INFERNAL1/a [1.1.5 | Sep 2023] NAME Cupriavidus-1 ACC RF02949 DESC Cupriavidus-1 RNA STATES 248 NODES 62 CLEN 78 W 98 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 21:06:49 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02949/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 1.831055 CKSUM 1023757911 NULL 0.000 0.000 0.000 0.000 GA 45.50 TC 45.80 NC 45.10 EFP7GF -7.9464 0.71903 ECMLC 0.52117 -11.28817 0.56876 1600000 579286 0.002072 ECMGC 0.36310 -15.88267 -3.22721 1600000 39605 0.010100 ECMLI 0.45283 -10.19962 2.78459 1600000 429192 0.002796 ECMGI 0.39756 -10.50319 0.86974 1600000 36787 0.010873 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 3 0 1 98 119 -5.137 -15.606 -0.042 IL 1 1 2 1 3 7 34 118 161 -0.610 -4.491 -1.736 0.000 0.000 0.000 0.000 IR 2 2 3 2 2 7 33 100 121 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 1 ] - - - - - - B 3 2 3 112 4 5 32 98 119 [ BEGR 36 ] - - - - - - S 4 3 1 5 3 0 0 54 74 -7.926 -0.021 -6.580 IL 5 5 2 5 3 1 1 56 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 46 - a - - - ML 6 5 2 8 3 1 1 54 74 -7.926 -0.021 -6.580 0.691 -0.918 -0.200 -0.021 D 7 5 2 8 3 0 0 52 73 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 1 55 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 47 - C - - - ML 9 8 3 11 3 1 1 52 73 -7.926 -0.021 -6.580 -0.917 1.104 -1.727 0.027 D 10 8 3 11 3 0 0 51 72 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 1 54 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 48 - g - - - ML 12 11 3 14 3 1 1 51 72 -7.926 -0.021 -6.580 -0.420 -0.541 0.924 -0.583 D 13 11 3 14 3 0 0 50 71 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 1 53 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 49 - u - - - ML 15 14 3 17 3 1 1 50 71 -7.926 -0.021 -6.580 -0.683 0.549 -1.463 0.634 D 16 14 3 17 3 0 0 49 70 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 1 52 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 50 - G - - - ML 18 17 3 20 3 1 1 49 70 -7.926 -0.021 -6.580 -1.500 -2.707 1.704 -2.093 D 19 17 3 20 3 0 0 48 69 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 1 51 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 51 - U - - - ML 21 20 3 23 3 1 1 48 69 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 22 20 3 23 3 0 0 47 67 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 1 50 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 52 - A - - - ML 24 23 3 26 3 1 1 47 68 -7.926 -0.308 -2.412 1.702 -2.295 -1.935 -1.830 D 25 23 3 26 3 0 0 46 67 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 1 49 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 53 - a - - - ML 27 26 3 29 5 1 1 46 67 -6.819 -0.047 -6.634 -6.846 -7.738 0.363 0.361 -0.958 -0.129 D 28 26 3 29 5 0 0 45 66 -5.885 -0.367 -5.146 -3.521 -3.434 IL 29 29 3 29 5 1 1 47 67 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 54 93 C G - - MP 30 29 3 34 6 2 2 45 66 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -4.477 -4.376 -4.179 -0.615 -2.913 -4.600 3.528 -3.716 -4.226 -0.364 -4.494 -2.322 0.609 -4.551 -0.618 -3.068 ML 31 29 3 34 6 1 1 44 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 3 34 6 1 1 44 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 3 34 6 0 0 41 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 1 45 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 1 45 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 55 92 c g - - MP 36 35 6 40 6 2 2 43 64 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -3.366 -2.929 -3.353 0.724 -2.764 -4.055 2.430 -3.273 -3.381 2.123 -3.823 -0.757 1.110 -3.500 -0.408 -2.254 ML 37 35 6 40 6 1 1 42 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 1 42 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 0 39 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 1 43 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 1 43 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 56 91 G C - - MP 42 41 6 46 6 2 2 41 62 -4.718 -9.031 -0.075 -7.808 -8.088 -8.483 -4.672 -3.060 -4.764 0.247 -5.134 -4.666 -0.516 -5.002 -4.282 3.621 -4.624 -0.757 -0.903 -4.422 -2.549 -3.642 ML 43 41 6 46 6 1 1 40 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 1 40 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 0 37 