INFERNAL1/a [1.1.5 | Sep 2023] NAME Corio-PBP ACC RF02945 DESC Corio-PBP RNA STATES 231 NODES 56 CLEN 74 W 109 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 13:00:02 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02945/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 14 EFFN 1.261230 CKSUM 1331726091 NULL 0.000 0.000 0.000 0.000 GA 63.50 TC 64.10 NC 37.00 EFP7GF -7.6049 0.71900 ECMLC 0.62559 -6.33540 3.06345 1600000 429277 0.002795 ECMGC 0.42175 -15.85313 -3.11238 1600000 86242 0.004638 ECMLI 0.59384 -4.74393 4.52354 1600000 294620 0.004073 ECMGI 0.45039 -10.59512 0.50202 1600000 59248 0.006751 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 109 157 -6.588 -7.833 -0.099 -4.287 IL 1 1 2 1 4 1 28 110 159 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 2 29 110 159 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 97 - G - - MR 3 2 3 5 3 2 29 109 158 -8.095 -0.022 -6.413 -0.987 -2.103 1.539 -1.488 D 4 2 3 5 3 0 24 107 155 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 28 109 158 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 96 - G - - MR 6 5 3 8 3 2 28 108 157 -8.095 -0.022 -6.413 -0.410 -1.693 1.302 -1.083 D 7 5 3 8 3 0 23 106 154 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 28 108 157 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 95 - A - - MR 9 8 3 11 3 2 28 107 156 -8.095 -0.022 -6.413 1.566 -1.819 -1.506 -1.312 D 10 8 3 11 3 0 22 105 153 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 27 107 156 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 94 - A - - MR 12 11 3 14 3 2 27 106 155 -8.095 -0.022 -6.413 1.566 -1.819 -1.506 -1.312 D 13 11 3 14 3 0 21 104 153 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 26 106 155 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 93 - G - - MR 15 14 3 17 3 1 26 105 154 -8.095 -0.022 -6.413 -0.443 -1.716 1.319 -1.106 D 16 14 3 17 3 0 21 103 152 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 25 105 154 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 92 - G - - MR 18 17 3 20 5 1 26 104 153 -6.853 -0.046 -6.668 -6.880 -7.772 -0.182 -1.540 1.170 -0.932 D 19 17 3 20 5 0 20 102 151 -5.352 -0.707 -2.978 -4.409 -2.404 IR 20 20 3 20 5 1 24 104 153 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 1 91 G C - - MP 21 20 3 25 6 2 26 103 152 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -4.202 -2.841 -4.267 0.546 -4.472 -4.470 0.035 -4.459 -3.953 3.476 -4.332 -0.527 -0.368 -4.108 -1.977 -3.152 ML 22 20 3 25 6 1 21 101 150 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 3 25 6 1 21 101 149 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 3 25 6 0 17 97 146 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 23 102 151 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 23 102 151 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 2 90 c g - - MP 27 26 6 31 6 2 24 101 150 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -3.297 -3.213 -3.231 0.449 -2.312 -3.849 2.545 -2.979 -3.252 0.761 -3.668 -1.230 2.059 -3.456 0.375 -2.149 ML 28 26 6 31 6 1 20 99 148 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 20 99 148 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 16 96 144 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 22 100 149 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 22 100 149 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 3 89 g c - - MP 33 32 6 37 6 2 22 99 148 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -3.339 -2.403 -3.388 1.886 -3.648 -4.216 0.713 -3.615 -3.359 2.790 -3.826 -0.051 0.381 -3.523 -1.246 -2.295 ML 34 32 6 37 6 1 19 97 146 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 1 19 97 146 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 16 94 143 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 1 21 98 147 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 1 21 98 147 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 4 88 c g - - MP 39 38 6 43 6 2 21 97 146 -8.999 -8.938 -0.039 -7.715 -7.995 -6.144 -3.393 -3.212 -3.320 0.725 -2.421 -3.946 2.860 -3.070 -3.337 0.851 -3.747 -1.151 