INFERNAL1/a [1.1.4 | Dec 2020] NAME sca_ncR26 ACC RF02721 DESC Small Cajal body specific RNA ncR26 STATES 208 NODES 52 CLEN 68 W 84 ALPH RNA RF no CONS yes MAP yes DATE Wed Mar 1 14:52:51 2017 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.785156 CKSUM 1765097328 NULL 0.000 0.000 0.000 0.000 GA 37.00 TC 37.20 NC 36.60 EFP7GF -4.9956 0.72636 ECMLC 0.56347 -6.75975 4.09815 1600000 544828 0.002203 ECMGC 0.41432 -15.37092 -1.48292 1600000 126188 0.003170 ECMLI 0.54944 -4.03890 5.54786 1600000 232690 0.005157 ECMGI 0.44666 -9.82448 1.80951 1600000 72251 0.005536 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 84 105 -6.888 -7.095 -0.055 -5.509 IL 1 1 2 1 4 1 25 88 109 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 25 87 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 25 85 105 -7.908 -0.021 -6.562 -1.383 -1.398 -2.111 1.588 D 4 2 3 5 3 0 19 83 103 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 24 86 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 24 83 104 -7.908 -0.021 -6.562 -1.383 -1.398 -2.111 1.588 D 7 5 3 8 3 0 19 82 102 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 23 85 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 3 1 23 82 103 -7.908 -0.021 -6.562 -1.383 -1.398 -2.111 1.588 D 10 8 3 11 3 0 18 81 101 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 22 84 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 22 81 101 -7.908 -0.021 -6.562 -1.461 -2.662 1.695 -2.048 D 13 11 3 14 3 0 17 80 100 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 21 83 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 21 80 100 -7.908 -0.021 -6.562 1.694 -2.259 -1.902 -1.791 D 16 14 3 17 3 0 16 79 99 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 21 82 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - a - - - ML 18 17 3 20 3 1 20 79 99 -7.908 -0.021 -6.562 0.702 -1.347 0.473 -0.757 D 19 17 3 20 3 0 16 78 98 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 20 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 19 78 98 -7.908 -0.021 -6.562 1.694 -2.259 -1.902 -1.791 D 22 20 3 23 3 0 15 77 97 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 19 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 18 77 97 -7.908 -0.021 -6.562 1.694 -2.259 -1.902 -1.791 D 25 23 3 26 3 0 14 76 96 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 18 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - C - - - ML 27 26 3 29 3 1 18 76 96 -7.908 -0.021 -6.562 -1.606 1.586 -2.425 -1.048 D 28 26 3 29 3 0 13 75 95 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 17 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - u - - - ML 30 29 3 32 3 1 17 75 95 -7.908 -0.021 -6.562 -0.661 0.448 -1.434 0.708 D 31 29 3 32 3 0 13 74 94 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 17 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - u - - - ML 33 32 3 35 3 1 16 74 94 -8.303 -0.019 -6.620 -0.340 -0.908 0.308 0.525 D 34 32 3 35 3 0 12 73 93 -5.620 -0.734 -1.403 IL 35 35 3 35 3 1 15 75 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 68 - U - - MR 36 35 3 38 3 1 15 73 93 -8.303 -0.019 -6.620 -1.383 -1.398 -2.111 1.588 D 37 35 3 38 3 0 10 71 91 -6.390 -1.568 -0.620 IR 38 38 3 38 3 1 14 74 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 67 - U - - MR 39 38 3 41 3 1 14 72 92 -8.303 -0.019 -6.620 -1.383 -1.398 -2.111 1.588 D 40 38 3 41 3 0 9 71 90 -6.390 -1.568 -0.620 IR 41 41 3 41 3 1 14 73 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 66 - U - - MR 42 41 3 44 5 1 13 71 91 -7.045 -0.040 -6.860 -7.072 -7.964 -1.383 -1.398 -2.111 1.588 D 43 41 3 44 5 0 8 70 90 -5.352 -0.707 -2.978 -4.409 -2.404 IR 44 44 3 44 5 1 12 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 65 G C - - MP 45 44 3 49 6 2 13 70 90 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -4.636 -3.044 -4.726 0.270 -5.084 -4.652 -0.475 -4.961 -4.258 3.612 -4.603 -0.739 -0.863 -4.398 -2.506 -3.604 ML 46 44 3 49 6 1 9 69 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 3 49 6 1 7 69 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 3 49 6 0 5 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 11 70 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 10 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 64 a u - - MP 51 50 6 55 4 2 11 68 88 -6.888 -7.095 -0.055 -5.509 -2.755 -2.317 -2.876 2.179 -2.901 -3.854 1.023 -3.065 -2.864 1.443 -3.400 -0.148 0.700 -3.121 -0.782 1.298 ML 52 50 6 55 4 1 8 68 88 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 4 1 5 68 88 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 54 50 6 55 4 0 4 67 87 -4.568 -4.250 -2.265 -0.520 IL 55 55 5 55 4 1 10 70 90 