# STOCKHOLM 1.0
#=GF ID Srn266
#=GF AC RF02822
#=GF DE Streptococcus RNA 266
#=GF AU Argasinska J; 0000-0003-2678-2824
#=GF GA 63.0
#=GF NC 62.0
#=GF TC 63.0
#=GF SE Argasinska J
#=GF SS Predicted; 22274957
#=GF TP Gene; sRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR SO; 0000370; small_regulatory_ncRNA;
#=GF RN [1]
#=GF RM 22274957
#=GF RT Identification of 88 regulatory small RNAs in the TIGR4 strain of the
#=GF RT human pathogen Streptococcus pneumoniae.
#=GF RA Acebo P, Martin-Galiano AJ, Navarro S, Zaballos A, Amblar M
#=GF RL RNA. 2012;18:530-546.
#=GF CC SP_0836 target predicted. 
#=GF WK Streptococcus_sRNA
#=GF SQ 4

AGPS01000006.1/91244-91354 AAUGAGUUGUUUUGUCGCUUUUCAUUAUAGGUCAUAUGGGACUUU-UUUCUACACAAAAAUAGGCUCCAUAAUAUCCAUAGGGGAUUUACCCACUACAAAUAUUAUAGAGUC
AE007317.1/30029-30139     AAUGAGUUGUUUUGUCGCUUUUCAUUAUAGGUCAUAUGGGACUUUUUUUCUACAC-AAAAUAGGCUCCAUAAUAUCCAUAGGGGAUUUACUCACUAUGGAUAUUAUGGAGCC
CP000023.1/791383-791493   AAUGA-UAGUUUGAGCACUUUUCAUUAUAGGUCAUAUGGGACUUUUUGUAUAUACUCAAAAAGGCUCCAUAAUUUCCAUGGUGGAUUUACCCACUACAGAAAUUAUAGAGCC
CP014699.1/1054269-1054158 AAUGAGAUGUUUGGUCGCUUUUCAUUAUAAGUCAUAUGGGACUUUUUUUGUAUAGCAAAAAAAGCGCCAUAAUUUCCGCAGUGGAGUUACCCACUACAGAUAUUAUAGAGCC
#=GC SS_cons               <<<<<<--<<______>>-->>>>>>::<<<<<______>>>>>::::::::::::::::::<<<<<-<<<<<<<<--<<<<<<______>>>>>>-->>>>>>>>->>>>>
#=GC RF                    aauGaguuGcUUuguCgCUUcuCauuAUagGuCAUAUGGGaCcuUUUuUaUAuAcuaAAAaAGGCuCCauaaugucCauaGuGGAuUUACCCaCuacagacauuauaGaGCC
//
