INFERNAL1/a [1.1.4 | Dec 2020] NAME ES173 ACC RF02753 DESC ES173 sRNA STATES 196 NODES 53 CLEN 64 W 80 ALPH RNA RF no CONS yes MAP yes DATE Wed Mar 15 12:16:42 2017 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 1.800781 CKSUM 4191052751 NULL 0.000 0.000 0.000 0.000 GA 90.00 TC 92.90 NC 74.30 EFP7GF -8.4610 0.71911 ECMLC 0.58933 -8.56092 2.44538 1600000 787309 0.001524 ECMGC 0.41828 -17.60583 -3.02918 1600000 177837 0.002249 ECMLI 0.59080 -5.91212 3.99392 1600000 417719 0.002873 ECMGI 0.45891 -12.45293 -0.02134 1600000 120139 0.003329 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 80 100 -6.894 -7.101 -0.055 -5.515 IL 1 1 2 1 4 1 20 84 104 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 20 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 20 80 100 -7.915 -0.021 -6.569 -1.394 -1.407 -2.123 1.591 D 4 2 3 5 3 0 14 79 99 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 19 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 19 79 99 -7.915 -0.021 -6.569 -1.394 -1.407 -2.123 1.591 D 7 5 3 8 3 0 14 78 97 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 18 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 3 1 18 78 98 -7.915 -0.021 -6.569 -1.394 -1.407 -2.123 1.591 D 10 8 3 11 3 0 13 77 96 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 17 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 1 17 77 97 -7.915 -0.021 -6.569 -1.394 -1.407 -2.123 1.591 D 13 11 3 14 3 0 12 75 95 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 17 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 1 16 76 96 -7.915 -0.021 -6.569 -1.394 -1.407 -2.123 1.591 D 16 14 3 17 3 0 11 74 94 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 16 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 1 15 75 94 -7.915 -0.021 -6.569 1.035 -0.367 -1.102 -0.495 D 19 17 3 20 3 0 10 73 93 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 15 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - C - - - ML 21 20 3 23 3 1 15 74 93 -7.915 -0.021 -6.569 -1.621 1.590 -2.441 -1.059 D 22 20 3 23 3 0 10 72 92 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 14 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - g - - - ML 24 23 3 26 3 1 14 73 92 -7.915 -0.021 -6.569 -0.483 -1.214 0.933 -0.083 D 25 23 3 26 3 0 9 71 91 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 13 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - C - - - ML 27 26 3 29 3 1 13 72 91 -7.915 -0.021 -6.569 -1.621 1.590 -2.441 -1.059 D 28 26 3 29 3 0 8 70 90 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 12 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - C - - - ML 30 29 3 32 3 1 12 71 90 -7.915 -0.021 -6.569 -1.621 1.590 -2.441 -1.059 D 31 29 3 32 3 0 7 69 89 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 12 73 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - U - - - ML 33 32 3 35 3 1 11 70 89 -7.915 -0.021 -6.569 -1.394 -1.407 -2.123 1.591 D 34 32 3 35 3 0 6 68 88 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 11 72 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - C - - - ML 36 35 3 38 3 1 10 68 88 -7.915 -0.021 -6.569 -1.621 1.590 -2.441 -1.059 D 37 35 3 38 3 0 5 67 87 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 10 71 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - A - - - ML 39 38 3 41 3 1 9 67 87 -8.308 -0.019 -6.626 1.696 -2.271 -1.913 -1.804 D 40 38 3 41 3 0 4 66 86 -5.620 -0.734 -1.403 IL 41 41 3 41 3 1 8 68 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 65 - C - - MR 42 41 3 44 3 1 9 66 86 -8.308 -0.019 -6.626 -1.621 1.590 -2.441 -1.059 D 43 41 3 44 3 0 3 65 84 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 8 67 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 64 - C - - MR 45 44 3 47 3 1 8 65 85 -8.308 -0.019 -6.626 -1.621 1.590 -2.441 -1.059 D 46 44 3 47 3 0 2 64 83 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 7 66 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 63 - A - - MR 48 47 3 50 3 1 7 64 84 -8.308 -0.019 -6.626 1.696 -2.271 -1.913 -1.804 D 49 47 3 50 3 0 1 63 82 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 6 65 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 