GGGAAGAAUUUCC
URS0000D66DA0_12908/1-48   UG-G-UCUGGGCGUAA---GCUCUUUGGACCAC-CGUA-------GGC-GGGAUGAAGUUCC
URS0000D6B5D9_12908/1-48   UG-G-UCUGGGCGAAA---GCUCUUUGGACCAC-CGUA-------GGC-GGGAAGAAUUUCC
URS0000D686A6_12908/1-48   UG-G-UCUGGGCGAAA---GCUCUUUGGACCAC-CGAA-------GGC-GGGAAGAAUUUCC
URS0000D65859_12908/1-48   UG-G-UCUGGGCGAAA---GCUCUUUGGACCAC-CGCA-------GGC-GGGAUGAAUUUCC
URS0000D67222_397290/1-48  CG-G-UCUGGGCGAGA---GCUCUUUGGACCAC-CGUA-------GGC-GGGAAGAAUUUCC
URS0000D69784_12908/1-48   UG-A-UCUGGGCGAAA---GCUCUUUGGACCAC-CGUA-------GGC-GGGAAGAAUAUCC
URS0000D65FAE_12908/1-48   AG-G-CUUGGGCGAGA---GCUCUUUGGGCCAC-CGUA-------GGC-GGGAAGAAUUUCC
URS0000D6C02A_12908/1-48   UG-G-UCUGGGUGAAA---GCUCUUGGGACCAC-CAAA-------GGC-GGGAACAGUUCCC
URS0000D6D41D_12908/1-47   UG-G-CUUGGGCGAAA---GCUCUG-GGGCCAU-CGCA-------GGC-GGGGAGCAUAUCC
URS0000D6B6E0_12908/1-49   CG-G-ACUGGUCGAAUA--GAUCUU-GGUCCAC-CCUGC------GGC-GGGGAUAUUCCCC
URS0000D69C82_12908/1-48   UG-G-GCUGGUCAUUA---GACCUG-GGUCCAC-CUGAC------GAC-GGGGCGAGUCCCC
URS0000D698CB_12908/1-48   UG-G-GCUGGUCAUUA---GACCUG-GGUCCAC-CUGAC------GAC-GGGGCGAGCCCCC
URS0000D6859E_12908/1-49   UG-G-GCUGGUCGGAA---GACCUU-GGUCCAC-CUGGAC-----GGC-GGGGCAAGCCCCC
URS0000D69162_12908/1-51   UG-G-GCUGAACAUUAUGCGUUCCU-GGUCCAU-CGACA------GGC-GGGGAUAUACCUC
URS0000D6AE69_12908/1-51   UG-G-GCUGAGCAAUAUGCGCUCCU-GGUCCAC-CGAAA------GGC-GGGGAUAUACCCC
URS0000D665F1_12908/1-48   AG-G-GCUAGUCGAAA---GACUCU-GGUCCAC-CGGCU------GAC-GGGGAUUUACCCC
URS0000D6C290_12908/1-49   CG-G-GCUGGUCAUCGU--GACCCA-GGUCCAC-CUUUC------GAC-GGGUAAGACACCC
URS0000D665F5_12908/1-48   AG-G-GCUGGUCUAGA---GACCCU-AGCCCAC-CGAAA------GGC-GGGGGCCUUCCCC
URS0000D68AB9_12908/1-48   CG-G-GCUGGUCGAUGC--GACCCU-GGCCCAC-CCAC-------AGA-GGGGAAUUUCCCC
URS0000D6A5A4_12908/1-48   CG-G-GCUGGUCGAUGU--GACCCU-GGCCCAC-CCUC-------AGA-GGGGAAUUUCCCC
URS0000D6CD3C_12908/1-48   UG-G-ACUGGUCGAAA---GACCAU-GGUUCAC-CUGGU------GGC-GGGGAUAUACCCC
URS0000D6618E_12908/1-49   UG-G-CCUGGUCGGAA---GACCCG-GGUCCACAUCAAU------GAC-GGGCGAGACGCCC
URS0000D691A2_665943/1-48  UG-G-ACUGGCUGAAA---GGCCCG-GGUCCAC-CCAGC------GGC-GGGGGAAGUCCCC
URS0000D65955_12908/1-48   UG-G-ACUGGCUGAAA---GGCCCG-GGUCCAC-CCAGC------GGC-GGGGGGAGUCCCC
URS0000D6BB2D_877420/1-49  UG-G-GCUGGCAGAAA---UGUCAA-GGUCCAA-CCUAUC-----GGC-GGGGAGACUCCCC
URS0000D68EF6_12908/1-50   UG-G-GCUGGUCGCAA---GACCCG-GGUCCAA-CCAAACG----GGC-GGGUAAAGACGAC
URS0000D6575C_553184/1-49  UG-G-ACUGGCUUUUGU--GGCCUU-GGUCCAC-CCUAC------GGC-GGGGGAAGUCCCC