1.461 -3.550 -0.102 -2.221 ML 40 38 6 43 6 1 18 96 144 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 18 95 144 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 16 93 142 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 19 96 145 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 19 96 145 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 5 87 g c - - MP 45 44 6 49 4 2 19 95 144 -6.544 -7.789 -0.253 -2.778 -1.977 -1.940 -0.639 1.315 -2.107 -2.963 1.458 -1.341 -2.211 1.923 -2.753 -0.242 1.236 -2.252 -0.176 -1.314 ML 46 44 6 49 4 1 16 94 143 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 4 1 17 94 143 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 48 44 6 49 4 0 15 93 141 -13.602 -14.872 -0.774 -1.268 IL 49 49 5 49 4 1 18 94 143 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 50 50 6 50 3 1 19 95 143 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 86 - u - - MR 51 50 6 53 5 1 18 93 142 -6.736 -0.050 -6.552 -6.764 -7.655 -0.139 -0.466 -0.168 0.564 D 52 50 6 53 5 0 14 92 140 -5.762 -0.497 -3.388 -4.819 -2.813 IR 53 53 3 53 5 1 17 93 142 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 6 85 C G - - MP 54 53 3 58 6 2 18 92 141 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -4.008 -3.857 -3.784 -0.147 -2.635 -4.265 3.339 -3.388 -3.820 0.191 -4.134 -1.799 0.926 -4.109 -0.334 -2.681 ML 55 53 3 58 6 1 14 91 139 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 3 58 6 1 13 90 139 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 3 58 6 0 10 88 137 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 16 92 140 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 15 91 140 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 7 84 G C - - MP 60 59 6 64 4 2 16 90 139 -6.644 -6.851 -0.066 -5.265 -3.941 -2.681 -4.005 0.757 -4.395 -4.402 0.102 -4.276 -3.802 3.371 -4.206 0.012 -0.222 -3.916 -1.893 -2.903 ML 61 59 6 64 4 1 13 89 138 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 4 1 11 89 137 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 63 59 6 64 4 0 10 88 136 -4.568 -4.250 -2.265 -0.520 IL 64 64 5 64 4 1 15 90 139 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 65 65 6 65 3 1 14 90 139 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 8 - u - - - ML 66 65 6 68 3 1 14 88 137 -8.095 -0.022 -6.413 -0.241 -0.754 0.042 0.615 D 67 65 6 68 3 0 10 87 135 -5.620 -0.734 -1.403 IL 68 68 3 68 3 1 13 89 137 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 83 - G - - MR 69 68 3 71 5 1 14 87 136 -6.853 -0.046 -6.668 -6.880 -7.772 -0.987 -2.103 1.539 -1.488 D 70 68 3 71 5 0 8 85 134 -5.352 -0.707 -2.978 -4.409 -2.404 IR 71 71 3 71 5 1 12 87 136 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 9 82 a u - - MP 72 71 3 76 6 2 13 86 135 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -3.377 -2.523 -3.419 2.968 -3.555 -4.590 0.722 -3.483 -3.334 1.533 -3.860 -0.076 0.300 -3.845 -1.223 -2.283 ML 73 71 3 76 6 1 9 84 133 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 3 76 6 1 9 84 133 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 3 76 6 0 6 81 129 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 11 85 134 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 11 85 134 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 10 81 a u - - MP 78 77 6 82 6 2 11 84 133 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -3.152 -2.312 -3.240 2.709 -3.573 -4.407 0.654 -3.407 -3.164 1.771 -3.702 0.706 0.354 -3.588 -1.258 -2.125 ML 79 77 6 82 6 1 9 82 131 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 8 82 131 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 5 79 128 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 10 84 132 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 10 83 132 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 11 80 C G - - MP 84 83 6 88 6 2 9 82 131 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -4.008 -3.857 -3.784 -0.147 -2.635 -4.265 3.339 -3.388 -3.820 0.191 -4.134 -1.799 0.926 -4.109 -0.334 -2.681 ML 85 83 6 88 6 1 8 81 129 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 