INFERNAL1/a [1.1.5 | Sep 2023] NAME PssrA ACC RF02797 DESC Plasmid-encoded Shigella sRNA A STATES 288 NODES 75 CLEN 93 W 110 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 19:08:50 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02797/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 6 EFFN 1.016602 CKSUM 3647899667 NULL 0.000 0.000 0.000 0.000 GA 69.00 TC 69.40 NC 68.90 EFP7GF -7.1575 0.71863 ECMLC 0.55005 -9.32372 1.33080 1600000 421078 0.002850 ECMGC 0.40400 -13.27206 -2.48356 1600000 31259 0.012796 ECMLI 0.52650 -6.98768 3.45780 1600000 293500 0.004089 ECMGI 0.43923 -8.04661 1.81965 1600000 30487 0.013120 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 110 131 -6.472 -7.717 -0.107 -4.171 IL 1 1 2 1 4 9 42 112 133 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 9 42 112 133 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 93 - A - - MR 3 2 3 5 2 8 41 110 131 -7.865 -0.006 1.480 -1.597 -1.305 -1.074 D 4 2 3 5 2 7 40 110 130 -4.432 -0.068 IR 5 5 3 5 2 8 41 111 132 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 2 ] - - - - - - B 6 5 3 7 210 7 40 109 130 [ BEGL 3 ] - - - - - - S 7 6 1 8 4 0 19 83 103 -0.052 -6.631 -6.038 -6.678 [ MATP 4 ] 1 67 u a - - MP 8 7 1 12 6 2 20 83 103 -8.957 -8.896 -0.023 -7.673 -7.953 -8.348 -3.494 -3.271 -3.400 0.373 -2.510 -4.022 1.796 -3.148 -3.416 0.778 -3.819 -1.184 2.833 -3.662 -0.204 -2.297 ML 9 7 1 12 6 1 17 82 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 10 7 1 12 6 1 15 82 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 11 7 1 12 6 0 13 80 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 12 12 5 12 6 1 18 83 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 13 13 6 13 5 1 18 83 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 2 66 G C - - MP 14 13 6 18 4 2 18 81 101 -6.515 -6.722 -0.072 -5.136 -3.981 -2.739 -4.039 0.681 -4.162 -4.370 0.298 -4.204 -3.786 3.384 -4.184 -0.423 -0.115 -3.958 -1.705 -2.928 ML 15 13 6 18 4 1 16 81 102 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 16 13 6 18 4 1 14 81 101 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 17 13 6 18 4 0 12 80 100 -4.568 -4.250 -2.265 -0.520 IL 18 18 5 18 4 1 17 83 103 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 19 19 6 19 3 1 17 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 3 - G - - - ML 20 19 6 22 3 1 16 79 99 -7.987 -0.024 -6.305 -0.749 -1.816 1.426 -1.202 D 21 19 6 22 3 0 12 78 98 -5.620 -0.734 -1.403 IL 22 22 3 22 3 1 15 80 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 65 - G - - MR 23 22 3 25 5 1 16 78 98 -6.753 -0.050 -6.569 -6.781 -7.672 -0.749 -1.816 1.426 -1.202 D 24 22 3 25 5 0 10 77 97 -5.352 -0.707 -2.978 -4.409 -2.404 IR 25 25 3 25 5 1 14 78 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 4 64 C G - - MP 26 25 3 30 6 2 15 77 97 -8.957 -8.896 -0.023 -7.673 -7.953 -8.348 -3.808 -3.627 -3.613 0.056 -2.522 -4.118 3.228 -3.251 -3.647 0.448 -3.977 -1.566 1.053 -3.919 -0.220 -2.516 ML 27 25 3 30 6 1 11 76 95 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 28 25 3 30 6 1 11 75 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 29 25 3 30 6 0 7 73 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 30 30 5 30 6 1 13 77 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 31 31 6 31 5 1 13 76 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 5 63 u a - - MP 32 31 6 36 6 2 14 75 95 -8.957 -8.896 -0.023 -7.673 -7.953 -8.348 -3.494 -3.271 -3.400 0.373 -2.510 -4.022 1.796 -3.148 -3.416 0.778 -3.819 -1.184 2.833 -3.662 -0.204 -2.297 ML 33 31 6 36 6 1 10 74 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 34 31 6 36 6 1 10 74 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 35 31 6 36 6 0 6 71 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 36 36 5 36 6 1 12 75 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 37 37 6 37 5 1 12 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 6 62 G C - - MP 38 37 6 42 4 2 12 73 93 -6.472 -7.717 -0.107 -4.171 -3.981 -2.739 -4.039 0.681 -4.162 -4.370 0.298 -4.204 -3.786 3.384 -4.184 -0.423 -0.115 -3.958 -1.705 -2.928 ML 39 37 6 42 4 1 8 72 92 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 40 37 6 42 4 1 9 72 92 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 