URS0000D6AFB9_12908/1-48   UG-U-GCUGUUCGAAA---GACCCG-GGUCCAU-CAGCG------GAU-GGGGAGGUUCCCC
URS0000D68804_12908/1-48   UG-G-GCUGGUCGAAA---GACCCG-GGUCCAU-CAGCG------GAU-GGGGGGGUUCUGC
URS0000D68725_12908/1-53   UG-G-GCUGGUCGAAA---GACCCG-GGUCCAU-CAGC-GGAUGGGGA-GNGGUAUAUACCC
URS0000D65A92_12908/1-47   UG-G-GCUGGUCGAAA---GACCCG-GGUCCAU-CAGC-------GGA-UGGGGAGGUUCCC
URS0000D6BB1C_12908/1-47   UG-G-ACUGGUCAUAG---GGCCCA-GGUCCAC-CCGA-------GGC-GGGGGAAGUCCCC
URS0000D69481_12908/1-49   UG-G-GCUGGCCGUGA---GGCCCU-GGUCCAC-CCUUUA-----GGC-GGGGACAUCCCCC
URS0000D6D100_12908/1-49   UG-G-GCUGGCCGUGA---GGCCCU-GGUCCAC-CCUUU-----AGGC-GGGGAUACCCCCU
URS0000D65E7B_12908/1-48   UG-G-GCCGGCCGAAA---GACCCA-GGUCCAU-AUACU------GGU-GGGUAAGACACCC
URS0000D66D54_12908/1-48   UG-G-GCUGGCUGAAA---AGCCCU-GGUCCAC-CGAAU------GGC-GGGGAUUUCCCCG
URS0000D6A754_12908/1-50   UG-G-GCUGGUCGAAA---GACCCG-GGUCCAA-CCGAU----UUGGU-AGGCAGACUGCCU
URS0000D6B961_12908/1-49   CG-G-GCUGGUCGUAU---GACCAU-GGUCCAC-CGAAAC-----GGC-GUGGGGACCCCGC
URS0000D6A038_877418/1-49  UG-G-GCUGGUUGAAA---AACCUC-GGUCCAC-CGACAC-----GGC-GUGGGGAUCCCGC
URS0000D6A986_12908/1-50   UG-G-GCUGGUCGAAA---GACCCA-UGUCCAA-CCACU----ACGGA-GGGGAGACUCCCC
URS0000D695B3_1042156/1-49 UG-G-GCUGACCGAAA---GGUCUUUGGCCCAC-CGGCU------GGC-GGGGAUUUACCCC
URS0000D665A3_12908/1-49   UG-G-GCUGGCCGCAU---GGUCUUUGGUCCAC-CGACG------GGC-GGGGAUUUACCCC
URS0000D6B9D7_12908/1-47   UG-G-GCUGGCCGAAA---GGCCCA-GGUCCAC-CGGA-------GGC-GGGGGCAUUCCCC
URS0000D6AB5D_12908/1-46   UG-G-GCUGGCCGGAA---GGUCUA-GGUCCAC-CGC--------GGC-GGGGAUAUUCCCC
URS0000D6696A_12908/1-46   UG-G-GCUGGCCGAAA---GGUCUA-GGUCCAC-CGC--------GGC-GGGGAUAUUCCCC
URS0000D66D19_1262894/1-47 CG-G-GCUGGUCUUCG---GACCCG-GGUCCAC-CUGC-------GGC-GGGGAUGUUCCCC
URS0000D66D19_12908/1-47   CG-G-GCUGGUCUUCG---GACCCG-GGUCCAC-CUGC-------GGC-GGGGAUGUUCCCC
URS0000D6B10C_12908/1-48   AG-G-GCUGGUCGCAA---GACCCU-GGUCCAC-CAAGC------AGC-GGGGAUAUACCCC
URS0000D6C53A_12908/1-48   GG-G-GCUGGUCGAAA---GAUCUG-GGUCCAC-CGUGG------AGC-GGGGAAUUUCCCC
URS0000D6902E_12908/1-47   CG-G-GCUGAUCGCAA---GAUCCG-GGUCCAC-CUUC-------GGC-GGGGAUGUUCCCC
URS0000D6902E_1262957/1-47 CG-G-GCUGAUCGCAA---GAUCCG-GGUCCAC-CUUC-------GGC-GGGGAUGUUCCCC
URS0000D6CC69_927704/1-47  CG-G-GCUGGCCGACA---GGCCCA-GGUCCAC-CGUG-------GGC-GGGGAAGUUCCCC
URS0000D6799A_12908/1-47   UG-G-GCUGAACGCAA---GCUCCG-GGUCCAU-CGAG-------GGC-GGGGAAGUUCCCC
URS0000D669F8_12908/1-50   UG-G-GCUGAUCGAAA---GAUCUU-GGUCCAA-CCGAAU---G-GGC-GGGGAGUCCCCCC