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 1 41 62 -3.014 -1.461 -1.194 -4.932 -5.708 -5.368 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 1 40 61 -2.687 -0.396 -6.198 -4.366 -5.472 0.000 0.000 0.000 0.000 [ MATP 48 ] 58 89 g c - - MP 48 47 6 52 6 2 2 39 60 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -3.231 -2.454 -3.247 1.092 -3.323 -3.963 1.463 -3.509 -3.355 2.679 -3.783 0.509 0.699 -3.276 -0.928 -2.212 ML 49 47 6 52 6 1 1 38 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 1 38 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 0 35 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 1 39 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 1 39 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 59 88 c g - - MP 54 53 6 58 6 2 2 37 58 -9.092 -9.031 -0.078 -7.808 -4.581 -8.483 -3.126 -3.015 -3.153 1.189 -2.437 -3.877 2.573 -3.023 -3.161 0.926 -3.634 -1.025 1.349 -3.334 0.656 -2.088 ML 55 53 6 58 6 1 1 36 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 6 1 1 37 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 6 58 6 0 0 34 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 1 37 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 1 37 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 60 87 g c - - MP 60 59 6 64 6 2 2 35 56 -4.682 -8.975 -0.077 -7.752 -8.032 -8.427 -2.814 -2.402 -2.884 1.807 -2.716 -3.685 1.463 -3.053 -2.955 2.043 -3.443 -0.312 1.095 -2.994 0.320 -1.893 ML 61 59 6 64 6 1 1 33 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 1 36 57 -7.509 -1.659 -2.147 -6.216 -1.350 -4.430 -0.061 -0.966 0.824 -0.399 D 63 59 6 64 6 0 0 31 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 1 37 57 -3.008 -1.471 -1.189 -4.926 -5.702 -5.363 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 1 36 57 -1.290 -0.883 -6.995 -5.163 -6.269 0.000 0.000 0.000 0.000 [ MATP 51 ] 62 82 c g - - MP 66 65 6 70 6 2 2 31 50 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -3.005 -2.884 -3.062 0.735 -2.433 -3.825 2.257 -2.985 -3.072 1.448 -3.567 -0.890 1.775 -3.220 0.627 -2.004 ML 67 65 6 70 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 30 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 28 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 1 31 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 63 81 c g - - MP 72 71 6 76 4 2 2 29 48 -1.628 -8.072 -0.887 -2.923 -3.071 -2.912 -3.106 0.687 -2.472 -3.839 2.282 -3.027 -3.129 1.604 -3.605 -0.911 1.321 -3.268 1.122 -2.056 ML 73 71 6 76 4 1 1 28 47 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 4 1 1 27 46 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 75 71 6 76 4 0 0 25 44 -12.737 -14.007 -2.036 -0.404 IL 76 76 5 76 4 1 1 29 47 -1.801 -1.789 -1.447 -4.137 0.000 0.000 0.000 0.000 IR 77 77 6 77 3 1 1 27 45 -2.644 -0.777 -1.964 0.000 0.000 0.000 0.000 [ MATR 53 ] - 79 - a - - MR 78 77 6 80 5 1 1 26 44 -6.765 -0.049 -6.581 -6.793 -7.685 0.335 -0.233 -0.067 -0.099 D 79 77 6 80 5 0 0 25 43 -6.281 -0.328 -3.907 -5.338 -3.333 IR 80 80 3 80 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 54 ] 67 78 g c - - MP 81 80 3 85 6 2 2 25 43 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -3.078 -2.461 -3.126 1.074 -3.033 -3.879 1.787 -3.311 -3.200 2.375 -3.654 0.595 0.919 -3.194 -0.692 -2.090 ML 82 80 3 85 6 1 1 24 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 3 85 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 3 85 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 55 ] 68 77 c g - - MP 87 86 6 91 6 2 2 23 41 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -3.365 -2.899 -3.353 0.746 -2.798 -4.052 2.365 -3.293 -3.386 2.204 -3.826 -0.720 1.083 -3.490 -0.439 -2.258 ML 88 86 6 91 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 23 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 69 76 c g - - MP 93 92 6 97 4 2 2 21 39 -6.907 -7.114 -0.055 -5.528 -3.116 -2.768 -3.163 1.281 -2.670 -3.951 2.387 -3.137 -3.178 1.723 -3.665 -0.630 1.242 -3.310 -0.338 -2.080 ML 94 92 6 97 4 1 1 22 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 96 92 6 97 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 97 97 5 97 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 98 98 6 98 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 70 - g - - - ML 