41 37 6 42 4 0 6 70 90 -12.737 -14.007 -2.036 -0.404 IL 42 42 5 42 4 1 9 72 92 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 43 43 6 43 3 1 11 73 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 61 - A - - MR 44 43 6 46 5 1 11 71 91 -6.753 -0.050 -6.569 -6.781 -7.672 1.480 -1.597 -1.305 -1.074 D 45 43 6 46 5 0 5 70 90 -5.352 -0.707 -2.978 -4.409 -2.404 IR 46 46 3 46 5 1 9 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 7 60 C G - - MP 47 46 3 51 6 2 10 70 90 -8.957 -8.896 -0.023 -7.673 -7.953 -8.348 -3.016 -2.949 -1.206 0.473 -2.554 -3.797 3.000 -3.098 -3.124 0.834 -3.592 -1.097 1.016 -3.247 -0.396 -2.123 ML 48 46 3 51 6 1 7 69 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 49 46 3 51 6 1 5 69 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 50 46 3 51 6 0 3 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 51 51 5 51 6 1 8 70 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 52 52 6 52 5 1 8 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 8 59 G C - - MP 53 52 6 57 4 2 8 68 88 -6.515 -6.722 -0.072 -5.136 -3.981 -2.739 -4.039 0.681 -4.162 -4.370 0.298 -4.204 -3.786 3.384 -4.184 -0.423 -0.115 -3.958 -1.705 -2.928 ML 54 52 6 57 4 1 6 68 88 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 55 52 6 57 4 1 4 68 88 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 56 52 6 57 4 0 3 67 87 -4.568 -4.250 -2.265 -0.520 IL 57 57 5 57 4 1 7 69 90 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 58 58 6 58 3 1 7 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 9 - A - - - ML 59 58 6 61 3 1 7 66 85 -7.567 -0.027 -6.221 1.480 -1.597 -1.305 -1.074 D 60 58 6 61 3 0 2 64 84 -6.174 -1.687 -0.566 IL 61 61 3 61 3 1 6 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 10 - A - - - ML 62 61 3 64 3 1 6 64 84 -7.567 -0.027 -6.221 1.480 -1.597 -1.305 -1.074 D 63 61 3 64 3 0 1 63 83 -6.174 -1.687 -0.566 IL 64 64 3 64 3 1 6 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 11 - A - - - ML 65 64 3 67 3 1 6 63 83 -7.567 -0.027 -6.221 1.480 -1.597 -1.305 -1.074 D 66 64 3 67 3 0 1 62 82 -6.174 -1.687 -0.566 IL 67 67 3 67 3 1 5 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 12 - A - - - ML 68 67 3 70 3 1 5 62 82 -7.987 -0.024 -6.305 1.480 -1.597 -1.305 -1.074 D 69 67 3 70 3 0 1 61 81 -5.620 -0.734 -1.403 IL 70 70 3 70 3 1 4 63 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 58 - G - - MR 71 70 3 73 3 1 4 61 81 -7.987 -0.024 -6.305 -0.749 -1.816 1.426 -1.202 D 72 70 3 73 3 0 0 60 79 -6.390 -1.568 -0.620 IR 73 73 3 73 3 1 3 62 82 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 57 - G - - MR 74 73 3 76 3 1 4 60 80 -7.987 -0.024 -6.305 -0.749 -1.816 1.426 -1.202 D 75 73 3 76 3 0 0 59 78 -6.390 -1.568 -0.620 IR 76 76 3 76 3 1 3 61 81 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 56 - A - - MR 77 76 3 79 5 1 4 59 79 -6.753 -0.050 -6.569 -6.781 -7.672 1.480 -1.597 -1.305 -1.074 D 78 76 3 79 5 0 0 58 78 -5.352 -0.707 -2.978 -4.409 -2.404 IR 79 79 3 79 5 1 2 60 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 13 55 G C - - MP 80 79 3 84 6 2 5 58 78 -8.957 -8.896 -0.023 -7.673 -7.953 -8.348 -3.981 -2.739 -4.039 0.681 -4.162 -4.370 0.298 -4.204 -3.786 3.384 -4.184 -0.423 -0.115 -3.958 -1.705 -2.928 ML 81 79 3 84 6 1 1 57 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 82 79 3 84 6 1 1 57 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 83 79 3 84 6 0 0 54 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 84 84 5 84 6 1 1 58 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 85 85 6 85 5 1 1 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 14 54 a u - - MP 86 85 6 90 6 2 5 56 76 -8.957 -8.896 -0.023 -7.673 -7.953 -8.348 -3.245 -2.431 -3.292 2.784 -3.358 -4.392 0.916 -3.358 -3.215 1.688 -3.732 -0.013 0.489 -3.670 -1.032 -2.166 ML 87 85 6 90 6 1 1 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 88 85 6 90 6 1 1 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 89 85 6 90 6 0 0 52 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 90 90 5 90 6 1 1 56 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 91 91 6 91 5 1 1 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 15 53 g c - - MP 92 91 6 96 6 2 4 54 74 -8.957 -8.896 -0.023 -7.673 -7.953 -8.348 -3.086 -0.878 -3.155 1.172 -3.458 -3.847 0.707 -3.491 -3.187 2.898 -3.627 0.395 0.432 -3.187 -1.161 -2.159 ML 93 91 6 96 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 94 91 6 96 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 95 91 6 96 6 0 0 50 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 96 96 5 96 6 1 1 54 74 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 97 97 6 97 5 1 1 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 16 52 c g - - MP 98 97 6 102 6 2 4 52 72 -8.957 -8.896 -0.023 -7.673 -7.953 -8.348 -1.958 -1.943 -2.121 1.166 -2.021 -2.921 1.583 -2.391 -2.179 1.492 -2.709 -0.309 1.495 -1.255 -0.078 0.339 ML 99 97 6 102 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 100 97 6 102 6 1 1 51 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 101 97 6 102 6 0 0 48 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 102 102 5 102 6 1 1 52 72 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 103 103 6 103 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 17 51 u g - - MP 104 103 6 108 6 2 4 50 70 -8.957 -8.896 -0.023 -7.673 -7.953 -8.348 -3.368 -3.245 -3.229 0.345 -2.243 -3.778 2.018 -2.933 -3.264 0.683 -3.633 -1.264 1.290 -3.514 2.320 -2.174 ML 105 103 6 108 6 1 1 49 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 106 103 6 108 6 1 1 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 107 103 6 108 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 108 108 5 108 6 1 1 50 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 109 109 6 109 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 18 50 u g - - MP 110 109 6 114 4 2 2 48 68 -6.472 -7.717 -0.107 -4.171 -3.368 -3.245 -3.229 0.345 -2.243 -3.778 2.018 -2.933 -3.264 0.683 -3.633 -1.264 1.290 -3.514 2.320 -2.174 ML 111 109 6 114 4 1 1 48 67 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 112 109 6 114 4 1 1 47 67 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 113 109 6 114 4 0 0 45 65 -12.737 -14.007 -2.036 -0.404 IL 114 114 5 114 4 1 1 48 67 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 115 115 6 115 3 1 1 48 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 49 - C - - MR 116 115 6 118 3 1 1 46 66 -7.987 -0.188 -3.082 -0.845 1.254 -1.620 -0.449 D 117 115 6 118 3 0 0 45 64 -6.390 -1.568 -0.620 IR 118 118 3 118 3 1 1 47 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 48 - a - - MR 119 118 3 121 5 1 1 45 65 -6.607 -0.055 -6.422 -6.634 -7.526 0.894 -0.971 -0.196 -0.398 D 120 118 3 121 5 0 0 44 64 -5.818 -0.475 -3.445 -4.876 -2.870 IR 121 121 3 121 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 19 47 u a - - MP 122 121 3 126 6 2 2 44 64 -8.957 -8.896 -0.023 -7.673 -7.953 -8.348 -3.494 -3.271 -3.400 0.373 -2.510 -4.022 1.796 -3.148 -3.416 0.778 -3.819 -1.184 2.833 -3.662 -0.204 -2.297 ML 123 121 3 126 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 124 121 3 126 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 125 121 3 126 6 0 0 40 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 126 126 5 126 6 1 1 44 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 127 127 6 127 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 20 46 a u - - MP 128 127 6 132 6 2 2 42 62 -8.957 -8.896 -0.023 -7.673 -7.953 -8.348 -3.245 -2.431 -3.292 2.784 -3.358 -4.392 0.916 -3.358 -3.215 1.688 -3.732 -0.013 0.489 -3.670 -1.032 -2.166 ML 129 127 6 132 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 130 127 6 132 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 131 127 6 132 6 0 0 38 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 132 132 5 132 6 1 1 42 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 133 133 6 133 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 21 45 a u - - MP 134 133 6 138 6 2 2 40 60 -8.957 -8.896 -0.023 -7.673 -7.953 -8.348 -3.245 -2.431 -3.292 2.784 -3.358 -4.392 0.916 -3.358 -3.215 1.688 -3.732 -0.013 0.489 -3.670 -1.032 -2.166 ML 135 133 6 138 6 1 1 39 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 136 133 6 138 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 137 133 6 138 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 138 138 5 138 6 1 1 40 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 139 139 6 139 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 