URS0000D68BA0_12908/1-47   UG-G-GCUGGUCAGGU---GACCCG-GGUCCAC-CUGC-------GCU-GGGGAAGUUCCCC
URS0000D6BFF8_12908/1-47   UG-G-GCUGGUCGAAA---GACCCA-GGUCCAU-CUUU-------GGC-GGGCCAGACGCUC
URS0000D6AFF4_12908/1-49   GG-G-GCUGGUCGAAA---GACCCU-GGUCCAC-UGAGAC-----GGC-GUGGGGAUCCCGC
URS0000D6AD80_12908/1-49   UG-G-ACUGGCCGAAA---GGCCCU-GGUCCAC-CGAAAC-----GGC-GUGGGGAUCCCGC
URS0000D68EE2_877424/1-49  GG-G-GCUGACCGAAA---GGUCUU-GGUCCAC-CGAAAC-----GGC-GUGGGGAUCCCGC
URS0000D68FDE_1232426/1-48 UG-G-GCUGGCCGAGA---GGCCCU-GGCCCAC-CCAAA------GGC-GGGGAUAUUCCCC
URS0000D68FDE_1232436/1-48 UG-G-GCUGGCCGAGA---GGCCCU-GGCCCAC-CCAAA------GGC-GGGGAUAUUCCCC
URS0000D66B65_469597/1-48  UG-G-GCUGGUCAUAA---GACCCG-GGUCCAU-CUAUU------AGU-GGGUAAGACACCC
URS0000D6B0C6_12908/1-48   UG-G-GCUGGUCGUAA---GACCAG-GGUCCCU-CAAUU------UGC-GGGUAAGACACCC
URS0000D68324_12908/1-48   UG-G-GCUGGUCGUAA---GACUAG-GGUCCCU-CAAUU------UGC-GGGUAAGACACCC
URS0000D6B972_12908/1-48   UG-G-GCUGGUCGUAA---GACCCG-GAUCCCU-CAAUU------UGC-GGGUAAGACACCC
URS0000D69D1D_1262881/1-48 UG-G-GCUGGUCGAAA---GAUCUG-GGUCCAC-CACAA------GGC-GGGUAAGACACCC
URS0000D66E92_12908/1-48   UG-G-GCUGGUCGUAA---GAUCUG-GGUCCAC-CACAU------GGC-GGGGAAGACACCC
URS0000D6A3DE_12908/1-48   UG-G-GCUGGUCGUAA---GAUCUG-GGUCCAC-CACAU------GGC-GGGUAAGACACCC
URS0000D686D4_12908/1-48   GG-G-GCUGGUCGAAA---GACCCG-GGUCCAU-CUGCU------GGC-GGGUAAGACACCC
URS0000D6CAEA_12908/1-48   GG-G-GCUGGUCGAAA---GACCCA-GGUUCAU-CUGCU------GGC-AGGUAAGACACCC
URS0000D6B8C5_12908/1-46   UG-G-GCUGGUCGAAA---GACCCG-GGU-CAU-CUUAU------GGC-GG-UAAGACACCC
URS0000D65DEF_12908/1-47   GG-G-GCUGGUCGAAA---GACCCG-GGUCCAC-CAAC-------GGC-GGGGAAGACACCC
URS0000D68E89_12908/1-48   UG-G-GCUGGUCGCAA---GACCCG-GGUCCAC-CAAAU------GGG-GGGAAAGACCCCC
URS0000D6C77D_12908/1-48   UG-G-GCUGGCCGAAA---GCCCCG-GGUCCAC-CAAUC------GGC-GGGUAAGACACCC
URS0000D65E44_877420/1-48  UG-G-CCUGGUCGAAA---GACCCG-GGGCCAC-CCAAA------AGC-GGGUAAGACACCC
URS0000D66FDC_12908/1-48   UG-G-GCUGGUCGUAA---GACCCG-GGUCCAC-CAAAC------GGC-GGGGAUGAAACCC
URS0000D670C1_657324/1-48  UG-G-GCUGGUCGAAA---GACCCG-GGUCCAC-CAAAA------AGC-GGGUAAGACACCC
URS0000D686B9_1280666/1-48 UG-G-GCUGGUCGAAA---GACCCG-GGUCCAC-CAACA------AGC-GGGUAAGACACCC
URS0000D6A7BF_12908/1-48   UG-G-GCUGGUCGAAA---GACCCG-GGUCCAC-CUAUU------GGC-GGGUAAGACACCC
URS0000D682BF_12908/1-48   UG-G-GCUGGUCGUAA---GACCCG-GCUCCACACAUA-------GGC-GGGUAAGACACCC
URS0000D688EA_12908/1-48   UG-G-GCUGGUCGUAA---GACCCG-GGUCCACACAUA-------GGU-GGGUAAGACACCC