99 98 6 101 3 1 1 17 35 -2.414 -0.319 -6.580 0.081 -0.638 0.642 -0.435 D 100 98 6 101 3 0 0 15 33 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 17 35 -1.943 -0.515 -4.643 0.000 0.000 0.000 0.000 [ MATL 58 ] 72 - A - - - ML 102 101 3 104 3 1 1 15 33 -7.926 -0.021 -6.580 1.183 -0.634 -1.175 -0.640 D 103 101 3 104 3 0 0 15 33 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 73 - A - - - ML 105 104 3 107 3 1 1 13 27 -2.414 -0.512 -3.167 1.702 -2.295 -1.935 -1.830 D 106 104 3 107 3 0 0 10 24 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 13 27 -1.943 -0.864 -2.392 0.000 0.000 0.000 0.000 [ MATL 60 ] 75 - u - - - ML 108 107 3 110 2 1 1 1 1 * 0.000 -0.247 -0.689 -0.250 0.763 D 109 107 3 110 2 0 0 0 0 * 0.000 IL 110 110 3 110 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 61 ] - - - - - - E 111 110 3 -1 0 0 0 0 0 [ BEGL 2 ] - - - - - - S 112 3 1 113 4 0 10 59 78 -0.045 -6.813 -6.220 -6.860 [ MATP 3 ] 1 45 c g - - MP 113 112 1 117 6 2 13 59 78 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -3.352 -3.104 -3.337 1.359 -2.580 -4.053 2.750 -3.158 -3.335 0.945 -3.787 -0.986 1.212 -3.554 -0.256 -2.233 ML 114 112 1 117 6 1 8 57 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 115 112 1 117 6 1 8 57 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 116 112 1 117 6 0 5 55 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 117 117 5 117 6 1 9 58 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 118 118 6 118 5 1 9 58 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 44 u a - - MP 119 118 6 123 6 2 12 57 76 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -2.517 -2.532 -2.632 0.754 -2.291 -3.418 1.613 -2.761 -2.682 1.027 -3.201 -0.814 2.428 -0.181 -0.209 -1.737 ML 120 118 6 123 6 1 8 55 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 121 118 6 123 6 1 8 55 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 122 118 6 123 6 0 4 53 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 123 123 5 123 6 1 8 56 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 124 124 6 124 5 1 9 56 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 43 u a - - MP 125 124 6 129 6 2 12 55 74 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -2.613 -2.623 -2.711 0.694 -2.284 -3.481 1.681 -2.782 -2.748 0.897 0.002 -0.873 2.430 -2.886 -0.172 -1.796 ML 126 124 6 129 6 1 7 53 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 127 124 6 129 6 1 7 53 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 128 124 6 129 6 0 4 51 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 129 129 5 129 6 1 8 54 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 130 130 6 130 5 1 8 54 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 42 G C - - MP 131 130 6 135 6 2 11 53 72 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -4.672 -3.060 -4.764 0.247 -5.134 -4.666 -0.516 -5.002 -4.282 3.621 -4.624 -0.757 -0.903 -4.422 -2.549 -3.642 ML 132 130 6 135 6 1 7 51 71 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 133 130 6 135 6 1 7 51 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 134 130 6 135 6 0 4 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 135 135 5 135 6 1 8 52 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 136 136 6 136 5 1 8 52 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 41 C G - - MP 137 136 6 141 6 2 9 51 70 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -4.477 -4.376 -4.179 -0.615 -2.913 -4.600 3.528 -3.716 -4.226 -0.364 -4.494 -2.322 0.609 -4.551 -0.618 -3.068 ML 138 136 6 141 6 1 6 49 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 139 136 6 141 6 1 7 49 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 140 136 6 141 6 0 4 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 141 141 5 141 6 1 7 50 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 142 142 6 142 5 1 7 50 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 40 a u - - MP 143 142 6 147 4 2 7 49 68 -3.203 -8.072 -0.244 -4.526 -2.766 -2.624 -2.849 1.800 -2.429 -3.631 1.715 -2.906 -2.890 1.298 -3.393 -0.692 1.614 -2.993 0.694 -1.870 ML 144 142 6 147 4 1 5 48 67 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 145 142 6 147 4 1 6 47 67 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 146 142 6 147 4 0 4 46 65 -12.737 -14.007 -2.036 -0.404 IL 147 147 5 147 4 1 6 48 68 -1.800 -5.070 -0.758 -3.448 0.000 0.000 0.000 0.000 IR 148 148 6 148 3 1 6 48 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 39 - A - - MR 149 148 6 151 5 1 6 46 66 -7.060 -0.208 -6.876 -3.127 -7.980 1.702 -2.295 -1.935 -1.830 D 150 148 6 151 5 0 3 45 65 -5.352 -0.707 -2.978 -4.409 -2.404 IR 151 151 3 151 5 1 6 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 9 38 u a - - MP 152 151 3 156 4 2 7 45 65 -6.701 -6.908 -0.063 -5.322 -3.022 -2.741 -3.062 1.409 -2.530 -3.852 1.747 -3.015 -3.070 1.288 -3.556 -0.635 2.246 -3.256 -0.245 -2.004 ML 153 151 3 156 4 1 4 46 65 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 154 151 3 156 4 1 3 45 64 -5.538 -4.567 -2.434 -0.413 -0.279 0.763 -1.002 -0.030 D 155 151 3 156 4 0 2 44 64 -4.568 -4.250 -2.265 -0.520 IL 156 156 5 156 4 1 5 47 67 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 157 157 6 157 3 1 5 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 10 - u - - - ML 158 157 6 160 5 1 5 43 62 -6.897 -0.045 -6.712 -6.925 -7.816 0.227 -0.263 -0.315 0.255 D 159 157 6 160 5 0 2 42 61 -5.659 -0.440 -4.921 -3.296 -3.208 IL 160 160 3 160 5 1 4 43 62 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 11 37 G C - - MP 161 160 3 165 6 2 6 42 61 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -4.672 -3.060 -4.764 0.247 -5.134 -4.666 -0.516 -5.002 -4.282 3.621 -4.624 -0.757 -0.903 -4.422 -2.549 -3.642 ML 162 160 3 165 6 1 2 40 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 163 160 3 165 6 1 3 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 164 160 3 165 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 165 165 5 165 6 1 3 41 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 166 166 6 166 5 1 3 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 12 36 C G - - MP 167 166 6 171 4 2 4 40 59 -6.827 -8.072 -0.083 -4.526 -4.477 -4.376 -4.179 -0.615 -2.913 -4.600 3.528 -3.716 -4.226 -0.364 -4.494 -2.322 0.609 -4.551 -0.618 -3.068 ML 168 166 6 171 4 1 2 39 58 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 169 166 6 171 4 1 2 39 58 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 170 166 6 171 4 0 0 37 56 -12.737 -14.007 -2.036 -0.404 IL 171 171 5 171 4 1 2 39 58 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 172 172 6 172 3 1 3 39 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 35 - G - - MR 173 172 6 175 3 1 3 38 57 -8.319 -0.019 -6.637 -1.500 -2.707 1.704 -2.093 D 174 172 6 175 3 0 0 36 55 -6.390 -1.568 -0.620 IR 175 175 3 175 3 1 2 38 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 34 - A - - MR 176 175 3 178 3 1 2 37 56 -8.319 -0.019 -6.637 1.073 -0.425 -1.123 -0.530 D 177 175 3 178 3 0 0 35 54 -6.390 -1.568 -0.620 IR 178 178 3 178 3 1 2 37 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 33 - A - - MR 179 178 3 181 2 1 1 36 55 -8.311 -0.005 1.052 -1.049 -1.111 -0.028 D 180 178 3 181 2 0 0 35 54 -4.432 -0.068 IR 181 181 3 181 2 1 1 37 56 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 17 ] - - - - - - B 182 181 3 183 203 0 0 35 54 [ BEGL 18 ] - - - - - - S 183 182 1 184 4 0 0 20 38 -0.045 -6.813 -6.220 -6.860 [ MATP 19 ] 13 18 g c - - MP 184 183 1 188 4 2 2 20 38 -6.907 -7.114 -0.055 -5.528 -3.589 -2.726 -3.556 0.841 -3.404 -4.147 1.533 -3.702 -3.618 2.932 -4.011 -0.468 0.582 -3.572 -0.976 -2.485 ML 185 183 1 188 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 186 183 1 188 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 187 183 1 188 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 188 188 5 188 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 189 189 6 189 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 14 - G - - - ML 190 189 6 192 3 1 1 16 35 -7.926 -0.021 -6.580 -1.500 -2.707 1.704 -2.093 D 191 189 6 192 3 0 0 16 34 -6.174 -1.687 -0.566 IL 192 192 3 192 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 15 - U - - - ML 193 192 3 195 3 1 1 15 33 -7.926 -0.021 -6.580 -1.416 -1.425 -2.146 1.598 D 194 192 3 195 3 0 0 15 33 -6.174 -1.687 -0.566 IL 195 195 3 195 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 16 - G - - - ML 196 195 3 198 3 1 1 13 32 -7.926 -0.021 -6.580 -1.500 -2.707 1.704 -2.093 D 197 195 3 198 3 0 0 13 32 -6.174 -1.687 -0.566 IL 198 198 3 