INFERNAL1/a [1.1.5 | Sep 2023] NAME MDR-NUDIX ACC RF02918 DESC MDR-NUDIX RNA STATES 186 NODES 50 CLEN 59 W 94 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 05:25:30 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02918/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 15 EFFN 4.171143 CKSUM 3345416539 NULL 0.000 0.000 0.000 0.000 GA 54.90 TC 57.20 NC 54.70 EFP7GF -11.2087 0.71930 ECMLC 0.60631 -9.79222 0.53168 1600000 627520 0.001912 ECMGC 0.46469 -16.20834 -4.28051 1600000 102148 0.003916 ECMLI 0.54554 -8.85656 2.13088 1600000 481241 0.002494 ECMGI 0.47867 -11.89303 -0.90330 1600000 77029 0.005193 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 94 135 -7.659 -7.866 -0.032 -6.280 IL 1 1 2 1 4 1 21 97 137 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 20 96 137 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 2 20 94 135 -8.634 -0.013 -7.288 1.895 -3.699 -3.212 -3.374 D 4 2 3 5 3 0 16 92 133 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 20 95 136 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - C - - - ML 6 5 3 8 3 1 19 93 134 -8.634 -0.013 -7.288 -1.969 1.525 -2.866 -0.456 D 7 5 3 8 3 0 16 91 132 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 19 94 135 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 3 1 18 92 133 -8.634 -0.013 -7.288 -1.238 -0.982 -1.377 1.425 D 10 8 3 11 3 0 15 90 131 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 18 93 134 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 17 91 132 -8.634 -0.013 -7.288 1.895 -3.699 -3.212 -3.374 D 13 11 3 14 3 0 15 90 130 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 17 92 133 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 2 1 16 90 131 -9.131 -0.003 -1.935 -1.185 -2.685 1.652 D 16 14 3 17 2 0 15 89 130 -8.445 -0.004 IL 17 17 3 17 2 1 16 91 131 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 6 ] - - - - - - B 18 17 3 19 63 0 15 89 130 [ BEGL 7 ] - - - - - - S 19 18 1 20 4 0 0 47 82 -0.087 -4.565 -6.643 -7.283 [ MATP 8 ] 6 31 G C - - MP 20 19 1 24 6 2 2 47 82 -9.379 -9.319 -0.017 -8.095 -8.375 -8.770 -5.869 -3.649 -6.175 -0.602 -6.788 -5.110 -1.875 -6.428 -4.991 3.822 -5.264 -1.413 -2.238 -5.184 -3.990 -5.037 ML 21 19 1 24 6 1 1 46 81 -6.808 -7.154 -0.750 -1.563 -7.004 -4.534 1.038 -0.906 -0.651 -0.365 MR 22 19 1 24 6 1 1 45 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 23 19 1 24 6 0 0 42 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 24 24 5 24 6 1 1 47 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 25 25 6 25 5 1 1 47 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 30 A U - - MP 26 25 6 30 6 2 2 45 80 -9.421 -9.360 -0.017 -8.137 -8.417 -8.812 -5.081 -3.863 -4.905 3.785 -6.022 -7.269 -1.640 -4.861 -4.867 -0.333 -5.471 -1.188 -2.036 -6.171 -3.569 -3.748 ML 27 25 6 30 6 1 1 44 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 28 25 6 30 6 1 1 43 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 29 25 6 30 6 0 0 40 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 30 30 5 30 6 1 1 45 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 31 31 6 31 5 1 1 45 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 29 u a - - MP 32 31 6 36 6 2 2 43 78 -9.421 -9.360 -0.017 -8.137 -8.417 -8.812 -3.395 -3.293 -3.449 1.779 -2.769 -4.227 2.026 -3.333 -3.443 0.637 -3.943 -1.273 2.258 -3.627 -0.465 -2.369 ML 33 31 6 36 6 1 1 41 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 34 31 6 36 6 1 1 41 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 35 31 6 36 6 0 0 38 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 36 36 5 36 6 1 1 43 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 37 37 6 37 5 1 1 43 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 28 C G - - MP 38 37 6 42 6 2 2 41 76 -9.421 -9.360 -0.118 -8.137 -8.417 -3.856 -4.572 -4.527 -4.330 -0.633 -3.043 -4.808 3.074 -3.820 -4.331 -0.457 -4.667 -2.435 2.260 -4.652 -0.685 -3.147 ML 39 37 6 42 6 1 1 39 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 40 37 6 42 6 1 1 39 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 41 37 6 42 6 0 0 37 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 42 42 5 42 6 1 1 41 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 43 43 6 43 5 1 1 41 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 27 C G - - MP 44 43 6 48 4 2 2 40 75 -1.421 -3.068 -1.022 -6.074 -4.420 -4.399 -4.174 -0.545 -2.894 -4.637 3.318 -3.676 -4.186 -0.365 -4.514 -2.352 1.242 -4.497 0.416 -3.012 ML 45 43 6 48 4 1 1 35 71 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 46 43 6 48 4 1 1 34 69 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 47 43 6 48 4 0 0 36 71 -2.367 -2.147 -1.842 -1.731 IL 48 48 5 48 4 1 1 39 74 -0.840 -1.418 -4.006 -7.743 0.000 0.000 0.000 0.000 IR 49 49 6 49 3 1 1 35 70 -0.764 -1.317 -6.699 0.000 0.000 0.000 0.000 [ MATL 13 ] 15 - u - - - ML 50 49 6 52 3 1 1 16 34 -8.634 -0.013 -7.288 0.161 -0.103 -0.651 0.394 D 51 49 6 52 3 0 0 16 34 -6.174 -1.687 -0.566 IL 52 52 3 52 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 16 - c - - - ML 53 52 3 55 3 1 1 14 33 -8.634 -0.013 -7.288 0.155 0.393 -0.744 -0.034 D 54 52 3 55 3 0 0 15 33 -6.174 -1.687 -0.566 IL 55 55 3 55 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 17 - u - - - ML 56 55 3 58 3 1 1 13 31 -8.634 -0.071 -4.452 0.088 0.011 -0.214 0.093 D 57 55 3 58 3 0 0 13 32 -6.174 -1.687 -0.566 IL 58 58 3 58 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 18 - u - - - ML 59 58 3 61 2 1 1 1 1 * 0.000 0.249 -0.093 -0.650 0.307 D 60 58 3 61 2 0 0 0 0 * 0.000 IL 61 61 3 61 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 17 ] - - - - - - E 62 61 3 -1 0 0 0 0 0 [ BEGR 18 ] - - - - - - S 63 18 1 64 3 0 3 69 110 -8.634 -0.013 -7.288 IL 64 64 2 64 3 1 2 70 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 32 - C - - - ML 65 64 2 67 3 1 3 69 110 -8.634 -0.013 -7.288 -3.318 1.871 -4.097 -2.455 D 66 64 2 67 3 0 0 66 108 -6.174 -1.687 -0.566 IL 67 67 3 67 3 1 2 69 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 33 - U - - - ML 68 67 3 70 3 1 3 68 109 -4.136 -0.094 -7.288 -0.787 -1.410 -1.394 1.413 D 69 67 3 70 3 0 0 65 107 -6.174 -1.687 -0.566 IL 70 70 3 70 3 1 2 68 110 -1.301 -0.853 -4.629 0.000 0.000 0.000 0.000 [ MATL 21 ] 36 - C - - - ML 71 70 3 73 3 1 3 66 108 -8.634 -0.013 -7.288 -3.318 1.871 -4.097 -2.455 D 72 70 3 73 3 0 0 64 106 -6.174 -1.687 -0.566 IL 73 73 3 73 3 1 2 67 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 37 - U - - - ML 74 73 3 76 3 1 3 65 107 -8.634 -0.013 -7.288 -2.753 -2.543 -3.528 1.845 D 75 73 3 76 3 0 0 63 105 -6.174 -1.687 -0.566 IL 76 76 3 76 3 1 2 66 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 38 - A - - - ML 77 76 3 79 3 1 2 64 106 -8.634 -0.013 -7.288 1.659 -1.537 -2.173 -1.853 D 78 76 3 79 3 0 0 63 104 -6.174 -1.687 -0.566 IL 79 79 3 79 3 1 1 65 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 39 - u - - - ML 80 79 3 82 5 1 2 63 105 -7.694 -0.026 -7.509 -7.721 -8.613 -0.877 0.521 -1.261 0.681 D 81 79 3 82 5 0 0 62 103 -4.959 -0.803 -4.221 -2.596 -2.508 IL 82 82 3 82 5 1 1 64 105 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 40 85 u a - - MP 83 82 3 87 6 2 3 62 104 -9.421 -9.360 -0.017 -8.137 -8.417 -8.812 -1.248 -2.458 -2.614 1.008 -2.410 -3.445 1.452 -2.819 -2.669 1.761 -3.212 -0.715 2.106 -2.741 0.063 -1.733 ML 84 82 3 87 6 1 1 61 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 85 82 3 87 6 1 1 60 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 86 82 3 87 6 0 0 57 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 87 87 5 87 6 1 1 62 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 88 88 6 88 5 1 1 62 