URS0000D688DD_12908/1-48   UG-G-GCUGGUCGUAA---GACCCG-GGUCCACACAUA-------GGC-GGGUAAGACACCC
URS0000D6CD7E_12908/1-48   UG-G-GCUGGUCGAAA---GACCCG-GGUCCAC-CAAAU------GGC-GGGUAAGACACCC
URS0000D6893D_12908/1-49   UG-G-GCUGGUCGAAA---GACCCGGGGUCCAC-CAAAU------GGC-GGGUAAGACACCC
URS0000D66E85_12908/1-48   UG-G-GCUGGUCGAAA---GACCCA-GGUCCAC-CAAAU------GGC-GGGUAAGACACCC
URS0000D6B53E_12908/1-48   UG-G-GCUGGUCGAAA---GGCCCA-GGUCCAC-CAAAU------GGC-GGGUAAGACACCC
URS0000D66FFD_12908/1-48   UG-G-GCUGGUCGAAA---GGCCCG-GGUCCAC-CAAAU------GGC-GGGUAAGACACCC
URS0000D66FFD_1263008/1-48 UG-G-GCUGGUCGAAA---GGCCCG-GGUCCAC-CAAAU------GGC-GGGUAAGACACCC
URS0000D6742C_12908/1-48   UG-G-GCUGGUCGCAA---GACCCG-GGUCCAC-CAAAU------GGC-GGGGAAGACACCC
URS0000D6BB50_12908/1-48   UG-G-GCUGGUCGCAA---GACCCG-GGUCCAC-CAAAU------GGC-GGGUAAGACACCC
URS0000D67F2E_12908/1-47   UG-G-GCUGGUCGCAA---GACCCG-GGUCCAC-CAAA-------GGC-GGGUAAGACACCC
URS0000D6A799_12908/1-48   UG-G-GCUGGUCGUAA---GACCCG-GUUCCAC-CAAUC------GGC-GGGUAAGACACCC
URS0000D687BC_12908/1-48   UG-G-GCUGGUCGUAA---GACCCG-GGUCCAC-CAAUC------GGC-GGGUAAGACACCC
URS0000D6B8BA_12908/1-48   UG-G-GCUGGUCGUAA---GACCCG-GGUCCAC-CAAAC------GGC-GGGUAAGACACCC
URS0000D674F3_12908/1-48   UG-G-GCUGGUCGUAA---GACCCG-GGUCCAC-CAAAC------GGC-GGGGAAGACACCC
URS0000D68A96_12908/1-48   UG-G-GCUGGUCGUAA---GACCCG-GGUCCAC-CAAAC------GGC-GGGUAAGGCACCC
URS0000D6AD20_12908/1-48   CG-G-GCUGGUCGUAA---GACCCG-GGUCCAC-CAAUU------GGU-GGGUAAGACACCC
URS0000D667EE_12908/1-48   GG-G-GCUGGUCGUAA---GACCCG-GGUCCAC-CAAUU------GGC-GGGUAAGACACCC
URS0000D671A1_1280683/1-48 GG-G-GCUGGUCGAAA---GACCCG-GGUCCAC-CAAUU------AGC-GGGUAAGACACCC
URS0000D666FD_12908/1-48   UG-G-GCUGGUCGCAA---GACCCG-GGUCCAC-CAAUC------AGC-GGGUAAGACACCC
URS0000D6BC6C_12908/1-47   UG-G-GCUGGUCGAAA---GACCCG-GGUCCAC-CAUC-------GGC-GGGUAAGACACCC
URS0000D67275_12908/1-48   UG-G-GCUGGUCGUAA---GACCCG-GGUCCAC-CAAAU------GGU-GGGUAAGACAUCC
URS0000D69277_12908/1-48   UG-G-GCUGGUCGAAA---GACCCG-GGUCCACACAUU-------GGC-GGGUAAGAUACUC
URS0000D671CC_12908/1-48   UG-A-GCUGGUCGAAA---GACCCG-GGUCCACACAUU-------GGC-GGGUAAGACACUC
URS0000D6C067_12908/1-48   UG-A-GCUGGUCGAAA---GACCAG-GGUCCACACAUU-------GGC-GGGUAAGACACUC
URS0000D66B78_12908/1-48   UG-G-GCUGGUCGAAA---GACCCG-GGUCCAC-CAAAU------GGC-GGGUGUCUUACCC
URS0000D66B78_1262988/1-48 UG-G-GCUGGUCGAAA---GACCCG-GGUCCAC-CAAAU------GGC-GGGUGUCUUACCC
URS0000D659A6_12908/1-48   UG-G-GCUGGUCGAAA---GACCCG-GGUCCAC-CAAAU------GGC-GGGUAUCUUACCC