7 80 129 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 5 78 127 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 8 82 130 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 8 81 130 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 12 79 u g - - MP 90 89 6 94 4 2 8 80 129 -4.660 -6.851 -0.111 -5.265 -3.554 -3.448 -3.376 0.162 -2.318 -3.893 1.951 -3.032 -3.412 0.456 -3.762 -1.465 1.187 -3.687 2.559 -2.312 ML 91 89 6 94 4 1 6 79 128 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 4 1 6 79 128 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 93 89 6 94 4 0 5 78 126 -4.568 -4.250 -2.265 -0.520 IL 94 94 5 94 4 1 7 80 129 -1.830 -2.513 -0.965 -4.998 0.000 0.000 0.000 0.000 IR 95 95 6 95 3 1 7 80 129 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 14 - U - - - ML 96 95 6 98 2 1 6 78 127 -8.014 -0.006 -0.990 -1.078 -1.692 1.440 D 97 95 6 98 2 0 5 77 126 -8.445 -0.004 IL 98 98 3 98 2 1 6 79 127 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 22 ] - - - - - - B 99 98 3 100 162 0 5 77 126 [ BEGL 23 ] - - - - - - S 100 99 1 101 4 0 0 55 104 -0.049 -6.688 -6.095 -6.735 [ MATP 24 ] 15 53 u g - - MP 101 100 1 105 6 2 2 55 104 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -3.554 -3.448 -3.376 0.162 -2.318 -3.893 1.951 -3.032 -3.412 0.456 -3.762 -1.465 1.187 -3.687 2.559 -2.312 ML 102 100 1 105 6 1 1 54 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 103 100 1 105 6 1 1 53 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 104 100 1 105 6 0 0 51 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 105 105 5 105 6 1 1 54 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 106 106 6 106 5 1 1 54 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 16 52 C G - - MP 107 106 6 111 4 2 2 53 102 -6.644 -6.851 -0.066 -5.265 -4.008 -3.857 -3.784 -0.147 -2.635 -4.265 3.339 -3.388 -3.820 0.191 -4.134 -1.799 0.926 -4.109 -0.334 -2.681 ML 108 106 6 111 4 1 1 52 101 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 109 106 6 111 4 1 1 51 100 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 110 106 6 111 4 0 0 50 99 -4.568 -4.250 -2.265 -0.520 IL 111 111 5 111 4 1 1 53 102 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 112 112 6 112 3 1 1 53 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 17 - u - - - ML 113 112 6 115 3 1 1 51 100 -7.685 -0.025 -6.339 0.211 -0.698 -0.978 0.781 D 114 112 6 115 3 0 0 49 98 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 1 52 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 18 - C - - - ML 116 115 3 118 3 1 1 50 99 -8.095 -0.022 -6.413 -1.092 1.389 -1.884 -0.641 D 117 115 3 118 3 0 0 49 97 -5.620 -0.734 -1.403 IL 118 118 3 118 3 1 1 50 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 51 - A - - MR 119 118 3 121 3 1 1 49 98 -8.095 -0.022 -6.413 1.566 -1.819 -1.506 -1.312 D 120 118 3 121 3 0 0 47 96 -6.390 -1.568 -0.620 IR 121 121 3 121 3 1 1 49 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 50 - A - - MR 122 121 3 124 5 1 1 48 97 -6.853 -0.046 -6.668 -6.880 -7.772 1.566 -1.819 -1.506 -1.312 D 123 121 3 124 5 0 0 46 95 -5.352 -0.707 -2.978 -4.409 -2.404 IR 124 124 3 124 5 1 1 48 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 19 49 G C - - MP 125 124 3 129 6 2 2 47 96 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -4.202 -2.841 -4.267 0.546 -4.472 -4.470 0.035 -4.459 -3.953 3.476 -4.332 -0.527 -0.368 -4.108 -1.977 -3.152 ML 126 124 3 129 6 1 1 46 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 127 124 3 129 6 1 1 46 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 128 124 3 129 6 0 0 43 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 129 129 5 129 6 1 1 46 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 130 130 6 130 5 1 1 46 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 20 48 C G - - MP 131 130 6 135 6 2 2 45 94 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -4.008 -3.857 -3.784 -0.147 -2.635 -4.265 3.339 -3.388 -3.820 0.191 -4.134 -1.799 0.926 -4.109 -0.334 -2.681 ML 132 130 6 135 6 1 1 45 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 133 130 6 