62 - C - - MR 51 50 3 53 3 1 6 63 83 -8.308 -0.019 -6.626 -1.621 1.590 -2.441 -1.059 D 52 50 3 53 3 0 1 62 81 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 5 64 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 61 - U - - MR 54 53 3 56 3 1 6 62 82 -8.308 -0.019 -6.626 -1.394 -1.407 -2.123 1.591 D 55 53 3 56 3 0 0 61 80 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 4 63 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 60 - C - - MR 57 56 3 59 3 1 5 61 81 -8.308 -0.019 -6.626 -1.621 1.590 -2.441 -1.059 D 58 56 3 59 3 0 0 60 79 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 4 62 82 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 59 - c - - MR 60 59 3 62 3 1 5 60 80 -8.308 -0.019 -6.626 0.074 0.783 -1.276 -0.296 D 61 59 3 62 3 0 0 59 78 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 3 61 81 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 58 - A - - MR 63 62 3 65 3 1 4 59 79 -8.308 -0.019 -6.626 1.696 -2.271 -1.913 -1.804 D 64 62 3 65 3 0 0 58 77 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 3 60 80 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 57 - C - - MR 66 65 3 68 3 1 4 58 78 -8.308 -0.019 -6.626 -1.621 1.590 -2.441 -1.059 D 67 65 3 68 3 0 0 57 76 -6.390 -1.568 -0.620 IR 68 68 3 68 3 1 2 59 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 56 - A - - MR 69 68 3 71 3 1 3 57 77 -8.308 -0.019 -6.626 1.035 -0.367 -1.102 -0.495 D 70 68 3 71 3 0 0 56 75 -6.390 -1.568 -0.620 IR 71 71 3 71 3 1 2 58 78 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 55 - A - - MR 72 71 3 74 3 1 3 56 76 -8.308 -0.019 -6.626 1.696 -2.271 -1.913 -1.804 D 73 71 3 74 3 0 0 55 74 -6.390 -1.568 -0.620 IR 74 74 3 74 3 1 1 57 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 54 - C - - MR 75 74 3 77 3 1 2 55 75 -8.308 -0.019 -6.626 -1.621 1.590 -2.441 -1.059 D 76 74 3 77 3 0 0 54 73 -6.390 -1.568 -0.620 IR 77 77 3 77 3 1 1 56 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 53 - A - - MR 78 77 3 80 3 1 2 54 74 -8.308 -0.019 -6.626 1.696 -2.271 -1.913 -1.804 D 79 77 3 80 3 0 0 53 72 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 1 55 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 52 - C - - MR 81 80 3 83 5 1 1 53 73 -7.050 -0.040 -6.866 -7.078 -7.969 -1.621 1.590 -2.441 -1.059 D 82 80 3 83 5 0 0 52 71 -5.352 -0.707 -2.978 -4.409 -2.404 IR 83 83 3 83 5 1 1 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 14 51 A U - - MP 84 83 3 88 6 2 2 52 72 -9.087 -9.026 -0.021 -7.803 -8.083 -8.478 -3.712 -2.764 -3.736 3.278 -4.035 -5.090 0.260 -3.783 -3.631 1.165 -4.175 -0.253 -0.158 -4.291 -1.681 -2.575 ML 85 83 3 88 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 3 88 6 1 1 51 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 3 88 6 0 0 48 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 15 50 A U - - MP 90 89 6 94 6 2 2 50 70 -9.087 -9.026 -0.021 -7.803 -8.083 -8.478 -3.712 -2.764 -3.736 3.278 -4.035 -5.090 0.260 -3.783 -3.631 1.165 -4.175 -0.253 -0.158 -4.291 -1.681 -2.575 ML 91 89 6 94 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 1 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 46 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 16 49 C G - - MP 96 95 6 100 6 2 2 48 68 -9.087 -9.026 -0.021 -7.803 -8.083 -8.478 -4.452 -4.349 -4.158 -0.590 -2.898 -4.583 3.520 -3.698 -4.205 -0.336 -4.476 -2.295 0.626 -4.528 -0.602 -3.048 ML 97 95 6 100 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 17 48 U A - - MP 102 101 6 106 6 2 2 46 66 -9.087 -9.026 -0.021 -7.803 -8.083 -8.478 -4.089 -3.911 -3.938 -0.213 -2.902 -4.512 1.424 -3.591 -3.944 0.056 -4.322 -1.813 3.277 -4.244 -0.581 -2.778 ML 103 101 6 106 6 1 1 46 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 45 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 46 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 18 47 U A - - MP 108 107 6 112 4 2 2 44 64 -6.894 -7.101 -0.055 -5.515 -4.089 -3.911 -3.938 -0.213 -2.902 -4.512 1.424 -3.591 -3.944 0.056 -4.322 -1.813 3.277 -4.244 -0.581 -2.778 ML 109 107 6 112 4 1 1 45 64 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 4 1 1 44 64 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 