URS0000D67F7C_12908/1-48   UG-G-GCUGGUCGAAA---GACCCG-GGCCCAC-CAAAU------GGC-GGGUAUCUUACCC
URS0000D696CC_518637/1-48  AG-G-GCUGGUCGAAA---GACCCG-GGUCCAC-ACAAA------GGC-GGGUAAGACACCC
URS0000D6A864_12908/1-48   UG-G-GCUGGUCGUUA---GACCCG-GGUCCAC-ACCAA------GGC-GGGUAAGACACCC
URS0000D67DE4_12908/1-48   UG-G-GCUGGCCGGAA---GACCUG-GGCCCAC-CAAAC------GGC-GGGUAAGACACCC
URS0000D66CB1_12908/1-48   GG-G-GCUGGUCGCAA---GACCCG-GGUCCAU-CUAUC------GGC-GGGUAAGACACCC
URS0000D6CAC7_12908/1-48   -G-GAGCUGGUCGAAA---GACCCG-GGUCCAU-CCGUC------GGC-GGGUAAGACACCC
URS0000D6B186_12908/1-48   UG-G-GCUGGCCGAAA---GGCCCU-GGUCCAC-CCAAG------GGC-GGGGACUUUUUCC
URS0000D672E1_12908/1-48   UG-G-GCUGGCCGAAA---GGCCCU-GGUCCAC-CCAAG------GGC-GGGGACGUUUUCC
URS0000D6C706_12908/1-50   AG-G-GCUGGUCGAAA---GACCCA-GGUCCAA-CCUAU----UAGGC-GGGGAGACUCCCC
URS0000D6CD0A_12908/1-50   UG-G-GCUGGUCGGAA---GACCCA-GGUCCAA-CCUAAU---C-GGC-GGGGAGGCUCCCC
URS0000D65D84_12908/1-50   UG-G-GCUGGUCGAAA---GACCCA-GGUCCAA-CCUAAU---C-GGC-GGGGAGGCUCCCC
URS0000D6937D_12908/1-50   UG-G-GCUGGUCGAAA---GACCCA-GGUCCAA-CCUGAU---C-GGC-GGGGAGGCUCCCC
URS0000D6C1AD_12908/1-51   UG-G-GCUGGUCGUAA---GACCCA-GGUUCAA-CCUAAU---UAGGC-GGGGAGACUCCCC
URS0000D67FA6_12908/1-51   UG-G-GCUGGUCGUAA---GCCCCA-GGUCCAA-CCUAAU---UAGGC-GGGGAGACUCCCC
URS0000D670CF_12908/1-51   UG-G-GCUGGUCGUAA---GACCCA-GGUCCAA-CCUAAU---UAGGC-GGGGAGACUCCCC
URS0000D6ABDD_12908/1-54   UG-G-GCUGGUCGAAA---GGCCCA-GAUCCAA-UCAAAAGAACAGGC-GGGGAAAUUCCCC
URS0000D65916_12908/1-54   UG-G-ACUGGUCGAAA---GACCCA-GAUCCAA-CCAAAAGAACAGGC-GGGGGAACUCCCC
URS0000D6A5B0_12908/1-54   UG-G-GCUGGUCGAAA---GAUCCA-GAUCCAA-CCAAAAGAACAGGC-GGGGGAACUCCCC
URS0000D6CDD5_12908/1-54   UG-G-ACUGGUCGAAA---GACCCA-GGUCCAA-CCAAAAGAAUAGGC-GGGGGAACUCCCC
URS0000D6C810_12908/1-54   UG-G-GCUGGUCGAAA---GACCCA-GGUCCAA-CCAAAAGAAUAGGC-GGGGGAACUCCCC
URS0000D68EED_12908/1-54   UG-G-GCUGGUCGAAA---GACCCA-GGUCCAA-CCAAAAGAACAGGC-GGGGAAACUCCCC
URS0000D66A9A_12908/1-54   UG-G-GCUGGUCGAAA---AACCCA-GGUCCAA-CCAAAAGAACAGGC-GGGGGAACUUCCC
URS0000D680A9_411489/1-54  UG-G-GCUGGUCGAAA---AACCCA-GGUCCAA-CCAAAAGAACAGGC-GGGGGAACUCCCC
URS0000D680A9_12908/1-54   UG-G-GCUGGUCGAAA---AACCCA-GGUCCAA-CCAAAAGAACAGGC-GGGGGAACUCCCC
URS0000D6ADAF_12908/1-54   UG-G-GCUGGUCGAAA---AACCCA-GGUCCAA-CCAAAAGAACAGGC-GGGGGAACUCUCC
URS0000D685FA_12908/1-54   UG-G-GCUGGUCGAAA---GACCCA-GGUCCAA-CCAAAAGAACAGGC-GGGGGAACUCCCC
URS0000D67F74_12908/1-54   UG-G-GCUGGUCGAAA---GACCUA-GAUCCAA-CCAAAAGAACAGGC-GGGGGAACUCCCC