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 56 56 6 56 3 1 9 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 14 - U - - - ML 57 56 6 59 3 1 9 66 85 -7.908 -0.021 -6.562 -1.383 -1.398 -2.111 1.588 D 58 56 6 59 3 0 4 64 84 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 8 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 15 - U - - - ML 60 59 3 62 3 1 8 65 84 -7.908 -0.021 -6.562 -1.383 -1.398 -2.111 1.588 D 61 59 3 62 3 0 3 63 83 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 8 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 16 - U - - - ML 63 62 3 65 3 1 8 64 83 -7.908 -0.021 -6.562 -1.383 -1.398 -2.111 1.588 D 64 62 3 65 3 0 2 62 82 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 7 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 17 - U - - - ML 66 65 3 68 3 1 7 63 82 -8.303 -0.019 -6.620 -1.383 -1.398 -2.111 1.588 D 67 65 3 68 3 0 2 61 81 -5.620 -0.734 -1.403 IL 68 68 3 68 3 1 5 63 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 63 - U - - MR 69 68 3 71 3 1 6 62 81 -8.303 -0.019 -6.620 -1.383 -1.398 -2.111 1.588 D 70 68 3 71 3 0 1 60 80 -6.390 -1.568 -0.620 IR 71 71 3 71 3 1 5 62 82 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 62 - U - - MR 72 71 3 74 5 1 6 61 80 -7.045 -0.040 -6.860 -7.072 -7.964 -1.383 -1.398 -2.111 1.588 D 73 71 3 74 5 0 0 59 79 -5.352 -0.707 -2.978 -4.409 -2.404 IR 74 74 3 74 5 1 3 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 18 61 G U - - MP 75 74 3 79 6 2 7 60 79 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -3.547 -2.343 -3.707 1.176 -4.367 -5.091 0.014 -3.740 -3.389 1.452 -3.906 3.006 -0.346 -4.314 -1.927 -2.423 ML 76 74 3 79 6 1 2 58 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 3 79 6 1 2 58 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 3 79 6 0 0 56 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 3 59 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 3 59 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 19 60 a u - - MP 81 80 6 85 6 2 6 58 77 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -2.552 -2.249 1.071 2.143 -2.704 -3.616 1.064 -2.918 -2.705 1.458 -3.246 -0.200 0.772 -2.890 -0.666 -1.763 ML 82 80 6 85 6 1 2 56 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 2 56 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 54 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 3 57 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 3 57 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 20 59 u a - - MP 87 86 6 91 6 2 5 56 75 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -2.777 -2.716 -2.850 0.678 -2.372 -3.612 1.677 -2.879 -2.884 0.938 -3.378 -0.864 2.165 -3.037 -0.214 1.130 ML 88 86 6 91 6 1 2 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 2 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 53 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 2 55 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 2 55 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 21 58 G U - - MP 93 92 6 97 4 2 3 54 73 -6.888 -7.095 -0.055 -5.509 -3.547 -2.343 -3.707 1.176 -4.367 -5.091 0.014 -3.740 -3.389 1.452 -3.906 3.006 -0.346 -4.314 -1.927 -2.423 ML 94 92 6 97 4 1 1 54 74 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 4 1 1 53 73 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 96 92 6 97 4 0 0 52 72 -4.568 -4.250 -2.265 -0.520 IL 97 97 5 97 4 1 2 55 75 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 98 98 6 98 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 22 - C - - - ML 99 98 6 101 5 1 2 51 70 -7.045 -0.040 -6.860 -7.072 -7.964 -1.606 1.586 -2.425 -1.048 D 100 98 6 101 5 0 0 50 69 -4.959 -0.803 -4.221 -2.596 -2.508 IL 101 101 3 101 5 1 1 51 71 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 23 57 g c - - MP 102 101 3 106 6 2 4 50 69 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -3.016 -2.430 -3.135 0.936 -3.203 -3.896 0.761 -3.369 0.972 2.736 -3.590 -0.294 0.447 -3.255 -1.053 -2.167 ML 103 101 3 106 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 3 106 6 1 1 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 3 106 6 0 0 46 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 49 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 24 56 C G - - MP 108 107 6 112 6 2 3 48 67 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -4.440 -4.335 -4.148 -0.578 -2.890 -4.574 3.516 -3.689 -4.194 -0.321 -4.466 -2.281 0.635 -4.516 -0.594 -3.037 ML 109 107 6 112 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 44 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 25 55 C G - - MP 114 113 6 118 4 2 2 46 65 -6.809 -8.054 -0.084 -4.508 -4.440 -4.335 -4.148 -0.578 -2.890 -4.574 3.516 -3.689 -4.194 -0.321 -4.466 -2.281 0.635 -4.516 -0.594 -3.037 ML 115 113 6 118 4 1 1 46 65 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 4 1 1 45 64 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 117 113 6 118 4 0 0 43 62 -12.737 -14.007 -2.036 -0.404 IL 118 118 5 118 4 1 1 46 65 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 119 119 6 119 3 1 1 46 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 54 - G - - MR 120 119 6 122 3 1 1 44 63 -8.303 -0.019 -6.620 -1.461 -2.662 1.695 -2.048 D 121 119 6 122 3 0 0 42 62 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 1 45 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 53 - A - - MR 123 122 3 125 3 1 1 43 62 -8.303 -0.019 -6.620 1.694 -2.259 -1.902 -1.791 D 124 122 3 125 3 0 0 41 61 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 1 44 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 52 - G - - MR 126 125 3 128 3 1 1 42 61 -8.303 -0.019 -6.620 -1.461 -2.662 1.695 -2.048 D 127 125 3 128 3 0 0 41 60 -6.390 -1.568 -0.620 IR 128 128 3 128 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 34 ] - 51 - U - - MR 129 128 3 131 5 1 1 41 60 -7.045 -0.040 -6.860 -7.072 -7.964 -1.383 -1.398 -2.111 1.588 D 130 128 3 131 5 0 0 40 59 -5.352 -0.707 -2.978 -4.409 -2.404 IR 131 131 3 131 5 1 1 41 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 26 50 G C - - MP 132 131 3 136 6 2 2 40 59 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -4.636 -3.044 -4.726 0.270 -5.084 -4.652 -0.475 -4.961 -4.258 3.612 -4.603 -0.739 -0.863 -4.398 -2.506 -3.604 ML 133 131 3 136 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 3 136 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 3 136 6 0 0 36 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 39 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 27 49 u a - - MP 138 137 6 142 6 2 2 38 57 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -3.082 -3.143 -3.076 0.313 1.381 -3.732 1.843 -2.940 -3.112 0.448 -3.559 -1.375 2.260 -3.299 -0.098 -2.096 ML 139 137 6 142 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 37 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 28 48 A U - - MP 144 143 6 148 6 2 2 36 55 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -3.701 -2.756 -3.726 3.270 -4.020 -5.075 0.274 -3.774 -3.622 1.176 -4.165 -0.247 -0.144 -4.277 -1.668 -2.566 ML 145 143 6 148 6 1 1 35 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 35 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 33 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 29 47 u a - - MP 150 149 6 154 4 2 2 34 53 -6.888 -7.095 -0.055 -5.509 -3.375 -3.353 -3.314 0.253 -2.407 -3.931 1.863 -3.076 -3.339 0.484 -3.757 -1.438 2.290 -3.552 1.757 -2.262 ML 151 149 6 154 4 1 1 35 54 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 4 1 1 34 54 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 153 149 6 154 4 0 0 33 53 -4.568 -4.250 -2.265 -0.520 IL 154 154 5 154 4 1 1 36 55 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 155 155 6 155 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 30 - A - - - ML 156 155 6 158 5 1 1 32 51 -7.045 -0.040 -6.860 -7.072 -7.964 1.694 -2.259 -1.902 -1.791 D 157 155 6 158 5 0 0 31 50 -4.959 -0.803 -4.221 -2.596 -2.508 IL 158 158 3 158 5 1 1 32 51 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 31 46 U A - - MP 159 158 3 163 4 2 2 31 50 -6.888 -7.095 -0.055 -5.509 -4.076 -3.897 -3.927 -0.201 -2.893 -4.501 1.432 -3.581 -3.933 0.071 -4.311 -1.800 3.271 -4.231 -0.572 -2.768 ML 160 158 3 163 4 1 1 31 50 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 161 158 3 163 4 1 1 31 50 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 162 158 3 163 4 0 0 30 49 -4.568 -4.250 -2.265 -0.520 IL 163 163 5 163 4 1 1 33 52 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 164 164 6 164 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 32 - G - - - ML 165 164 6 167 3 1 1 28 47 -8.303 -0.019 -6.620 -1.461 -2.662 1.695 -2.048 D 166 164 6 167 3 0 0 27 45 -5.620 -0.734 -1.403 IL 167 167 3 167 3 1 1 29 48 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 45 - G - - MR 168 167 3 170 5 1 1 27 46 -7.045 -0.040 -6.860 -7.072 -7.964 -1.461 -2.662 1.695 -2.048 D 169 167 3 170 5 0 0 26 44 -5.352 -0.707 -2.978 -4.409 -2.404 IR 170 170 3 170 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 33 44 A U - - MP 171 170 3 175 6 2 2 26 45 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -3.701 -2.756 -3.726 3.270 -4.020 -5.075 0.274 -3.774 -3.622 1.176 -4.165 -0.247 -0.144 -4.277 -1.668 -2.566 ML 172 170 3 175 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 173 170 3 175 