135 6 1 1 44 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 134 130 6 135 6 0 0 42 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 135 135 5 135 6 1 1 45 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 136 136 6 136 5 1 1 44 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 21 47 a u - - MP 137 136 6 141 4 2 2 43 92 -6.644 -4.471 -0.122 -5.265 -3.377 -2.523 -3.419 2.968 -3.555 -4.590 0.722 -3.483 -3.334 1.533 -3.860 -0.076 0.300 -3.845 -1.223 -2.283 ML 138 136 6 141 4 1 1 44 93 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 139 136 6 141 4 1 1 44 92 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 140 136 6 141 4 0 0 42 91 -4.568 -4.250 -2.265 -0.520 IL 141 141 5 141 4 1 1 47 96 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 142 142 6 142 3 1 1 49 98 -0.546 -1.790 -5.285 0.000 0.000 0.000 0.000 [ MATL 33 ] 22 - U - - - ML 143 142 6 145 3 1 1 19 38 -7.685 -0.025 -6.339 -0.990 -1.078 -1.692 1.440 D 144 142 6 145 3 0 0 18 37 -6.174 -1.687 -0.566 IL 145 145 3 145 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 23 - U - - - ML 146 145 3 148 3 1 1 18 36 -7.685 -0.025 -6.339 -0.722 -0.613 -1.437 1.245 D 147 145 3 148 3 0 0 17 36 -6.174 -1.687 -0.566 IL 148 148 3 148 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 24 - a - - - ML 149 148 3 151 3 1 1 16 35 -7.685 -0.025 -6.339 0.648 -0.153 -0.632 -0.172 D 150 148 3 151 3 0 0 16 34 -6.174 -1.687 -0.566 IL 151 151 3 151 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 25 - A - - - ML 152 151 3 154 3 1 1 15 33 -7.685 -0.025 -6.339 1.189 -1.292 -0.486 -0.744 D 153 151 3 154 3 0 0 15 33 -6.174 -1.687 -0.566 IL 154 154 3 154 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 26 - G - - - ML 155 154 3 157 3 1 1 13 32 -7.685 -0.025 -6.339 -0.987 -2.103 1.539 -1.488 D 156 154 3 157 3 0 0 13 32 -6.174 -1.687 -0.566 IL 157 157 3 157 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 27 - U - - - ML 158 157 3 160 2 1 1 1 1 * 0.000 -0.990 -1.078 -1.692 1.440 D 159 157 3 160 2 0 0 0 0 * 0.000 IL 160 160 3 160 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 39 ] - - - - - - E 161 160 3 -1 0 0 0 0 0 [ BEGR 40 ] - - - - - - S 162 99 1 163 3 0 0 38 57 -7.685 -0.064 -4.707 IL 163 163 2 163 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 54 - G - - - ML 164 163 2 166 5 1 1 38 57 -6.820 -0.047 -6.636 -6.848 -7.740 -0.909 -2.010 1.505 -1.395 D 165 163 2 166 5 0 0 36 56 -5.112 -0.700 -4.373 -2.748 -2.660 IL 166 166 3 166 5 1 1 38 58 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 55 78 g c - - MP 167 166 3 171 6 2 2 37 56 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -3.479 -2.468 -3.522 1.620 -3.807 -4.252 0.596 -3.764 -3.474 2.988 -3.922 -0.122 0.261 -3.604 -1.375 -2.428 ML 168 166 3 171 6 1 1 35 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 169 166 3 171 6 1 1 35 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 170 166 3 171 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 171 171 5 171 6 1 1 36 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 172 172 6 172 5 1 1 36 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 56 77 G C - - MP 173 172 6 177 6 2 2 35 54 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -3.696 -1.380 -3.744 0.849 -4.125 -4.197 0.250 -4.085 -3.665 3.300 -4.064 -0.308 -0.051 -3.656 -1.692 -2.706 ML 174 172 6 177 6 1 1 33 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 175 172 6 177 6 1 1 33 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 176 172 6 177 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 177 177 5 177 6 1 1 34 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 178 178 6 178 5 1 1 34 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 57 76 a u - - MP 179 178 6 183 6 2 2 33 52 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -3.204 -2.356 -3.286 2.806 -3.612 -4.475 0.629 -3.438 -3.206 1.720 -3.747 0.481 0.320 -3.654 -1.290 -2.165 ML 180 178 6 183 6 1 1 31 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 181 178 6 183 6 1 1 31 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 182 178 6 183 