URS0000D66155_877418/1-51  UG-G-GCUGGUCGAAA---GACCCU-GGUCCAA-CCUACG---ACGGC-GGGCAAACUGACC
URS0000D65FAF_12908/1-49   UG-G-GCUGGUCGAAA---GACCCA-GGUCCAA-CCUAUC-----GGC-GGGCAGACUGUCC
URS0000D6C93F_12908/1-51   UG-A-ACUGGUCGAAG---GACCCA-GGUUCAA-CUUAAU---UAGGC-GGGCAGACUGAUC
URS0000D695E9_12908/1-51   UG-A-ACUGGUCGAAG---GACCCG-GGUUCAA-CUUAAU---UAGGC-GGGCAGACUGACC
URS0000D676B7_12908/1-51   UG-A-ACUGGUCGAAA---GACCCA-GGUUCAA-CCUAAC---UAGGC-GGGCAGACUGACC
URS0000D68766_12908/1-51   UG-A-GCUGGUCGAAA---GACCCA-GGUUCAA-CCUAAC---UAGGC-GGGCAAACUGUCC
URS0000D6C923_12908/1-51   UG-A-GCUGGUCGAAA---GACCCA-GGCUCAA-CCUAAU---UAGGC-GGGCAAACUGUCC
URS0000D6621C_12908/1-47   UG-G-GCUGGUCGCAA---GACCCG-GGUCCAC-UACA-------AGC-GGGGAUGUUCCCC
URS0000D6BEF6_12908/1-47   UG-G-GCUGAUCGAAA---GAUCCU-GGUCCAC-CGCA-------GGC-GGGGGGUUCCCCC
URS0000D6CA69_12908/1-47   CG-G-GCUGAUCGAAA---GAUCCA-GGUCCAC-CGCA-------GGC-GGGGGGUUUCCCC
URS0000D66BDE_12908/1-47   CG-G-GCUGAUCGAAA---GAUCCA-GGUCCAC-CGCA-------GGC-GGGGGGAUUCCCC
URS0000D6826E_12908/1-48   UG-G-GCUGGUCGAAA---GACUCG-GGUCCAC-CCGUC------GGC-GGGGACUUUCCCC
URS0000D67481_12908/1-48   UG-G-GCUGGUCGAGA---GACCCA-GGUCCAC-CGAAA------GGC-GGGGAUUUACCCC
URS0000D6BE84_12908/1-48   GG-G-GCUGGUCGAAA---GACCCU-GGUCCAC-CGAGC------GGC-GGGGGAAACCCCG
URS0000D66E45_12908/1-48   -G-GAGCUGGUCGAAA---GACCCU-GAUCCAC-CGAGC------GGC-GGGGGAAACCCCC
URS0000D65987_12908/1-48   UG-G-GCUGGUCGAAC---GACCCU-GGUCCAC-CGAGC------AGC-GGGGAAUUCCCCG
URS0000D67E93_12908/1-49   UGAG-GCUGGUCGAAA---GACCCU-GGUCCAC-CGAAC------GGC-GGGGGAAUCCCCC
URS0000D65C3D_12908/1-49   UGAG-GCUGGUCGUAA---GACCCU-GGUCCAC-UGAAC------GGC-GGGGGAAUCCCCC
URS0000D66EF2_12908/1-48   UG-G-GCUGGUCGAGA---GACCCU-GGUCCAC-CGAGC------GGC-GGGGGGAUUCCCC
URS0000D69E4B_12908/1-48   UG-G-UCUGGUCGAAA---GACUCA-GGUCCAC-CGAGC------GGC-GGGGGAUUUCCCC
URS0000D65831_12908/1-48   UG-G-GCUGGUCGAAA---GACUCA-GGCCCAC-CGAGC------GGC-GGGGAAUUUCCCC
URS0000D6CAD4_12908/1-48   UG-G-GCUGGUCAAGC---GACCCU-GGUCCAC-CGAGC------GGC-GGGGAAUUUCCCC
URS0000D68895_12908/1-48   UG-G-GCUGGUCGAAA---GAUCCU-GGUCCAC-CGAAC------AGC-GGGGAAUUUCUCC
URS0000D6C2AF_12908/1-48   UG-G-GCUGGUCGAAA---GACCCU-GGUCCAC-CGAGC------GGC-GGGGAGAUUCCUC
URS0000D66CE5_12908/1-48   CG-G-GCUGGUCGAAA---GCCCCU-GGUCCAC-CGAAC------AGC-GGGGAAUUUCCCC
URS0000D6581F_12908/1-48   CG-G-GCUGGUCGAAA---GCCCCU-GGUCCAC-CGAAC------AGU-GGGGAAUUUCCCC
URS0000D67C9A_1235800/1-48 UG-G-GCUGGUCGAAA---GACCCU-GGUUCAU-CGAAC------GGC-GGGGAAUUUCCCC
