# STOCKHOLM 1.0
#=GF ID Avalong_thermometer
#=GF AC RF02698
#=GF DE Avalong 5' UTR thermometer
#=GF AU Argasinska J; 0000-0003-2678-2824
#=GF GA 154.0
#=GF NC 50.1
#=GF TC 154.8
#=GF SE Argasinska J
#=GF SS Predicted; PMID:24755616;
#=GF TP Cis-reg; thermoregulator;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR SO; 0002168; RNA_thermometer;
#=GF DR GO; 0009266; response to temperature stimulus;
#=GF DR GO; 0006417; regulation of translation;
#=GF RN [1]
#=GF RM 24755616
#=GF RT Translational control of small heat shock genes in mesophilic and
#=GF RT thermophilic cyanobacteria by RNA thermometers.
#=GF RA Cimdins A, Klinkert B, Aschke-Sonnenborn U, Kaiser FM, Kortmann J,
#=GF RA Narberhaus F
#=GF RL RNA Biol. 2014;11:594-608.
#=GF WK Cyanobacterial_RNA_thermometer
#=GF SQ 2

CP000117.1/6046551-6046681 GAAGGAGCUAGAGAUUAAGCUUUUCCACAAUGCAAAUUAAUUCAACAAUAUACCUCUUAUUUAAUUAGUAAAAAGCUUAAUAAUAGCCUUCUGAUAAGCAAAUGUUGCAUUUUAGAGGUGAUAUUAUGGCA
BA000019.2/2174165-2174295 GAAGGAGCUAGAAAUUAAGCUUUGCCAAACUCCAGAUUGAUUCGAUCAUAUACCUCUUCGUUUACCAGCAAAAAGCUUAAUAAUAGCCUUCUUAUAAGCAAAUAUUGCAUUUUAGAGGUGAUAUUAUGGCA
#=GC SS_cons               ::::::((((,,,<<<<<<<<<<<------<<<-<<<<<<____________________>>>>>>->>>>>>>>>>>>>>,,,,<<<<-<<<<---<<<<___>>>>--->>>>>>>>,,,,,,,)))):
#=GC RF                    GAAGGAGCuaGAaauuaaGCuuuuCCAaAaugCAgguuaaUUCaAuaAUAUACCUCUUauuuaaccAGcaaaaaGCuuaauAAUAgCCuUCugaUAAGCaaAUauuGCAUUucaGaGGuGAUAUUAugGCA
//