198 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 17 - A - - - ML 199 198 3 201 2 1 1 1 1 * 0.000 1.702 -2.295 -1.935 -1.830 D 200 198 3 201 2 0 0 0 0 * 0.000 IL 201 201 3 201 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 24 ] - - - - - - E 202 201 3 -1 0 0 0 0 0 [ BEGR 25 ] - - - - - - S 203 182 1 204 5 0 0 28 46 -7.060 -0.040 -6.876 -7.088 -7.980 IL 204 204 2 204 5 1 1 29 48 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 19 32 C G - - MP 205 204 2 209 6 2 2 28 46 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -4.477 -4.376 -4.179 -0.615 -2.913 -4.600 3.528 -3.716 -4.226 -0.364 -4.494 -2.322 0.609 -4.551 -0.618 -3.068 ML 206 204 2 209 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 207 204 2 209 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 208 204 2 209 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 209 209 5 209 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 210 210 6 210 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 20 31 G C - - MP 211 210 6 215 6 2 2 26 44 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -4.672 -3.060 -4.764 0.247 -5.134 -4.666 -0.516 -5.002 -4.282 3.621 -4.624 -0.757 -0.903 -4.422 -2.549 -3.642 ML 212 210 6 215 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 213 210 6 215 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 214 210 6 215 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 215 215 5 215 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 216 216 6 216 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 21 30 G C - - MP 217 216 6 221 6 2 2 24 42 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -4.672 -3.060 -4.764 0.247 -5.134 -4.666 -0.516 -5.002 -4.282 3.621 -4.624 -0.757 -0.903 -4.422 -2.549 -3.642 ML 218 216 6 221 6 1 1 23 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 219 216 6 221 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 220 216 6 221 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 221 221 5 221 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 222 222 6 222 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 22 29 C G - - MP 223 222 6 227 6 2 2 22 40 -9.092 -9.031 -0.021 -7.808 -8.088 -8.483 -3.802 -3.724 -3.632 0.030 -2.505 -4.158 3.048 -3.239 -3.650 0.294 -4.011 -1.694 1.740 -3.915 -0.177 -2.507 ML 224 222 6 227 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 225 222 6 227 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 226 222 6 227 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 227 227 5 227 6 1 1 22 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 228 228 6 228 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 23 28 g c - - MP 229 228 6 233 4 2 2 20 38 -6.907 -7.114 -0.055 -5.528 -2.481 -2.257 -2.594 1.067 -2.474 -3.367 1.848 -2.834 -2.675 2.107 -3.176 -0.378 1.122 -0.455 -0.368 -1.697 ML 230 228 6 233 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 231 228 6 233 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 232 228 6 233 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 233 233 5 233 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 234 234 6 234 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 24 - A - - - ML 235 234 6 237 3 1 1 16 35 -7.926 -0.021 -6.580 1.702 -2.295 -1.935 -1.830 D 236 234 6 237 3 0 0 16 34 -6.174 -1.687 -0.566 IL 237 237 3 237 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 25 - a - - - ML 238 237 3 240 3 1 1 15 33 -7.926 -0.021 -6.580 0.740 -0.399 -0.979 0.090 D 239 237 3 240 3 0 0 15 33 -6.174 -1.687 -0.566 IL 240 240 3 240 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 26 - u - - - ML 241 240 3 243 3 1 1 13 32 -7.926 -0.021 -6.580 0.071 -0.854 0.211 0.309 D 242 240 3 243 3 0 0 13 32 -6.174 -1.687 -0.566 IL 243 243 3 243 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 27 - a - - - ML 244 243 3 246 2 1 1 1 1 * 0.000 0.423 0.041 -0.997 0.175 D 245 243 3 246 2 0 0 0 0 * 0.000 IL 246 246 3 246 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 35 ] - - - - - - E 247 246 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME Cupriavidus-1 ACC RF02949 DESC Cupriavidus-1 RNA LENG 78 MAXL 161 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 21:06:49 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02949/CM