URS0000D681AD_12908/1-48   CG-G-GCUGGUCGAAA---GACCAU-GGUCCAC-CGAGC------GGC-GGGGAAUUUCCCC
URS0000D6AF9F_12908/1-48   UG-G-GCUGGUCGAAA---GGCCCU-GGUCCAC-CGAAA------GGC-GGGGAAUUUCCCC
URS0000D6D3CA_12908/1-48   CG-G-GCUGGUCGAAA---GACCCU-GGUCCAC-CGAAC------GGC-GGGGAAUUUCCCC
URS0000D6CE7C_478749/1-48  UG-G-GCUGGUCGAAA---GACCCU-GGUUCAC-CGAGC------GGC-GGGGAAUUUCCCC
URS0000D6B177_12908/1-48   UG-G-GCUGGUCGAAA---GACCCU-GGUCCAC-CGAGC------GGC-GGGGAAUUUCCCC
URS0000D6C04C_12908/1-48   UG-G-GCUGGUCGAAA---GACCCU-GGUCCAC-CGAAC------GGC-GGGGAAUUUCCCC
URS0000D6C04C_1235800/1-48 UG-G-GCUGGUCGAAA---GACCCU-GGUCCAC-CGAAC------GGC-GGGGAAUUUCCCC
URS0000D67C49_12908/1-48   UG-G-GCUGGUCGAAA---GACCCU-GGUCCAC-CGAAU------GGC-GGGGAAUUUCCCC
URS0000D69771_12908/1-48   AG-G-GCUGGUCGAAA---GACCCU-GGUCCAC-CGAAC------GGC-GGGGAAUUUCCAC
URS0000D6B27A_12908/1-48   CG-G-GCUGGUCGAAA---GACCCU-GGUCCAC-CGAGA------AGC-GGGGGAAUCCCCC
URS0000D66DEA_12908/1-48   UG-G-GCUGGUCAAAA---GACCUU-GGUCCAC-CGAGU------GGC-GGGGAGAUUCCCC
URS0000D667C6_12908/1-46   UG-G-GCUGGUCGCAA---GACCCA-GGUCCAU-CAAC-------GGC-GGGAAGUUCCCC-
URS0000D6AE1E_12908/1-47   UG-G-GUUGGUCGCAA---GACUCA-GGUUCAU-CAUG-------GGC-GGGGAAGUUCCCC
URS0000D6B185_12908/1-47   AG-G-GCUGGUCGAGA---GACCCA-GGUCCAU-CGAG-------GGC-GGGGAAGUCCCCC
URS0000D6CD01_12908/1-47   AG-G-GCUGGUCGAAA---GACCCA-GGUCCAU-CGAA-------GGC-GGGGAAGUCCCCC
URS0000D684A2_12908/1-47   UG-G-GCUGGUCGCAA---GACCCG-GGUCCAU-CGAG-------AGC-GGGGAUGUUCCCC
URS0000D6A89C_12908/1-47   GG-G-GCUGGUCGAAA---GACCCG-GGUCCAU-CAAG-------UGC-GGGGAUGUUCCCC
URS0000D67406_12908/1-47   GG-G-GCUGGUCGAAA---GACCCG-GGUCCAU-CGCG-------AGC-GGGGAUGUUCCCC
URS0000D69581_12908/1-47   GG-G-GCUGGUCGUAA---GACCCG-GGUCCAU-CGAG-------AGC-GGGGAUGUUCCCC
URS0000D68C4E_12908/1-47   GG-G-GCUGGUCGAAA---GACCCG-GGUCCAU-CGAG-------AGC-GGGGAUGUUCCCC
URS0000D6A258_12908/1-47   AG-G-GCUGGUCGAAA---GACCCG-GGUCCAU-CGAG-------AGC-GGGGAUGUUCCCC
URS0000D6601B_12908/1-47   AG-G-GCUGGUCGAAA---GACCCA-GGUCCAU-CAAG-------GGU-GGGGAAGUACUCC
URS0000D6C80F_12908/1-47   UG-G-GCUGGUCGUAA---GACCCA-GGUCCAU-CUCG-------GGC-GGGGAAGUUCCCC
URS0000D66707_12908/1-47   UG-G-GCUGGUCAUAA---GACCCA-GGUCCAU-CACA-------GGC-GGGGAAGUUCCCC
URS0000D69099_1262993/1-47 UG-G-GCUGGUCGCAA---GACCCG-GGUCCAU-CAUG-------GGC-GGGGAAGUUCCCC
URS0000D68C17_12908/1-47   UG-G-GCUGGUCGCAA---GACCCA-GGUCCAU-CAAC-------GGC-GGGGAAGUUCCCC
URS0000D6599D_877424/1-47  UG-G-GCUGGUCGUAA---GACCCA-GGUCCAU-CAAC-------GGC-GGGGAAGUUCCCC