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 183 183 5 183 6 1 1 32 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 184 184 6 184 5 1 1 32 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 58 75 G C - - MP 185 184 6 189 6 2 2 31 50 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -4.202 -2.841 -4.267 0.546 -4.472 -4.470 0.035 -4.459 -3.953 3.476 -4.332 -0.527 -0.368 -4.108 -1.977 -3.152 ML 186 184 6 189 6 1 1 29 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 187 184 6 189 6 1 1 29 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 188 184 6 189 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 189 189 5 189 6 1 1 30 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 190 190 6 190 5 1 1 30 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 59 74 G C - - MP 191 190 6 195 6 2 2 29 48 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -4.202 -2.841 -4.267 0.546 -4.472 -4.470 0.035 -4.459 -3.953 3.476 -4.332 -0.527 -0.368 -4.108 -1.977 -3.152 ML 192 190 6 195 6 1 1 27 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 193 190 6 195 6 1 1 27 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 194 190 6 195 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 195 195 5 195 6 1 1 28 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 196 196 6 196 5 1 1 28 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 60 73 G C - - MP 197 196 6 201 6 2 2 27 46 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -4.202 -2.841 -4.267 0.546 -4.472 -4.470 0.035 -4.459 -3.953 3.476 -4.332 -0.527 -0.368 -4.108 -1.977 -3.152 ML 198 196 6 201 6 1 1 25 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 199 196 6 201 6 1 1 25 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 200 196 6 201 6 0 0 23 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 201 201 5 201 6 1 1 26 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 202 202 6 202 5 1 1 26 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 61 72 G C - - MP 203 202 6 207 6 2 2 25 44 -8.999 -8.938 -0.023 -7.715 -7.995 -8.390 -4.202 -2.841 -4.267 0.546 -4.472 -4.470 0.035 -4.459 -3.953 3.476 -4.332 -0.527 -0.368 -4.108 -1.977 -3.152 ML 204 202 6 207 6 1 1 24 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 205 202 6 207 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 206 202 6 207 6 0 0 22 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 207 207 5 207 6 1 1 24 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 208 208 6 208 5 1 1 24 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 62 71 g c - - MP 209 208 6 213 4 2 2 23 42 -6.644 -6.851 -0.066 -5.265 -3.226 -2.355 -3.287 2.211 -3.518 -4.226 0.798 -3.483 -3.251 2.503 -3.744 0.012 0.464 -3.492 -1.150 -2.188 ML 210 208 6 213 4 1 1 23 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 211 208 6 213 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 212 208 6 213 4 0 0 21 41 -4.568 -4.250 -2.265 -0.520 IL 213 213 5 213 4 1 1 24 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 214 214 6 214 3 1 1 23 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 63 - A - - - ML 215 214 6 217 3 1 1 20 40 -7.685 -0.025 -6.339 1.566 -1.819 -1.506 -1.312 D 216 214 6 217 3 0 0 19 38 -6.174 -1.687 -0.566 IL 217 217 3 217 3 1 1 22 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 64 - U - - - ML 218 217 3 220 3 1 1 19 38 -3.367 -0.167 -6.339 -0.376 -0.794 -1.243 1.157 D 219 217 3 220 3 0 0 16 36 -6.174 -1.687 -0.566 IL 220 220 3 220 3 1 1 20 40 -1.377 -0.806 -4.536 0.000 0.000 0.000 0.000 [ MATL 52 ] 68 - G - - - ML 221 220 3 223 3 1 1 15 33 -7.685 -0.025 -6.339 -0.987 -2.103 1.539 -1.488 D 222 220 3 223 3 0 0 15 33 -6.174 -1.687 -0.566 IL 223 223 3 223 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 69 - G - - - ML 224 223 3 226 3 1 1 13 32 -7.685 -0.025 -6.339 -0.987 -2.103 1.539 -1.488 D 225 223 3 226 3 0 0 13 32 -6.174 -1.687 -0.566 IL 226 226 3 226 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 70 - G - - - ML 227 226 3 229 2 1 1 1 1 * 0.000 -0.987 -2.103 1.539 -1.488 D 228 226 3 229 2 0 0 0 0 * 0.000 IL 229 229 3 229 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 