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 41 84 C G - - MP 89 88 6 93 6 2 3 60 102 -9.421 -9.360 -0.017 -8.137 -8.417 -8.812 -6.040 -6.072 -5.456 -2.241 -3.929 -5.670 3.835 -4.895 -5.601 -2.142 -5.654 -4.092 -0.619 -6.005 -1.718 -4.407 ML 90 88 6 93 6 1 1 59 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 91 88 6 93 6 1 1 58 100 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 92 88 6 93 6 0 0 55 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 93 93 5 93 6 1 1 60 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 94 94 6 94 5 1 1 60 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 42 83 G C - - MP 95 94 6 99 6 2 3 58 100 -4.945 -9.360 -0.063 -8.137 -8.417 -8.812 -5.288 -0.849 -5.385 -0.177 -6.305 -4.981 -1.411 -5.854 -4.813 3.708 -5.095 -1.141 -1.692 -4.790 -3.468 -4.302 ML 96 94 6 99 6 1 1 57 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 97 94 6 99 6 1 1 56 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 98 94 6 99 6 0 0 54 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 99 99 5 99 6 1 1 58 99 -3.042 -3.305 -0.509 -4.960 -5.737 -5.397 0.000 0.000 0.000 0.000 IR 100 100 6 100 5 1 1 58 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 44 82 c g - - MP 101 100 6 105 4 2 2 56 98 -3.369 -7.866 -0.175 -6.280 -1.147 -2.373 -2.408 0.791 -2.180 -3.248 2.415 -2.611 -1.201 0.767 -3.004 -0.817 1.550 -2.555 0.430 -1.566 ML 102 100 6 105 4 1 1 55 97 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 103 100 6 105 4 1 1 55 96 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 104 100 6 105 4 0 0 53 95 -4.568 -4.250 -2.265 -0.520 IL 105 105 5 105 4 1 1 56 97 -1.653 -3.351 -0.820 -5.836 0.000 0.000 0.000 0.000 IR 106 106 6 106 3 1 1 56 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 47 - a - - - ML 107 106 6 109 3 1 1 54 95 -8.634 -0.013 -7.288 0.712 -0.868 -0.116 -0.166 D 108 106 6 109 3 0 0 52 93 -6.174 -1.687 -0.566 IL 109 109 3 109 3 1 1 55 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 48 - u - - - ML 110 109 3 112 3 1 1 53 94 -8.634 -0.013 -7.288 0.166 -0.288 -0.665 0.515 D 111 109 3 112 3 0 0 51 92 -6.174 -1.687 -0.566 IL 112 112 3 112 3 1 1 54 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 49 - A - - - ML 113 112 3 115 3 1 1 52 93 -8.634 -0.013 -7.288 1.895 -3.699 -3.212 -3.374 D 114 112 3 115 3 0 0 50 92 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 1 53 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 50 - c - - - ML 116 115 3 118 3 1 1 51 92 -4.741 -0.064 -7.307 -1.390 0.972 -2.265 0.534 D 117 115 3 118 3 0 0 50 91 -5.620 -0.734 -1.403 IL 118 118 3 118 3 1 1 51 93 -2.164 -0.455 -4.402 0.000 0.000 0.000 0.000 [ MATR 33 ] - 81 - a - - MR 119 118 3 121 3 1 1 50 91 -8.989 -0.012 -7.307 0.954 -0.328 -0.612 -0.709 D 120 118 3 121 3 0 0 48 89 -6.390 -1.568 -0.620 IR 121 121 3 121 3 1 1 51 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 34 ] - 80 - U - - MR 122 121 3 124 3 1 1 49 90 -8.989 -0.012 -7.307 -2.753 -2.543 -3.528 1.845 D 123 121 3 124 3 0 0 47 88 -6.390 -1.568 -0.620 IR 124 124 3 124 3 1 1 50 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 35 ] - 79 - C - - MR 125 124 3 127 3 1 1 48 89 -8.989 -0.012 -7.307 -0.537 1.387 -2.338 -1.008 D 126 124 3 127 3 0 0 46 87 -6.390 -1.568 -0.620 IR 127 127 3 127 3 1 1 49 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 78 - a - - MR 128 127 3 130 3 1 1 47 88 -8.989 -0.012 -7.307 0.936 -2.100 0.599 -1.559 D 129 127 3 130 3 0 0 45 86 -6.390 -1.568 -0.620 IR 130 130 3 130 3 1 1 48 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 77 - C - - MR 131 130 3 133 5 1 1 46 87 -7.694 -0.026 -7.509 -7.721 -8.613 -2.496 1.718 -3.351 -1.198 D 132 130 3 133 5 0 0 45 86 -5.352 -0.707 -2.978 -4.409 -2.404 IR 133 133 3 133 5 1 1 46 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 52 76 G C - - MP 134 133 3 138 