URS0000D6599D_12908/1-47   UG-G-GCUGGUCGUAA---GACCCA-GGUCCAU-CAAC-------GGC-GGGGAAGUUCCCC
URS0000D6CDFE_657324/1-47  AG-G-GCUGGUCGAAA---GACCCA-GGUCCAU-CAUG-------GGC-GGGGAAGUUCCCC
URS0000D6954F_12908/1-48   AG-G-GCCGGUCGAAA---GACCCA-GGUCGAU-UUGAC------GGC-GGGGAAGUUCCUC
URS0000D68D0E_877418/1-48  CG-G-GCUGGUCGAAA---GACCCU-GGUCCAU-CUACC------GGC-GGGGAAGUUCCUC
URS0000D6BFF9_877418/1-48  AG-G-GCUGGUCGAGA---GACCCA-GGUCCAU-CUACC------GGC-GAGGAAGUUCCUC
URS0000D6BFF9_12908/1-48   AG-G-GCUGGUCGAGA---GACCCA-GGUCCAU-CUACC------GGC-GAGGAAGUUCCUC
URS0000D6A0C4_12908/1-47   UG-G-GCUGGUCGAAA---GACCCA-GGUCCAU-CUCU-------GGC-GAGGAAGUUCCUC
URS0000D6C6F6_12908/1-47   UG-G-GCUGGUCGAAA---GACCCA-GGUCCAU-CUUU-------GGC-GAGGAAGUUCCUC
URS0000D69401_12908/1-47   CG-G-GCUGGUCGAAA---GACCCA-GGUCCAU-CUUU-------GGC-GAGGAAGUUCCUC
URS0000D65CFB_12908/1-47   CG-G-GCUGGUCGAAA---GACCCU-GGUCCAU-CUUU-------GGC-GAGGAAGUUCCUC
URS0000D66AE2_12908/1-48   UG-G-GCUGGUCGAAA---GACCCA-GGUCCAU-CUACU------GGC-GAGGAAGUUCCUC
URS0000D6887E_12908/1-47   UG-G-GCUGGUCGAAA---GACCCA-GGUCCAU-CGCU-------GGC-GGGGAAGUUCCUC
URS0000D69637_12908/1-48   AG-G-GCUGGUCGAAA---GACCCA-GGUCCAU-CUGAU------GGC-GGGGAACUUCCCU
URS0000D6833D_12908/1-48   AG-G-GCUGGUCGAAA---GACCCA-GGUCCAU-CUGAC------GGC-GGGAAAGUUCCUC
URS0000D6B8DA_12908/1-48   GG-G-GCUGGUUGAAA---GACCCA-GGUCCAU-CUGAC------GGC-GGGGAAGUUCCUC
URS0000D66B43_12908/1-47   GG-G-GCUGGUCGAAA---GACCC--GGUCCAU-CUGAU------GGC-GGGGAAGUUCCUC
URS0000D6D428_12908/1-48   GG-G-GCUGGUCGAAA---GACCCG-GGUCCAU-CUGAU------GGC-GGGGAAGUUCCUC
URS0000D6B3BA_12908/1-48   GG-G-GCUGGUCGAAA---GACCCA-GGUCCAU-CUGAU------GGC-GGGGAAGUUCCUC
URS0000D6C71A_877420/1-47  UG-G-GCUGGUCGAGA---GACCCA-GGUCCAU-CUGC-------GGC-GGGGAAGUUCCCC
URS0000D69755_12908/1-48   UG-G-GCUGGUUGAAA---GACCCG-GGUCCAC-CUGUC------GGC-GGGGAAGUGCCCC
URS0000D67891_12908/1-48   UG-G-GCUGGUCGAAA---GACCCG-GGUCCAC-CUGUC------GGC-GGGGAAGUGCCCG
URS0000D666F1_12908/1-47   UG-G-GCUGGUCGAAA---GACCCG-GGUCCAC-CUGC-------GGC-GGGGAAGUUCCCC
URS0000D6AD1F_1235799/1-50 UG-G-GCUGUUCGAAA---GAUCUG-GGUUCAA-CCUAA----UCGGC-GGGGAGACUCCCC
URS0000D69358_12908/1-48   AG-G-GCUGGUCGCGA---GACCCU-GGUCCAU-CUUUA------GGA-GGGGAAGUAUCCC
URS0000D65F78_12908/1-48   AG-G-GCUGGUCGCGA---GACCCU-GGUCCGU-CUUUA------GGA-GGGGAAGUAUCCC
#=GC SS_cons               <<.<.<<<<<<<____...>>>>--.>>>>>>:.:::::......:::.:::::::::::::
#=GC RF                    UG.G.GCUGGUCGAAA...GACCCg.GGUCCAC.CgaAa......GGC.GGGGAaguUCCCC
//