NSEQ 5 EFFN 4.311523 CKSUM 1023757911 STATS LOCAL MSV -8.4117 0.71903 STATS LOCAL VITERBI -9.5262 0.71903 STATS LOCAL FORWARD -3.5436 0.71903 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.55121 1.29660 1.10581 1.69497 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 0.00000 * 1 1.61853 0.57987 2.39115 1.89503 1 C - - ( 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 2 2.61637 1.78559 2.42053 0.39994 2 U - - ( 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 3 2.77981 1.84495 1.53711 0.57108 3 U - - ( 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 4 3.08747 3.97201 0.08813 3.91663 4 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 5 4.00104 0.10757 3.86551 2.76882 5 C - - ( 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 6 1.15315 1.67931 1.96831 1.02676 6 u - - ( 1.38629 1.38629 1.38629 1.38629 0.41260 1.87319 1.69044 0.75884 0.63150 1.09861 0.40547 7 1.55451 1.68456 1.95058 0.77439 9 u - - ( 1.38629 1.38629 1.38629 1.38629 0.03518 4.05783 4.05783 1.46634 0.26236 2.69843 0.06968 8 1.23591 1.54985 1.57926 1.23436 10 u - - - 1.38629 1.38629 1.38629 1.38629 0.03518 4.05783 4.05783 1.46634 0.26236 0.14459 2.00528 9 3.07978 3.96041 0.08910 3.90098 11 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 10 3.98627 0.10827 3.85709 2.76591 12 C - - ( 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 11 2.32993 1.68571 0.46324 2.42878 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 12 3.43223 4.39154 0.06620 3.94454 14 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 13 3.33646 3.18424 3.87436 0.10285 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 14 3.43223 4.39154 0.06620 3.94454 16 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 15 0.06978 3.99300 3.65222 3.77141 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 16 2.67143 0.51020 1.59956 2.05195 18 C - - > 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 17 4.04898 0.10536 3.89248 2.77801 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 18 3.09715 3.98664 0.08693 3.93649 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 19 3.09320 3.98066 0.08742 3.92836 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 20 3.12917 0.43902 2.91189 1.35788 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 21 2.03625 1.28436 1.05624 1.40693 23 g - - < 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 22 0.06978 3.99300 3.65222 3.77141 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 23 0.75020 1.68814 2.33397 1.40262 25 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 24 1.40735 2.21368 1.10588 1.15521 26 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 25 1.04149 1.25153 2.33238 1.33204 27 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 26 2.01938 0.92727 1.17773 1.81002 28 c - - > 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 27 1.49306 3.07738 0.39549 2.88449 29 G - - > 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 28 4.09421 0.10579 3.83949 2.77713 30 C - - > 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 29 4.10948 0.10514 3.84710 2.77985 31 C - - > 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 30 3.07063 4.06335 0.08945 3.81743 32 G - - > 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 31 0.49521 2.47042 2.54259 1.48128 33 A - - , 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 32 0.45885 1.67923 2.62218 2.21800 34 A - - , 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 33 3.43223 4.39154 0.06620 3.94454 35 G - - , 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 34 3.02392 3.98509 0.09558 3.73179 36 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 35 3.94212 0.11286 3.76049 2.74813 37 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 36 0.97219 1.62998 1.62884 1.47117 38 a - - ) 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 37 0.06978 3.99300 3.65222 3.77141 39 A - - - 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 38 1.49598 2.13455 1.14983 1.07592 40 u - - ) 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 39 3.04769 4.02460 0.09242 3.77495 41 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 40 4.06074 0.10725 3.82260 2.77105 42 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 41 0.62972 2.78202 1.11759 2.54743 43 A - - ) 