6 2 2 45 86 -9.421 -9.360 -0.017 -8.137 -8.417 -8.812 -6.016 -3.723 -6.366 -0.711 -6.983 -5.163 -2.034 -6.608 -5.069 3.837 -5.336 -1.498 -2.396 -5.273 -4.163 -5.226 ML 135 133 3 138 6 1 1 44 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 136 133 3 138 6 1 1 43 84 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 137 133 3 138 6 0 0 40 82 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 138 138 5 138 6 1 1 45 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 139 139 6 139 5 1 1 44 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 53 75 U A - - MP 140 139 6 144 6 2 2 43 84 -9.421 -9.360 -0.017 -8.137 -8.417 -8.812 -6.004 -5.850 -5.627 -2.071 -4.261 -6.021 0.066 -5.056 -5.621 -2.001 -5.909 -3.713 3.793 -6.053 -1.894 -4.150 ML 141 139 6 144 6 1 1 42 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 142 139 6 144 6 1 1 41 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 143 139 6 144 6 0 0 39 80 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 144 144 5 144 6 1 1 43 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 145 145 6 145 5 1 1 42 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 54 74 u a - - MP 146 145 6 150 6 2 2 41 82 -9.421 -9.360 -0.017 -8.137 -8.417 -8.812 -3.886 -3.882 -3.835 -0.158 -0.463 -4.479 2.364 -3.546 -3.830 -0.019 -4.266 -1.902 2.728 -4.073 -0.551 -2.728 ML 147 145 6 150 6 1 1 41 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 148 145 6 150 6 1 1 40 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 149 145 6 150 6 0 0 38 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 150 150 5 150 6 1 1 41 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 151 151 6 151 5 1 1 40 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 55 73 c g - - MP 152 151 6 156 6 2 2 39 80 -9.421 -9.360 -0.017 -8.137 -8.417 -8.812 -2.837 -2.831 -2.964 0.678 -1.087 -3.803 2.263 -3.000 -2.970 1.455 -3.514 -0.233 1.820 -3.111 -0.297 -1.970 ML 153 151 6 156 6 1 1 41 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 154 151 6 156 6 1 1 38 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 155 151 6 156 6 0 0 37 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 156 156 5 156 6 1 1 39 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 157 157 6 157 5 1 1 39 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 56 72 G C - - MP 158 157 6 162 6 2 2 37 78 -9.421 -9.360 -0.060 -4.950 -8.417 -8.812 -3.974 -2.700 -3.873 1.185 -4.686 -4.461 0.047 -4.409 -4.111 3.211 -4.430 0.251 0.322 -3.770 -1.953 -2.819 ML 159 157 6 162 6 1 1 41 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 160 157 6 162 6 1 1 37 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 161 157 6 162 6 0 0 37 78 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 162 162 5 162 6 1 1 37 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 163 163 6 163 5 1 1 36 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 57 71 G C - - MP 164 163 6 168 4 2 2 33 75 -7.574 -7.781 -0.034 -6.195 -5.143 -3.346 -5.237 0.541 -6.125 -5.017 -1.269 -5.625 -4.707 3.680 -5.023 -1.027 -1.564 -4.783 -3.323 -4.110 ML 165 163 6 168 4 1 1 41 83 -1.661 -4.378 -0.944 -3.108 -0.042 -0.942 0.798 -0.378 MR 166 163 6 168 4 1 1 37 78 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 167 163 6 168 4 0 0 36 77 -4.568 -4.250 -2.265 -0.520 IL 168 168 5 168 4 1 1 43 84 -0.644 -2.337 -2.727 -6.464 0.000 0.000 0.000 0.000 IR 169 169 6 169 3 1 1 27 52 -1.056 -1.047 -4.826 0.000 0.000 0.000 0.000 [ MATL 44 ] 63 - A - - - ML 170 169 6 172 3 1 1 17 36 -8.634 -0.013 -7.288 1.895 -3.699 -3.212 -3.374 D 171 169 6 172 3 0 0 17 35 -6.174 -1.687 -0.566 IL 172 172 3 172 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 64 - C - - - ML 173 172 3 175 3 1 1 16 34 -8.634 -0.013 -7.288 -1.988 1.534 -2.884 -0.482 D 174 172 3 175 3 0 0 16 34 -6.174 -1.687 -0.566 IL 175 175 3 175 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 65 - G - - - ML 176 175 3 178 3 1 1 14 33 -8.634 -0.524 -1.726 -2.895 -4.274 1.900 -3.633 D 177 175 3 178 3 0 0 14 33 -6.174 -1.687 -0.566 IL 178 178 3 178 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 66 - A - - - ML 179 178 3 181 3 1 1 13 31 -8.128 -0.018 -6.782 1.480 -1.861 -0.861 -1.378 D 180 178 3 181 3 0 0 12 30 -8.595 -0.199 -2.986 IL 181 181 3 181 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 67 - G - - - ML 182 181 3 184 2 1 1 1 1 * 0.000 -1.311 -2.166 1.446 -0.621 D 183 181 3 184 2 0 0 0 0 * 0.000 IL 184 184 3 184 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 49 ] - - - - - - E 185 184 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME MDR-NUDIX ACC RF02918 DESC MDR-NUDIX RNA LENG 59 MAXL 137 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 05:25:30 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02918/CM NSEQ 15 EFFN 7.086182 CKSUM 3345416539 STATS LOCAL MSV -7.5415 0.71930 STATS LOCAL VITERBI -8.6073 0.71930 STATS LOCAL FORWARD -3.6351 0.71930 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.40174 1.24102 1.46656 1.45233 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 0.00000 * 1 0.03652 4.62814 4.25412 4.43307 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 2 3.28170 0.24607 3.92541 1.82737 2 C - - : 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 3 2.67400 2.24675 2.47885 0.29916 3 U - - : 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 4 0.03652 4.62814 4.25412 4.43307 4 A - - : 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 5 3.23662 2.36734 3.75373 0.17014 5 U - - : 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 6 2.84074 4.15184 0.09698 4.00049 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 7 0.07488 4.34490 3.13881 4.14537 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 8 1.34070 1.34748 2.38878 0.95010 8 u - - < 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 9 3.50351 0.54194 3.31566 1.04418 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.12699 4.63585 2.21131 1.46634 0.26236 1.09861 0.40547 10 3.38741 0.34634 3.19513 1.52341 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.52168 0.92709 4.53065 0.99459 0.46184 0.16300 1.89440 11 1.28249 1.43541 1.86761 1.10822 15 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 12 1.29444 1.02509 1.95213 1.49070 16 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 13 1.35630 1.32455 1.50731 1.36664 17 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 14 1.20976 1.42432 1.87119 1.18052 18 u - - _ 1.38629 1.38629 1.38629 1.38629 0.83572 0.76816 2.27722 1.13696 0.38683 1.09861 0.40547 15 1.97780 3.36129 0.24288 3.15651 27 G - - > 1.38629 1.38629 1.38629 1.38629 0.02161 4.53838 4.53838 1.46634 0.26236 0.17320 1.83868 16 1.11065 3.49045 0.50631 3.28472 28 G - - > 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 17 1.03336 2.57304 1.24401 1.27418 29 a - - > 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 18 4.51461 3.59480 4.30400 0.05333 30 U - - > 1.38629 1.38629 1.38629 1.38629 0.08475 4.63585 2.63727 1.46634 0.26236 1.09861 0.40547 19 4.48078 0.07123 4.30425 3.12550 31 C - - > 1.38629 1.38629 1.38629 1.38629 0.02089 4.57200 4.57200 1.46634 0.26236 0.23985 1.54528 20 4.37985 0.04546 4.81943 3.73615 32 C - - - 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 21 2.13881 2.73066 2.52230 0.30550 33 U - - - 1.38629 1.38629 1.38629 1.38629 0.08475 2.63727 4.63585 0.78874 0.60590 1.09861 0.40547 22 4.37985 0.04546 4.81943 3.73615 36 C - - - 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 23 3.95789 3.72917 4.50644 0.05568 37 U - - - 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 24 0.16752 2.55868 3.36186 3.16628 38 A - - - 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 25 2.30631 0.92492 2.40672 0.88262 39 u - - - 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 26 1.80199 1.77293 1.32135 0.92025 40 u - - < 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 27 4.73835 0.05179 4.66120 3.43395 41 C - - < 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 28 2.56400 4.24245 0.11330 4.15086 42 G - - < 1.38629 1.38629 1.38629 1.38629 0.09045 2.56672 4.63585 0.23589 1.56003 1.09861 0.40547 29 1.96909 0.88493 1.87070 1.22534 44 c - - < 1.38629 1.38629 1.38629 1.38629 0.12696 2.21156 4.63585 0.49414 0.94185 1.09861 0.40547 30 0.84442 2.07920 1.44319 1.56547 47 a - - - 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 31 1.27530 1.59491 1.87872 1.00802 48 u - - - 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 32 0.03652 4.62814 4.25412 4.43307 49 A - - - 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 33 2.80463 0.61253 3.46379 1.00463 50 C - - - 1.38629 1.38629 1.38629 1.38629 0.06345 2.96077 4.63585 0.33998 1.24404 1.09861 0.40547 34 3.53847 4.55400 0.05166 4.53110 52 G - - < 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 35 4.82636 3.50487 4.75885 0.04776 53 U - - < 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 36 3.22370 0.95356 3.01132 0.64321 54 U - - < 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 37 2.28066 1.00702 1.42008 1.23518 55 c - - < 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 38 1.89738 2.87365 0.36468 2.31134 56 G - - < 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 39 2.39278 3.87254 0.14741 3.69387 57 G - - < 1.38629 1.38629 1.38629 1.38629 0.08521 2.63135 4.63585 1.59798 0.22603 1.09861 0.40547 40 0.03652 4.62814 4.25412 4.43307 63 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 41 3.29767 0.24034 3.93899 1.85021 64 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 42 3.99355 5.01040 0.03683 4.50465 65 G - - _ 1.38629 1.38629 1.38629 1.38629 0.44025 4.63585 1.06009 1.46634 0.26236 1.09861 0.40547 43 0.26372 3.08560 2.07330 2.80782 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02968 4.22528 4.22528 1.46634 0.26236 0.05448 2.93709 44 2.75527 3.38873 0.28736 1.88115 67 G - - _ 1.38629 1.38629 1.38629 1.38629 0.08521 2.63135 4.63585 0.78817 0.60638 1.09861 0.40547 45 4.07706 0.15394 3.85706 2.25772 71 C - - > 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 46 2.47690 0.46526 2.68422 1.51527 72 C - - > 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 47 1.27670 1.65774 0.98578 1.84942 73 g - - > 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 48 0.59591 3.18199 1.02981 2.98859 74 A - - > 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 49 0.05486 4.97539 3.32792 4.54615 75 A - - > 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 50 4.67580 0.06303 4.45686 3.21464 76 C - - > 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 51 3.72074 0.12984 4.27701 2.48099 77 C - - - 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 52 0.66620 3.41184 0.89652 3.09273 78 A - - - 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 53 1.87672 0.30068 3.58638 2.53959 79 C - - - 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 54 3.95789 3.72917 4.50644 0.05568 80 U - - - 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 55 0.64126 1.58346 1.86489 2.17867 81 A - - - 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 56 1.36251 2.21305 0.70477 1.96329 82 g - - > 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 57 4.30321 0.08577 4.09491 2.95635 83 C - - > 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 58 3.70449 4.80324 0.04456 4.53148 84 G - - > 1.38629 1.38629 1.38629 1.38629 0.01959 4.63585 4.63585 1.46634 0.26236 1.09861 0.40547 59 1.02390 1.41513 1.48157 1.76824 85 a - - > 1.38629 1.38629 1.38629 1.38629 0.00984 4.62611 * 1.46634 0.26236 0.00000 * //