22 44 u a - - MP 140 139 6 144 6 2 2 38 58 -8.957 -8.896 -0.023 -7.673 -7.953 -8.348 -3.494 -3.271 -3.400 0.373 -2.510 -4.022 1.796 -3.148 -3.416 0.778 -3.819 -1.184 2.833 -3.662 -0.204 -2.297 ML 141 139 6 144 6 1 1 37 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 142 139 6 144 6 1 1 37 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 143 139 6 144 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 144 144 5 144 6 1 1 38 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 145 145 6 145 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 23 43 u a - - MP 146 145 6 150 4 2 2 36 56 -6.515 -6.722 -0.072 -5.136 -2.597 -2.553 -2.687 0.865 -2.221 -3.454 1.870 -2.729 -2.722 1.181 -3.226 -0.723 2.038 -2.842 0.669 -0.723 ML 147 145 6 150 4 1 1 37 56 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 148 145 6 150 4 1 1 36 56 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 149 145 6 150 4 0 0 35 55 -4.568 -4.250 -2.265 -0.520 IL 150 150 5 150 4 1 1 38 58 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 151 151 6 151 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 24 - U - - - ML 152 151 6 154 3 1 1 34 53 -7.567 -0.027 -6.221 -0.796 -0.925 -1.482 1.344 D 153 151 6 154 3 0 0 32 52 -6.174 -1.687 -0.566 IL 154 154 3 154 3 1 1 36 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 25 - U - - - ML 155 154 3 157 3 1 1 33 52 -7.567 -0.027 -6.221 -0.796 -0.925 -1.482 1.344 D 156 154 3 157 3 0 0 31 51 -6.174 -1.687 -0.566 IL 157 157 3 157 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 26 - U - - - ML 158 157 3 160 3 1 1 32 51 -7.567 -0.027 -6.221 -0.796 -0.925 -1.482 1.344 D 159 157 3 160 3 0 0 30 50 -6.174 -1.687 -0.566 IL 160 160 3 160 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 27 - a - - - ML 161 160 3 163 3 1 1 30 50 -7.567 -0.027 -6.221 0.753 -0.763 -0.850 0.228 D 162 160 3 163 3 0 0 29 49 -6.174 -1.687 -0.566 IL 163 163 3 163 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 28 - U - - - ML 164 163 3 166 3 1 1 29 49 -7.567 -0.305 -2.434 -0.796 -0.925 -1.482 1.344 D 165 163 3 166 3 0 0 28 47 -6.174 -1.687 -0.566 IL 166 166 3 166 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 29 - a - - - ML 167 166 3 169 3 1 1 28 48 -7.295 -0.033 -5.950 0.288 0.213 -0.749 0.035 D 168 166 3 169 3 0 0 27 46 -7.315 -2.828 -0.230 IL 169 169 3 169 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 30 - A - - - ML 170 169 3 172 3 1 1 27 46 -7.295 -0.033 -5.950 1.209 -1.114 -0.858 -0.569 D 171 169 3 172 3 0 0 26 45 -7.315 -0.541 -1.707 IL 172 172 3 172 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 31 - G - - - ML 173 172 3 175 3 1 1 26 45 -7.567 -0.027 -6.221 -0.749 -1.816 1.426 -1.202 D 174 172 3 175 3 0 0 25 44 -6.174 -1.687 -0.566 IL 175 175 3 175 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 32 - A - - - ML 176 175 3 178 3 1 1 25 44 -7.567 -0.027 -6.221 1.480 -1.597 -1.305 -1.074 D 177 175 3 178 3 0 0 24 43 -6.174 -1.687 -0.566 IL 178 178 3 178 3 1 1 27 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 33 - G - - - ML 179 178 3 181 3 1 1 24 43 -7.567 -0.027 -6.221 -0.749 -1.816 1.426 -1.202 D 180 178 3 181 3 0 0 23 42 -6.174 -1.687 -0.566 IL 181 181 3 181 3 1 1 26 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 34 - a - - - ML 182 181 3 184 3 1 1 23 42 -7.567 -0.027 -6.221 0.877 -1.082 -0.022 -0.502 D 183 181 3 184 3 0 0 22 41 -6.174 -1.687 -0.566 IL 184 184 3 184 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 35 - C - - - ML 185 184 3 187 3 1 1 22 40 -7.567 -0.027 -6.221 -0.845 1.254 -1.620 -0.449 D 186 184 3 187 3 0 0 20 39 -6.174 -1.687 -0.566 IL 187 187 3 187 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 36 - C - - - ML 188 187 3 190 3 1 1 20 39 -7.567 -0.027 -6.221 -0.845 1.254 -1.620 -0.449 D 189 187 3 190 3 0 0 19 38 -6.174 -1.687 -0.566 IL 190 190 3 190 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 37 - G - - - ML 191 190 3 193 3 1 1 19 38 -7.567 -0.027 -6.221 -0.749 -1.816 1.426 -1.202 D 192 190 3 193 3 0 0 18 37 -6.174 -1.687 -0.566 IL 193 193 3 193 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 38 - a - - - ML 194 193 3 196 3 1 1 18 36 -7.567 -0.027 -6.221 0.317 -0.424 -0.136 0.137 D 195 193 3 196 3 0 0 17 36 -6.174 -1.687 -0.566 IL 196 196 3 196 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 39 - c - - - ML 197 196 3 199 3 1 1 16 35 -7.567 -0.027 -6.221 0.293 0.389 -0.930 -0.089 D 198 196 3 199 3 0 0 16 35 -6.174 -1.687 -0.566 IL 199 199 3 199 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 40 - G - - - ML 200 199 3 202 3 1 1 15 34 -7.567 -0.027 -6.221 -0.749 -1.816 1.426 -1.202 D 201 199 3 202 3 0 0 15 33 -6.174 -1.687 -0.566 IL 202 202 3 202 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 41 - A - - - ML 203 202 3 205 3 1 1 13 32 -7.567 -0.027 -6.221 1.480 -1.597 -1.305 -1.074 D 204 202 3 205 3 0 0 13 32 -6.174 -1.687 -0.566 IL 205 205 3 205 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 42 - u - - - ML 206 205 3 208 2 1 1 1 1 * 0.000 0.080 -0.106 -0.481 0.376 D 207 205 3 208 2 0 0 0 0 * 0.000 IL 208 208 3 208 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 53 ] - - - - - - E 209 208 3 -1 0 0 0 0 0 [ BEGR 54 ] - - - - - - S 210 6 1 211 3 0 0 40 60 -7.567 -0.027 -6.221 IL 211 211 2 211 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 68 - C - - - ML 212 211 2 214 3 1 1 40 60 -7.567 -0.027 -6.221 -0.845 1.254 -1.620 -0.449 D 213 211 2 214 3 0 0 39 58 -6.174 -1.687 -0.566 IL 214 214 3 214 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 69 - A - - - ML 215 214 3 217 3 1 1 39 59 -7.567 -0.027 -6.221 1.480 -1.597 -1.305 -1.074 D 216 214 3 217 3 0 0 38 57 -6.174 -1.687 -0.566 IL 217 217 3 217 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 70 - A - - - ML 218 217 3 220 3 1 1 38 57 -7.567 -0.122 -3.721 1.480 -1.597 -1.305 -1.074 D 219 217 3 220 3 0 0 37 56 -6.174 -1.687 -0.566 IL 220 220 3 220 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 71 - A - - - ML 221 220 3 223 5 1 1 37 56 -6.676 -0.052 -6.491 -6.703 -7.595 1.016 -1.069 -0.329 -0.503 D 222 220 3 223 5 0 0 36 55 -5.277 -1.121 -4.539 -1.597 -2.826 IL 223 223 3 223 5 1 1 37 57 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 59 ] 72 92 c g - - MP 224 223 3 228 6 2 2 36 55 -8.926 -8.865 -0.024 -7.641 -7.921 -8.316 0.199 -2.121 -2.322 1.105 -2.105 -3.119 1.703 -2.509 -2.366 1.432 -2.885 -0.365 1.671 -2.468 -0.067 -1.448 ML 225 223 3 228 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 226 223 3 228 6 1 1 35 54 -7.280 -6.009 -1.158 -5.988 -1.121 -4.201 0.853 -0.731 -0.460 -0.211 D 227 223 3 228 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 228 228 5 228 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 229 229 6 229 5 1 1 35 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 60 ] 73 91 C G - - MP 230 229 6 234 6 2 2 34 53 -8.957 -8.896 -0.023 -7.673 -7.953 -8.348 -3.808 -3.627 -3.613 0.056 -2.522 -4.118 3.228 -3.251 -3.647 0.448 -3.977 -1.566 1.053 -3.919 -0.220 -2.516 ML 231 229 6 234 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 232 229 6 234 6 1 1 32 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 233 229 6 234 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 234 234 5 234 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 235 235 6 235 5 1 1 33 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 61 ] 74 90 g u - - MP 236 235 6 240 6 2 2 32 51 -8.957 -8.896 -0.023 -7.673 -7.953 -8.348 -3.165 -2.154 -3.286 1.364 -3.628 -4.398 0.670 -3.380 -3.094 1.957 -3.598 2.358 0.307 -3.674 -1.266 -2.101 ML 237 235 6 240 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 238 235 6 240 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 239 235 6 240 6 0 0 28 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 240 240 5 240 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 241 241 6 241 5 1 1 31 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 62 ] 75 89 g u - - MP 242 241 6 246 6 2 2 30 49 -8.957 -8.896 -0.023 -7.673 -7.953 -8.348 -3.165 -2.154 -3.286 1.364 -3.628 -4.398 0.670 -3.380 -3.094 1.957 -3.598 2.358 0.307 -3.674 -1.266 -2.101 ML 243 241 6 246 6 1 1 29 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 244 241 6 246 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 245 241 6 246 6 0 0 27 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 246 246 5 246 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 247 247 6 247 5 1 1 29 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 63 ] 