55 ] - - - - - - E 230 229 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME Corio-PBP ACC RF02945 DESC Corio-PBP RNA LENG 74 MAXL 285 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 13:00:02 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02945/CM NSEQ 14 EFFN 2.136230 CKSUM 1331726091 STATS LOCAL MSV -8.5978 0.71900 STATS LOCAL VITERBI -9.4405 0.71900 STATS LOCAL FORWARD -3.5587 0.71900 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.60257 1.44411 1.05488 1.53978 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 0.00000 * 1 2.51717 3.13188 0.18714 3.07151 1 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 2 2.39094 0.90069 2.14062 0.95559 2 c - - ( 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 3 1.25901 2.41980 0.63983 2.30517 3 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 4 2.15391 0.64437 2.09561 1.44401 4 C - - ( 1.38629 1.38629 1.38629 1.38629 0.08624 3.88134 2.78051 1.46634 0.26236 1.09861 0.40547 5 1.42754 1.56775 1.11422 1.49872 5 g - - ( 1.38629 1.38629 1.38629 1.38629 0.04398 3.83908 3.83908 1.46634 0.26236 0.50994 0.91762 6 3.02157 0.27593 2.82174 2.01812 6 C - - ( 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 7 2.28817 2.96679 0.23686 2.84767 7 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 8 1.67667 2.03705 1.30481 0.88827 8 u - - - 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 9 0.38682 2.64913 1.74487 2.58483 9 A - - ( 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 10 0.59622 2.59816 1.24580 2.44197 10 A - - ( 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 11 3.09327 0.26677 2.85530 2.03059 11 C - - ( 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 12 2.84763 1.52787 2.62545 0.42677 12 U - - ( 1.38629 1.38629 1.38629 1.38629 0.08096 2.86212 3.88134 0.61167 0.78186 1.09861 0.40547 13 2.51534 2.49553 3.02868 0.23783 14 U - - , 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 14 2.85673 1.52764 2.62948 0.42560 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 15 3.10052 0.26588 2.85863 2.03182 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 16 1.25534 1.99781 2.21416 0.75472 17 u - - - 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 17 2.72328 0.22796 3.29763 2.29052 18 C - - - 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 18 2.51887 3.13380 0.18673 3.07421 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 19 3.09353 0.26674 2.85542 2.03064 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 20 0.38628 2.65090 1.74513 2.58746 21 A - - < 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 21 2.51534 2.49553 3.02868 0.23783 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 22 2.17754 1.95621 2.68848 0.38964 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 23 0.87385 1.45467 1.89177 1.61758 24 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 24 0.45311 2.52550 1.77285 2.16734 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 25 2.59511 3.45804 0.16756 3.03347 26 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 26 2.51534 2.49553 3.02868 0.23783 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.09019 2.72382 3.88134 2.76234 0.06523 1.09861 0.40547 27 2.81885 2.02785 2.46484 0.32340 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 28 2.30989 3.02645 0.22974 2.85598 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 29 3.29879 0.21837 2.97480 2.22391 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 30 0.17305 3.13781 2.87192 2.83132 50 A - - - 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 31 0.17305 3.13781 2.87192 2.83132 51 A - - - 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 32 2.30416 3.01894 0.23159 2.84672 52 G - - > 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 33 2.05322 2.79546 0.30754 2.58576 53 G - - > 1.38629 1.38629 1.38629 1.38629 0.07943 3.88134 2.88719 1.46634 0.26236 1.09861 0.40547 34 2.52080 3.37260 0.18291 2.94774 54 G - - , 1.38629 1.38629 1.38629 1.38629 0.04369 3.84560 3.84560 1.46634 0.26236 0.55393 0.85493 35 1.48079 2.51762 0.50817 2.40464 55 G - - < 