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 174 170 3 175 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 175 175 5 175 6 1 1 26 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 176 176 6 176 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 34 43 C G - - MP 177 176 6 181 6 2 2 24 43 -9.085 -9.024 -0.021 -7.801 -8.080 -8.475 -4.440 -4.335 -4.148 -0.578 -2.890 -4.574 3.516 -3.689 -4.194 -0.321 -4.466 -2.281 0.635 -4.516 -0.594 -3.037 ML 178 176 6 181 6 1 1 23 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 179 176 6 181 6 1 1 23 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 180 176 6 181 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 181 181 5 181 6 1 1 24 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 182 182 6 182 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 35 42 a u - - MP 183 182 6 187 6 2 2 22 41 -9.085 -9.024 -0.172 -3.293 -8.080 -8.475 -2.755 -2.317 -2.876 2.179 -2.901 -3.854 1.023 -3.065 -2.864 1.443 -3.400 -0.148 0.700 -3.121 -0.782 1.298 ML 184 182 6 187 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 185 182 6 187 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 186 182 6 187 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 187 187 5 187 6 1 1 22 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 188 188 6 188 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 36 41 g u - - MP 189 188 6 193 4 2 2 20 39 -6.448 -6.655 -0.076 -5.070 -3.111 -2.136 -3.228 1.383 -3.522 -4.304 0.765 -3.329 -3.055 2.027 -3.557 2.213 0.401 -3.587 -1.171 -2.058 ML 190 188 6 193 4 1 1 20 39 -4.722 -4.905 -0.238 -3.634 -0.619 -1.656 1.349 -1.046 MR 191 188 6 193 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 192 188 6 193 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 193 193 5 193 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 194 194 6 194 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 37 - A - - - ML 195 194 6 197 3 1 1 16 35 -7.908 -0.021 -6.562 1.694 -2.259 -1.902 -1.791 D 196 194 6 197 3 0 0 16 34 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 38 - U - - - ML 198 197 3 200 3 1 1 15 33 -7.908 -0.021 -6.562 -1.383 -1.398 -2.111 1.588 D 199 197 3 200 3 0 0 15 33 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 39 - U - - - ML 201 200 3 203 3 1 1 13 32 -7.908 -0.021 -6.562 -1.383 -1.398 -2.111 1.588 D 202 200 3 203 3 0 0 13 32 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 40 - U - - - ML 204 203 3 206 2 1 1 1 1 * 0.000 -1.383 -1.398 -2.111 1.588 D 205 203 3 206 2 0 0 0 0 * 0.000 IL 206 206 3 206 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 51 ] - - - - - - E 207 206 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME sca_ncR26 ACC RF02721 DESC Small Cajal body specific RNA ncR26 LENG 68 MAXL 157 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Mar 1 14:52:51 2017 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED NSEQ 2 EFFN 1.792969 CKSUM 1765097328 STATS LOCAL MSV -8.3452 0.72636 STATS LOCAL VITERBI -9.7543 0.72636 STATS LOCAL FORWARD -3.0913 0.72636 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.51977 1.65686 1.37814 1.08337 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.34885 2.35825 2.85379 0.28461 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.34885 2.35825 2.85379 0.28461 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.34885 2.35825 2.85379 0.28461 3 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.40357 3.23680 0.21049 2.81130 4 G - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.21141 2.95638 2.70868 2.63211 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.89919 2.32162 1.05746 1.91291 6 a - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 0.21141 2.95638 2.70868 2.63211 7 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.21141 2.95638 2.70868 2.63211 8 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.50473 0.28562 3.07268 2.11647 9 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 1.84647 1.07470 2.38236 0.89533 10 u - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 1.62298 2.01665 1.17240 1.02174 11 u - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.40337 2.94182 0.22187 2.88595 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 1.15906 1.91540 1.42610 1.20834 13 a - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.34885 2.35825 2.85379 0.28461 14 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.34885 2.35825 2.85379 0.28461 15 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.34885 2.35825 2.85379 0.28461 16 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.34885 2.35825 2.85379 0.28461 17 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 