76 88 a u - - MP 248 247 6 252 4 2 2 28 47 -6.515 -6.722 -0.072 -5.136 -3.245 -2.431 -3.292 2.784 -3.358 -4.392 0.916 -3.358 -3.215 1.688 -3.732 -0.013 0.489 -3.670 -1.032 -2.166 ML 249 247 6 252 4 1 1 28 48 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 250 247 6 252 4 1 1 28 47 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 251 247 6 252 4 0 0 27 46 -4.568 -4.250 -2.265 -0.520 IL 252 252 5 252 4 1 1 30 49 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 253 253 6 253 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 77 - G - - - ML 254 253 6 256 3 1 1 25 44 -7.987 -0.024 -6.305 -0.749 -1.816 1.426 -1.202 D 255 253 6 256 3 0 0 24 43 -5.620 -0.734 -1.403 IL 256 256 3 256 3 1 1 26 45 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 65 ] - 87 - G - - MR 257 256 3 259 5 1 1 24 43 -6.753 -0.050 -6.569 -6.781 -7.672 -0.749 -1.816 1.426 -1.202 D 258 256 3 259 5 0 0 23 42 -5.352 -0.707 -2.978 -4.409 -2.404 IR 259 259 3 259 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 66 ] 78 86 a u - - MP 260 259 3 264 4 2 2 23 42 -6.515 -6.722 -0.072 -5.136 -3.245 -2.431 -3.292 2.784 -3.358 -4.392 0.916 -3.358 -3.215 1.688 -3.732 -0.013 0.489 -3.670 -1.032 -2.166 ML 261 259 3 264 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 262 259 3 264 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 263 259 3 264 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 264 264 5 264 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 265 265 6 265 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 79 - G - - - ML 266 265 6 268 3 1 1 20 39 -7.567 -0.027 -6.221 -0.749 -1.816 1.426 -1.202 D 267 265 6 268 3 0 0 19 38 -6.174 -1.687 -0.566 IL 268 268 3 268 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 80 - A - - - ML 269 268 3 271 3 1 1 19 38 -7.567 -0.027 -6.221 1.480 -1.597 -1.305 -1.074 D 270 268 3 271 3 0 0 18 37 -6.174 -1.687 -0.566 IL 271 271 3 271 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 81 - A - - - ML 272 271 3 274 3 1 1 18 36 -7.567 -0.027 -6.221 1.107 -1.171 -0.418 -0.613 D 273 271 3 274 3 0 0 17 36 -6.174 -1.687 -0.566 IL 274 274 3 274 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 82 - A - - - ML 275 274 3 277 3 1 1 16 35 -7.567 -0.027 -6.221 1.480 -1.597 -1.305 -1.074 D 276 274 3 277 3 0 0 16 35 -6.174 -1.687 -0.566 IL 277 277 3 277 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 83 - c - - - ML 278 277 3 280 3 1 1 15 34 -7.567 -0.027 -6.221 -0.535 0.857 -1.298 0.127 D 279 277 3 280 3 0 0 15 33 -6.174 -1.687 -0.566 IL 280 280 3 280 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 84 - U - - - ML 281 280 3 283 3 1 1 13 32 -7.567 -0.027 -6.221 -0.796 -0.925 -1.482 1.344 D 282 280 3 283 3 0 0 13 32 -6.174 -1.687 -0.566 IL 283 283 3 283 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 73 ] 85 - A - - - ML 284 283 3 286 2 1 1 1 1 * 0.000 1.480 -1.597 -1.305 -1.074 D 285 283 3 286 2 0 0 0 0 * 0.000 IL 286 286 3 286 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 74 ] - - - - - - E 287 286 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME PssrA ACC RF02797 DESC Plasmid-encoded Shigella sRNA A LENG 93 MAXL 191 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 19:08:50 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02797/CM NSEQ 6 EFFN 1.614258 CKSUM 3647899667 STATS LOCAL MSV -8.7314 0.71863 STATS LOCAL VITERBI -10.0981 0.71863 STATS LOCAL FORWARD -2.9236 0.71863 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.24036 1.61316 1.27753 1.45784 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 0.00000 * 1 2.58690 1.62454 2.28228 0.46889 1 U - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 2 2.34636 2.83919 0.24295 2.78876 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 3 2.29637 3.11151 0.23997 2.68539 3 G - - - 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 4 2.81565 0.35525 2.54073 1.83052 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 5 2.57962 1.62460 2.27974 0.47017 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 6 2.34354 2.83649 0.24381 2.78479 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 7 2.10239 0.53531 2.12013 1.75835 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 8 2.33648 2.82971 0.24597 2.77488 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 9 0.23652 2.85624 2.61862 2.52267 9 A - - - 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 10 0.23652 2.85624 2.61862 2.52267 10 A - - - 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 11 0.23652 2.85624 2.61862 2.52267 11 A - - - 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 12 0.23652 2.85624 2.61862 2.52267 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 13 2.34031 2.83338 0.24480 2.78024 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 14 0.53626 2.34096 1.52570 2.28902 14 A - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 15 1.66898 2.31976 0.51092 2.17754 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 16 1.70623 1.52546 1.47871 0.98618 16 u - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 17 2.59082 1.40477 2.33087 0.54058 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 18 2.59048 1.40480 2.33074 0.54064 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 19 2.53905 1.62496 2.26533 0.47748 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 20 0.53928 2.33433 1.52565 2.27810 20 A - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 21 0.53798 2.33718 1.52567 2.28279 21 A - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 22 2.57144 1.62467 2.27686 0.47162 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 23 1.96249 1.39986 1.73592 0.82869 23 u - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 24 2.25843 2.28417 2.75804 0.31442 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 25 2.25843 2.28417 2.75804 0.31442 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 26 2.25843 2.28417 2.75804 0.31442 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 27 0.80927 1.99918 2.07776 1.22363 27 a - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 28 2.25843 2.28417 2.75804 0.31442 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.31478 3.70530 1.40463 1.46634 0.26236 1.09861 0.40547 29 1.19713 1.14382 1.99085 1.41568 29 c - - _ 1.38629 1.38629 1.38629 1.38629 0.06521 3.45572 3.45572 1.46634 0.26236 2.48331 0.08716 30 0.41836 2.37060 2.17913 2.00017 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06521 3.45572 3.45572 1.46634 0.26236 0.18264 1.79016 31 2.29637 3.11151 0.23997 2.68539 31 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 32 0.23652 2.85624 2.61862 2.52267 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 33 2.29637 3.11151 0.23997 2.68539 33 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 34 0.70733 2.28446 1.37101 1.88809 34 a - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 35 2.38571 0.32409 2.94851 2.02212 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 36 2.38571 0.32409 2.94851 2.02212 36 C - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 37 2.29637 3.11151 0.23997 2.68539 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 38 1.16598 1.69364 1.44237 1.31614 38 a - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 39 1.18550 1.00524 2.16287 1.54433 39 c - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 40 2.29637 3.11151 0.23997 2.68539 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 41 0.23652 2.85624 2.61862 2.52267 41 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 42 1.35569 1.42973 1.72545 1.12466 42 u - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 43 1.19587 1.90004 1.05308 1.61377 43 g - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 44 0.53639 2.45407 1.46126 2.33042 44 A - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 45 2.51468 1.77728 2.15534 0.45547 45 U - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 46 2.51366 1.77723 2.15503 0.45567 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 47 0.53688 2.45272 1.46132 2.32850 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.21988 3.70530 1.75566 1.46634 0.26236 1.09861 0.40547 48 0.69266 2.17648 1.52329 1.78187 48 A - - - 1.38629 1.38629 1.38629 1.38629 0.05948 3.54489 3.54489 1.46634 0.26236 0.25049 1.50697 49 2.38571 0.32409 2.94851 2.02212 49 C - - - 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 50 1.89417 2.50158 0.39823 2.34245 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 51 1.89442 2.50187 0.39808 2.34283 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 52 1.51351 1.53931 1.33071 1.20050 52 u - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 53 2.41589 0.59071 2.13071 1.43538 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 54 2.52424 1.77770 2.15818 0.45363 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 55 3.01090 0.28391 2.66911 2.05102 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 56 0.23652 2.85624 2.61862 2.52267 56 A - - - 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 57 2.29637 3.11151 0.23997 2.68539 57 G - - - 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 58 2.29637 3.11151 0.23997 2.68539 58 G - - - 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 59 3.00129 0.28521 2.66536 2.04915 59 C - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 60 2.00251 2.28713 0.43135 2.17318 60 G - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 61 0.23652 2.85624 2.61862 2.52267 61 A - - - 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 62 3.00665 0.28448 2.66746 2.05019 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 63 0.53503 2.45779 1.46109 2.33571 63 A - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 64 2.10736 2.71166 0.30611 2.58081 64 G - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 65 2.29637 3.11151 0.23997 2.68539 65 G - - - 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 66 2.99490 0.28608 2.66285 2.04790 66 C - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 67 0.53688 2.45273 1.46132 2.32851 67 A - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 68 2.38571 0.32409 2.94851 2.02212 68 C - - - 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 69 0.23652 2.85624 2.61862 2.52267 69 A - - - 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 70 0.23652 2.85624 2.61862 2.52267 70 A - - - 1.38629 1.38629 1.38629 1.38629 0.13997 3.70530 2.24407 1.46634 0.26236 1.09861 0.40547 71 0.59619 2.27159 1.63739 1.88745 71 A - - - 1.38629 1.38629 1.38629 1.38629 0.05503 3.62036 3.62036 1.46634 0.26236 1.84233 0.17251 72 1.36023 1.47592 1.55513 1.19182 72 u - - < 1.38629 1.38629 1.38629 1.38629 0.05503 3.62036 3.62036 1.46634 0.26236 0.38111 1.14918 73 2.81066 0.35608 2.53870 1.82976 73 C - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 74 1.76286 2.50456 0.42150 2.40049 74 G - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 75 1.76311 2.50494 0.42131 2.40104 75 G - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 76 0.53666 2.34009 1.52569 2.28758 76 A - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 77 2.29637 3.11151 0.23997 2.68539 77 G - - - 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 78 0.53676 2.33986 1.52569 2.28720 78 A - - < 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 79 2.29637 3.11151 0.23997 2.68539 79 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 80 0.23652 2.85624 2.61862 2.52267 80 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 81 0.52686 2.37124 1.71215 1.99732 81 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 82 0.23652 2.85624 2.61862 2.52267 82 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 83 1.96745 0.64127 2.52177 1.37340 83 C - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 84 2.25843 2.28417 2.75804 0.31442 84 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 85 0.23652 2.85624 2.61862 2.52267 85 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 86 2.52543 1.77775 2.15853 0.45340 86 U - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 87 2.29637 3.11151 0.23997 2.68539 87 G - - - 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 88 2.50990 1.77707 2.15391 0.45640 88 U - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 89 2.60391 1.59328 2.30657 0.47296 89 U - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 90 2.59169 1.59349 2.30220 0.47505 90 U - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 91 2.07878 2.67921 0.31850 2.53753 91 G - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 92 1.03940 1.73687 1.31042 1.60666 92 a - - > 1.38629 1.38629 1.38629 1.38629 0.05044 3.70530 3.70530 1.46634 0.26236 1.09861 0.40547 93 0.23652 2.85624 2.61862 2.52267 93 A - - : 1.38629 1.38629 1.38629 1.38629 0.02554 3.68040 * 1.46634 0.26236 0.00000 * //