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 36 2.04903 2.84301 0.29168 2.71990 56 G - - < 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 37 0.51468 2.65657 1.38458 2.50481 57 A - - < 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 38 2.51996 3.13503 0.18646 3.07594 58 G - - < 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 39 2.51959 3.13462 0.18655 3.07536 59 G - - < 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 40 2.51924 3.13422 0.18663 3.07480 60 G - - < 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 41 2.51893 3.13387 0.18671 3.07431 61 G - - < 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 42 0.99394 2.36726 0.84171 2.25216 62 g - - < 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 43 0.17305 3.13781 2.87192 2.83132 63 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 44 1.83072 2.14335 2.51625 0.44367 64 U - - _ 1.38629 1.38629 1.38629 1.38629 0.18130 1.92969 3.88134 0.69969 0.68665 1.09861 0.40547 45 2.59511 3.45804 0.16756 3.03347 68 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 46 2.59511 3.45804 0.16756 3.03347 69 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 47 2.59511 3.45804 0.16756 3.03347 70 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 48 2.48220 0.96306 2.17971 0.86359 71 u - - > 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 49 3.27922 0.22032 2.96643 2.22017 72 C - - > 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 50 3.27961 0.22028 2.96660 2.22025 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 51 3.27969 0.22027 2.96663 2.22026 74 C - - > 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 52 3.27905 0.22033 2.96635 2.22014 75 C - - > 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 53 2.71808 1.79488 2.45949 0.38218 76 U - - > 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 54 2.93876 0.31120 2.65922 1.93446 77 C - - > 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 55 2.62879 0.58416 2.32962 1.29855 78 C - - > 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 56 2.05777 2.80189 0.30544 2.59341 79 G - - ) 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 57 2.30857 3.02472 0.23017 2.85384 80 G - - ) 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 58 2.66430 1.72152 2.40377 0.41373 81 U - - ) 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 59 2.82321 2.02830 2.46640 0.32278 82 U - - ) 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 60 2.59511 3.45804 0.16756 3.03347 83 G - - - 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 61 3.07622 0.30273 2.80309 1.86793 84 C - - ) 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 62 2.30141 3.01535 0.23248 2.84230 85 G - - ) 1.38629 1.38629 1.38629 1.38629 0.18011 3.88134 1.93654 1.46634 0.26236 1.09861 0.40547 63 1.57045 1.75725 1.46680 0.94451 86 u - - - 1.38629 1.38629 1.38629 1.38629 0.09903 3.74943 2.64861 1.46634 0.26236 0.25156 1.50322 64 1.72377 1.23338 1.30957 1.34567 87 c - - ) 1.38629 1.38629 1.38629 1.38629 0.04398 3.83908 3.83908 1.46634 0.26236 0.50994 0.91762 65 1.66467 2.26442 0.56852 1.96258 88 G - - ) 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 66 2.54187 0.73080 2.23464 1.10043 89 c - - ) 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 67 1.17441 2.30855 0.74100 2.16319 90 g - - ) 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 68 3.29720 0.21852 2.97412 2.22361 91 C - - ) 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 69 1.66590 2.78599 0.42055 2.37918 92 G - - : 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 70 1.94413 2.98222 0.31475 2.57392 93 G - - : 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 71 0.17305 3.13781 2.87192 2.83132 94 A - - : 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 72 0.17305 3.13781 2.87192 2.83132 95 A - - : 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 73 1.90786 2.95591 0.32666 2.54797 96 G - - : 1.38629 1.38629 1.38629 1.38629 0.04212 3.88134 3.88134 1.46634 0.26236 1.09861 0.40547 74 2.59511 3.45804 0.16756 3.03347 97 G - - : 1.38629 1.38629 1.38629 1.38629 0.02128 3.86050 * 1.46634 0.26236 0.00000 * //