111 107 6 112 4 0 0 43 63 -4.568 -4.250 -2.265 -0.520 IL 112 112 5 112 4 1 1 46 66 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 113 113 6 113 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 19 - U - - - ML 114 113 6 116 3 1 1 42 61 -7.915 -0.021 -6.569 -1.394 -1.407 -2.123 1.591 D 115 113 6 116 3 0 0 41 60 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 20 - C - - - ML 117 116 3 119 3 1 1 41 60 -8.308 -0.019 -6.626 -1.621 1.590 -2.441 -1.059 D 118 116 3 119 3 0 0 40 59 -5.620 -0.734 -1.403 IL 119 119 3 119 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 35 ] - 46 - U - - MR 120 119 3 122 3 1 1 40 59 -8.308 -0.019 -6.626 -1.394 -1.407 -2.123 1.591 D 121 119 3 122 3 0 0 38 57 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 45 - U - - MR 123 122 3 125 5 1 1 39 58 -7.050 -0.040 -6.866 -7.078 -7.969 -1.394 -1.407 -2.123 1.591 D 124 122 3 125 5 0 0 37 57 -5.352 -0.707 -2.978 -4.409 -2.404 IR 125 125 3 125 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 21 44 G C - - MP 126 125 3 130 6 2 2 38 57 -9.087 -9.026 -0.021 -7.803 -8.083 -8.478 -4.648 -3.049 -4.739 0.262 -5.101 -4.657 -0.489 -4.975 -4.266 3.615 -4.610 -0.745 -0.877 -4.406 -2.521 -3.617 ML 127 125 3 130 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 3 130 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 3 130 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 37 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 22 43 U A - - MP 132 131 6 136 6 2 2 36 55 -9.087 -9.026 -0.021 -7.803 -8.083 -8.478 -4.089 -3.911 -3.938 -0.213 -2.902 -4.512 1.424 -3.591 -3.944 0.056 -4.322 -1.813 3.277 -4.244 -0.581 -2.778 ML 133 131 6 136 6 1 1 34 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 34 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 35 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 23 42 u g - - MP 138 137 6 142 6 2 2 34 53 -9.087 -9.026 -0.021 -7.803 -8.083 -8.478 -3.991 -3.907 -3.716 -0.252 -2.505 -4.158 1.779 -3.268 -3.755 -0.042 -4.058 -1.912 0.944 -4.086 2.939 -2.632 ML 139 137 6 142 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 24 41 U A - - MP 144 143 6 148 4 2 2 32 51 -6.894 -7.101 -0.055 -5.515 -4.089 -3.911 -3.938 -0.213 -2.902 -4.512 1.424 -3.591 -3.944 0.056 -4.322 -1.813 3.277 -4.244 -0.581 -2.778 ML 145 143 6 148 4 1 1 32 52 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 4 1 1 32 51 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 147 143 6 148 4 0 0 31 50 -4.568 -4.250 -2.265 -0.520 IL 148 148 5 148 4 1 1 34 53 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 149 149 6 149 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 25 - U - - - ML 150 149 6 152 3 1 1 29 48 -7.915 -0.021 -6.569 -1.394 -1.407 -2.123 1.591 D 151 149 6 152 3 0 0 28 47 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 26 - u - - - ML 153 152 3 155 5 1 1 28 47 -7.050 -0.040 -6.866 -7.078 -7.969 -0.666 0.428 -1.438 0.727 D 154 152 3 155 5 0 0 27 45 -4.959 -0.803 -4.221 -2.596 -2.508 IL 155 155 3 155 5 1 1 28 47 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 27 40 G C - - MP 156 155 3 160 6 2 2 27 46 -9.087 -9.026 -0.021 -7.803 -8.083 -8.478 -4.648 -3.049 -4.739 0.262 -5.101 -4.657 -0.489 -4.975 -4.266 3.615 -4.610 -0.745 -0.877 -4.406 -2.521 -3.617 ML 157 155 3 160 6 1 1 26 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 3 160 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 3 160 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 28 39 G C - - MP 162 161 6 166 6 2 2 25 44 -9.087 -9.026 -0.021 -7.803 -8.083 -8.478 -4.648 -3.049 -4.739 0.262 -5.101 -4.657 -0.489 -4.975 -4.266 3.615 -4.610 -0.745 -0.877 -4.406 -2.521 -3.617 ML 163 161 6 166 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 6 1 1 24 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 6 166 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 29 38 G U - - MP 168 167 6 172 6 2 2 23 42 -4.272 -9.026 -0.096 -7.803 -8.083 -8.478 -3.554 -2.348 -3.716 1.171 -4.381 -5.106 0.001 -3.748 -3.395 1.441 -3.913 3.015 -0.359 -4.327 -1.941 -2.430 ML 169 167 6 172 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 171 167 6 172 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 172 172 5 172 6 1 1 22 41 -3.148 -3.411 -0.466 -5.066 -5.842 -5.503 0.000 0.000 0.000 0.000 IR 173 173 6 173 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 31 37 c g - - MP 174 173 6 178 4 2 2 21 40 -6.894 -7.101 -0.055 -5.515 -3.705 -3.670 -3.551 0.031 -2.453 -4.080 2.972 -3.184 -3.574 0.262 -3.940 -1.704 1.165 -3.830 1.256 -2.452 ML 175 173 6 178 4 1 1 22 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 176 173 6 178 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 177 173 6 178 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 178 178 5 178 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 179 179 6 179 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 32 - A - - - ML 180 179 6 182 3 1 1 18 36 -7.915 -0.021 -6.569 1.696 -2.271 -1.913 -1.804 D 181 179 6 182 3 0 0 17 36 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 33 - U - - - ML 183 182 3 185 3 1 1 16 35 -7.915 -0.021 -6.569 -1.394 -1.407 -2.123 1.591 D 184 182 3 185 3 0 0 16 34 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 34 - U - - - ML 186 185 3 188 3 1 1 15 33 -7.915 -0.021 -6.569 -1.394 -1.407 -2.123 1.591 D 187 185 3 188 3 0 0 15 33 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 35 - U - - - ML 189 188 3 191 3 1 1 13 32 -7.915 -0.021 -6.569 -1.394 -1.407 -2.123 1.591 D 190 188 3 191 3 0 0 13 32 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 36 - C - - - ML 192 191 3 194 2 1 1 1 1 * 0.000 -1.621 1.590 -2.441 -1.059 D 193 191 3 194 2 0 0 0 0 * 0.000 IL 194 194 3 194 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 52 ] - - - - - - E 195 194 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME ES173 ACC RF02753 DESC ES173 sRNA LENG 64 MAXL 149 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Mar 15 12:16:42 2017 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED NSEQ 4 EFFN 2.230469 CKSUM 4191052751 STATS LOCAL MSV -8.3724 0.71911 STATS LOCAL VITERBI -8.9089 0.71911 STATS LOCAL FORWARD -3.4109 0.71911 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.49757 1.23607 1.83086 1.12231 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 0.00000 * 1 2.55932 2.53194 3.07461 0.22699 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 2 2.55932 2.53194 3.07461 0.22699 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 3 2.55932 2.53194 3.07461 0.22699 3 U - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 4 2.55932 2.53194 3.07461 0.22699 4 U - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 5 2.55932 2.53194 3.07461 0.22699 5 U - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 6 0.62457 1.63999 2.23413 1.81131 6 A - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 7 2.78062 0.21511 3.35594 2.33640 7 C - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 8 1.80702 2.32147 0.67550 1.47480 8 G - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 9 2.78062 0.21511 3.35594 2.33640 9 C - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 10 2.78062 0.21511 3.35594 2.33640 10 C - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 11 2.55932 2.53194 3.07461 0.22699 11 U - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 12 2.78062 0.21511 3.35594 2.33640 12 C - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 13 0.16434 3.18513 2.91454 2.88344 13 A - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 14 0.36546 2.70527 1.78479 2.63890 14 A - - < 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 15 0.36515 2.70638 1.78497 2.64052 15 A - - < 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 16 3.14097 0.25413 2.90894 2.06644 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 17 2.90929 1.85850 2.65282 0.32972 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 18 2.90878 1.85847 2.65261 0.32978 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 19 2.55932 2.53194 3.07461 0.22699 19 U - - - 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 20 2.78062 0.21511 3.35594 2.33640 20 C - - - 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 21 2.54910 3.18274 0.17874 3.12236 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 22 2.90949 1.85850 