1.80020 2.60687 0.38764 2.49727 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 0.84178 1.87262 1.41999 1.75086 19 a - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.04614 1.49161 1.77956 0.74015 20 u - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 1.80108 2.60833 0.38701 2.49933 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.50473 0.28562 3.07268 2.11647 22 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 1.91206 2.09280 0.52423 1.98871 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.91540 0.32063 2.65274 1.89935 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.91539 0.32063 2.65273 1.89935 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.39969 2.93806 0.22292 2.88054 26 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.28312 0.92220 2.09767 0.97379 27 c - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 0.47841 2.44579 1.59990 2.38970 28 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.35036 1.38775 2.10315 0.62931 29 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 0.21141 2.95638 2.70868 2.63211 30 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 2.67312 1.68953 2.38748 0.42389 31 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.40357 3.23680 0.21049 2.81130 32 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.47860 2.44531 1.59987 2.38894 33 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.91486 0.32071 2.65250 1.89926 34 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 1.15907 1.91549 1.42608 1.20831 35 a - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 1.67139 2.15191 0.56824 2.04616 36 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 0.21141 2.95638 2.70868 2.63211 37 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.34885 2.35825 2.85379 0.28461 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.34885 2.35825 2.85379 0.28461 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.34885 2.35825 2.85379 0.28461 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.33404 3.73767 1.34643 1.46634 0.26236 1.09861 0.40547 41 2.25290 1.28797 1.92073 0.74956 41 u - - > 1.38629 1.38629 1.38629 1.38629 0.06439 3.46801 3.46801 1.46634 0.26236 0.16808 1.86617 42 2.04492 1.64198 1.72736 0.69463 42 u - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 2.17609 2.82211 0.27683 2.67585 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 2.62698 1.86270 2.26314 0.40283 44 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.40357 3.23680 0.21049 2.81130 45 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 0.48384 2.56087 1.52624 2.41916 46 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 1.10922 2.26689 0.80474 2.12575 47 g - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 2.62239 1.86239 2.26167 0.40363 48 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 0.74194 2.26332 1.22359 2.07439 49 a - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 3.11151 0.25848 2.77789 2.11139 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.34885 2.35825 2.85379 0.28461 51 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 2.40357 3.23680 0.21049 2.81130 52 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 0.21141 2.95638 2.70868 2.63211 53 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 2.40357 3.23680 0.21049 2.81130 54 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 2.17193 2.81711 0.27843 2.66938 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 2.17048 2.81536 0.27900 2.66711 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 1.49639 0.83053 1.90443 1.65373 57 c - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.71828 1.67320 2.41352 0.42027 58 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 59 1.16996 1.95098 1.31778 1.27383 59 a - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 60 1.98016 1.61951 1.17983 1.03107 60 u - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 61 2.72341 1.67323 2.41542 0.41949 61 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 62 2.34885 2.35825 2.85379 0.28461 62 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 63 2.34885 2.35825 2.85379 0.28461 63 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 64 2.04552 1.64197 1.72745 0.69444 64 u - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 65 3.11475 0.25809 2.77920 2.11201 65 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 66 2.34885 2.35825 2.85379 0.28461 66 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 67 2.34885 2.35825 2.85379 0.28461 67 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 68 2.34885 2.35825 2.85379 0.28461 68 U - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //