# STOCKHOLM 1.0
#=GF ID Scr4115
#=GF AC RF02829
#=GF DE Streptomyces RNA 4115
#=GF AU Argasinska J; 0000-0003-2678-2824
#=GF GA 58.0
#=GF NC 55.0
#=GF TC 58.0
#=GF SE Argasinska J
#=GF SS Predicted; 21521948
#=GF TP Gene; sRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR SO; 0000370; small_regulatory_ncRNA;
#=GF RN [1]
#=GF RM 21521948
#=GF RT Deep sequencing-based identification of small non-coding RNAs in
#=GF RT Streptomyces coelicolor.
#=GF RA Vockenhuber MP, Sharma CM, Statt MG, Schmidt D, Xu Z, Dietrich S,
#=GF RA Liesegang H, Mathews DH, Suess B
#=GF RL RNA Biol. 2011;8:468-477.
#=GF CC Identified by deep sequencing of transcriptome at the end of exponential
#=GF CC growth phase. Sequencing size consistent with notrthern blot size.
#=GF CC Streptomyces specific. 
#=GF WK Streptomyces_coelicolor
#=GF SQ 6

AL645882.2/4515318-4515426 GCGUGGGUCGGCCCGCUGUACUGGAUCCAGUGGGCUGGGGG-ACGC-CGCCGCCUACAUCCCCGCGGGCGGCGGACCGGUCCGGGGGGCG-AGUCCCGUCCCCCGGACUGCG
CP006259.1/4194142-4194034 GCGUGGGUCGGCCCGCUGUACUGGAUCCAGCGGGCUGGGGG-ACAC-CGCCACCUACAUCCCCGCGGGUGGCGGACCGGUCCGGGAGGCG-AUGCCCGCCUCCCGGACUGUG
HE971709.1/5275677-5275785 GCGUGGGUCGGCCCGCUGUACUGGAUCCAGUGGGCUGGGGG-ACAC-CGCCGCCUCCAUCCCCGCGGGCGGCGGAACGGUCCGGGGGGCG-AGUCCCGCCUCCCGGACUGCG
CP002994.1/359325-359433   GCGUGGGUCGGCCCGCUGUACUGGAUCCAGCGGGCUGGGGG-ACGC-CGCCGCCUCAUUCCCCGCGGGUGGCGGAACGGUCCGGGAGGCG-AAUGCCGCCUCCCGGACUGUC
CP007699.2/4768104-4768212 GCGUGGGUUGGCCCGCUGCACUGGAUCCAGUGGGCUGGGGG-AUAC-CGUCACCUCAUUCCCCGCGGGUGACGGUCCGGUCCGGGAGGCG-AAGCCCGCUUCCCGGACCGUC
CP010519.1/4753949-4754060 GCGUGGGUCGGCCCGCUGCACUGGGUCCAGCGGGCUGGGGGAACACCCGCCGUCCCCAUCCCCGCGGGCGGCGGACCGGUCCGGGAGGCGCAGCGGUGCCUCCCGGACUGCG
#=GC SS_cons               [[,,,(((<<<<<<<<<<_________>>>>>>>>>><___._>,<.<<<<<<<<-<______>->>>>>>>>>)))<<<<<<<<<<<<<._____>>>>>>>>>>>>>]]:
#=GC RF                    gcGUGGgucgGcccgcuGuAcUGGaUcCagcgggCcgGGGG.ACac.cGccgcccccaUccccgcgggcggCggacCgGuccGGGgGGcG.AauccCgCCcCCCggaCcgcg
//