2.65291 0.32969 22 U - - < 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 23 2.89168 1.55025 2.67523 0.41033 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 24 2.90964 1.85851 2.65297 0.32967 24 U - - < 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 25 2.55932 2.53194 3.07461 0.22699 25 U - - - 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 26 1.93777 1.04816 2.48407 0.86277 26 u - - - 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 27 2.55159 3.18562 0.17815 3.12639 27 G - - < 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 28 2.55131 3.18530 0.17822 3.12594 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 29 1.89537 2.84387 0.32076 2.71896 29 G - - < 1.38629 1.38629 1.38629 1.38629 0.19746 1.84130 3.88366 0.24188 1.53781 1.09861 0.40547 30 2.63312 0.62751 2.40469 1.19095 31 C - - < 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 31 0.16434 3.18513 2.91454 2.88344 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 32 2.55932 2.53194 3.07461 0.22699 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 33 2.55932 2.53194 3.07461 0.22699 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 34 2.55932 2.53194 3.07461 0.22699 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 35 2.78062 0.21511 3.35594 2.33640 36 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 36 1.89904 2.56718 0.38149 2.40029 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 37 2.92701 1.86255 2.64201 0.32857 38 U - - > 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 38 3.32029 0.21171 3.01391 2.24851 39 C - - > 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 39 3.31137 0.21257 3.01000 2.24679 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 40 0.37406 2.83680 1.69548 2.66012 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 41 2.08697 2.85322 0.29210 2.63689 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 42 0.37359 2.83881 1.69565 2.66261 43 A - - > 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 43 3.34577 0.20929 3.02496 2.25337 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 44 2.55932 2.53194 3.07461 0.22699 45 U - - - 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 45 2.55932 2.53194 3.07461 0.22699 46 U - - - 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 46 0.37424 2.83602 1.69541 2.65915 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 47 0.37409 2.83667 1.69547 2.65996 48 A - - > 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 48 2.34498 3.07852 0.21914 2.90190 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 49 2.87412 2.07343 2.52109 0.30461 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 50 2.87720 2.07377 2.52222 0.30420 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 51 2.78062 0.21511 3.35594 2.33640 52 C - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 52 0.16434 3.18513 2.91454 2.88344 53 A - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 53 2.78062 0.21511 3.35594 2.33640 54 C - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 54 0.16434 3.18513 2.91454 2.88344 55 A - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 55 0.62457 1.63999 2.23413 1.81131 56 A - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 56 2.78062 0.21511 3.35594 2.33640 57 C - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 57 0.16434 3.18513 2.91454 2.88344 58 A - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 58 1.35664 0.77765 2.37215 1.66225 59 c - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 59 2.78062 0.21511 3.35594 2.33640 60 C - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 60 2.55932 2.53194 3.07461 0.22699 61 U - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 61 2.78062 0.21511 3.35594 2.33640 62 C - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 62 0.16434 3.18513 2.91454 2.88344 63 A - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 63 2.78062 0.21511 3.35594 2.33640 64 C - - : 1.38629 1.38629 1.38629 1.38629 0.04202 3.88366 3.88366 1.46634 0.26236 1.09861 0.40547 64 2.78062 0.21511 3.35594 2.33640 65 C - - : 1.38629 1.38629 1.38629 1.38629 0.02123 3.86287 * 1.46634 0.26236 0.00000 * //