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 42 0.67547 1.60191 1.61655 2.39701 44 A - - ) 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 43 2.14205 2.57736 0.53048 1.52193 45 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 44 0.82008 2.25854 1.50423 1.45710 46 a - - - 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 45 2.66397 0.38763 3.29202 1.53949 47 C - - - 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 46 2.16805 1.81093 0.46578 2.35964 48 G - - - 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 47 2.34238 0.81415 2.94080 0.89633 49 c - - - 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 48 3.43223 4.39154 0.06620 3.94454 50 G - - - 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 49 3.33646 3.18424 3.87436 0.10285 51 U - - - 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 50 0.06978 3.99300 3.65222 3.77141 52 A - - - 1.38629 1.38629 1.38629 1.38629 0.31977 4.24427 1.34962 1.46634 0.26236 1.09861 0.40547 51 1.10664 0.93332 2.35666 1.70733 53 c - - - 1.38629 1.38629 1.38629 1.38629 0.03874 3.96324 3.96324 1.46634 0.26236 0.10493 2.30644 52 3.96748 0.10918 3.84630 2.76217 54 C - - < 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 53 2.46685 0.82903 1.10577 1.91244 55 c - - < 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 54 3.07743 3.95688 0.08940 3.89623 56 G - - < 1.38629 1.38629 1.38629 1.38629 0.16501 1.98221 4.24427 0.19665 1.72303 1.09861 0.40547 55 2.00420 1.72872 0.54357 2.23445 58 G - - < 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 56 1.76739 0.76974 2.24362 1.34702 59 c - - < 1.38629 1.38629 1.38629 1.38629 0.17281 4.24427 1.93547 1.46634 0.26236 1.09861 0.40547 57 1.17853 1.92638 1.12282 1.50855 60 g - - < 1.38629 1.38629 1.38629 1.38629 0.18962 1.85641 4.10500 0.19918 1.71149 0.18129 1.79695 58 2.26558 1.08952 1.61519 1.01888 62 u - - < 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 59 2.43982 1.04074 1.49457 1.09277 63 c - - < 1.38629 1.38629 1.38629 1.38629 0.63127 0.79024 4.24427 0.49741 0.93676 1.09861 0.40547 60 2.02191 1.39962 0.71821 2.01527 67 g - - < 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 61 2.43134 0.88552 1.03674 1.93123 68 c - - < 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 62 1.73392 0.88633 1.47090 1.70635 69 c - - < 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 63 1.46871 1.89665 0.70865 2.06044 70 g - - _ 1.38629 1.38629 1.38629 1.38629 0.33146 1.31760 4.24427 0.10391 2.31577 1.09861 0.40547 64 0.37884 1.88795 2.69334 2.34017 72 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 65 0.06978 3.99300 3.65222 3.77141 73 A - - _ 1.38629 1.38629 1.38629 1.38629 0.34446 1.98221 1.87319 0.19665 1.72303 1.09861 0.40547 66 1.80006 2.10071 1.55990 0.68879 75 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03390 4.09428 4.09428 1.46634 0.26236 0.17123 1.84916 67 1.93688 1.58788 0.80847 1.58012 76 g - - > 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 68 2.18034 1.09684 0.81879 2.18829 77 g - - > 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 69 2.26014 0.98607 1.30532 1.38017 78 c - - > 1.38629 1.38629 1.38629 1.38629 0.16501 4.24427 1.98221 1.46634 0.26236 1.09861 0.40547 70 1.15398 1.50330 1.33742 1.61090 79 a - - - 1.38629 1.38629 1.38629 1.38629 0.19973 1.80374 4.11255 0.18813 1.76322 0.18919 1.75811 71 1.94447 1.57906 0.61629 2.19980 81 G - - > 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 72 1.38107 1.72707 0.82293 2.02692 82 g - - > 1.38629 1.38629 1.38629 1.38629 0.32889 1.32451 4.24427 0.95908 0.48329 1.09861 0.40547 73 2.07427 1.29322 1.30957 1.10857 87 u - - > 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 74 1.93983 2.41498 0.55336 1.65084 88 G - - > 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 75 2.47094 0.73759 1.62509 1.42572 89 c - - > 1.38629 1.38629 1.38629 1.38629 0.16501 1.98221 4.24427 0.19665 1.72303 1.09861 0.40547 76 3.99309 0.11037 3.78761 2.75825 91 C - - > 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 77 2.14942 1.17116 0.76876 2.20859 92 g - - > 1.38629 1.38629 1.38629 1.38629 0.02911 4.24427 4.24427 1.46634 0.26236 1.09861 0.40547 78 2.98825 3.92691 0.10048 3.66852 93 G - - > 1.38629 1.38629 1.38629 1.38629 0.01466 4.22982 * 1.46634 0.26236 0.00000 * //