INFERNAL1/a [1.1.5 | Sep 2023] NAME PreQ1-III ACC RF02680 DESC PreQ1-III (pre queuosine) riboswitch aptamer STATES 320 NODES 88 CLEN 102 W 119 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 10 08:55:35 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/14.9/updates/addPDBs/RF02680/RF02680/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 31 EFFN 1.093628 CKSUM 2752980574 NULL 0.000 0.000 0.000 0.000 GA 63.00 TC 64.90 NC 54.40 EFP7GF -6.2635 0.71844 ECMLC 0.70527 -7.83273 0.47090 1600000 419320 0.002862 ECMGC 0.43082 -15.27119 -5.24600 1600000 30047 0.013312 ECMLI 0.56056 -8.12985 1.74266 1600000 303833 0.003950 ECMGI 0.45779 -9.62504 -0.24174 1600000 29349 0.013629 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 119 139 -6.509 -7.755 -0.104 -4.208 IL 1 1 2 1 4 9 45 120 141 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 10 45 121 141 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 105 - G - - MR 3 2 3 5 3 11 45 119 139 -8.022 -0.024 -6.340 -0.825 -1.908 1.465 -1.293 D 4 2 3 5 3 6 41 117 138 -6.390 -1.568 -0.620 IR 5 5 3 5 3 10 45 120 140 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 104 - A - - MR 6 5 3 8 3 10 44 118 138 -8.022 -0.024 -6.340 1.510 -1.668 -1.370 -1.150 D 7 5 3 8 3 6 40 116 137 -6.390 -1.568 -0.620 IR 8 8 3 8 3 9 44 119 139 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 103 - G - - MR 9 8 3 11 3 10 43 117 137 -8.022 -0.024 -6.340 -0.825 -1.908 1.465 -1.293 D 10 8 3 11 3 5 39 115 136 -6.390 -1.568 -0.620 IR 11 11 3 11 3 9 43 118 138 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 102 - G - - MR 12 11 3 14 3 9 42 116 136 -8.022 -0.024 -6.340 -0.825 -1.908 1.465 -1.293 D 13 11 3 14 3 5 38 114 135 -6.390 -1.568 -0.620 IR 14 14 3 14 3 8 42 117 137 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 101 - u - - MR 15 14 3 17 3 9 41 115 135 -8.022 -0.024 -6.340 -0.447 0.494 -1.197 0.507 D 16 14 3 17 3 4 37 113 134 -6.390 -1.568 -0.620 IR 17 17 3 17 3 8 41 116 136 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 100 - C - - MR 18 17 3 20 3 8 40 114 134 -8.022 -0.024 -6.340 -0.923 1.300 -1.703 -0.509 D 19 17 3 20 3 4 36 112 133 -6.390 -1.568 -0.620 IR 20 20 3 20 3 7 40 115 135 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 99 - G - - MR 21 20 3 23 3 8 39 113 133 -8.022 -0.024 -6.340 -0.825 -1.908 1.465 -1.293 D 22 20 3 23 3 3 35 111 132 -6.390 -1.568 -0.620 IR 23 23 3 23 3 7 39 114 134 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 98 - C - - MR 24 23 3 26 3 7 39 112 132 -8.022 -0.024 -6.340 -0.923 1.300 -1.703 -0.509 D 25 23 3 26 3 3 35 110 131 -6.390 -1.568 -0.620 IR 26 26 3 26 3 6 38 113 133 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 97 - C - - MR 27 26 3 29 3 7 38 111 131 -8.022 -0.024 -6.340 -0.923 1.300 -1.703 -0.509 D 28 26 3 29 3 3 34 109 130 -6.390 -1.568 -0.620 IR 29 29 3 29 3 6 37 112 132 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 96 - u - - MR 30 29 3 32 3 6 37 110 130 -8.022 -0.024 -6.340 0.100 -0.418 -0.926 0.725 D 31 29 3 32 3 2 33 108 129 -6.390 -1.568 -0.620 IR 32 32 3 32 3 5 37 111 131 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 95 - A - - MR 33 32 3 35 3 6 36 109 129 -8.022 -0.024 -6.340 1.159 -1.078 -1.015 -0.326 D 34 32 3 35 3 2 32 107 128 -6.390 -1.568 -0.620 IR 35 35 3 35 3 5 36 110 130 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 94 - u - - MR 36 35 3 38 3 6 35 108 128 -8.022 -0.024 -6.340 0.287 -0.202 -0.857 0.442 D 37 35 3 38 3 2 31 106 127 -6.390 -1.568 -0.620 IR 38 38 3 38 3 5 35 109 129 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 93 - c - - MR 39 38 3 41 3 5 34 107 127 -8.022 -0.024 -6.340 -0.519 0.767 -1.282 0.250 D 40 38 3 41 3 2 31 105 126 -6.390 -1.568 -0.620 IR 41 41 3 41 3 4 34 108 128 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 92 - U - - MR 42 41 3 44 3 5 33 106 126 -8.022 -0.024 -6.340 -0.858 -0.973 -1.549 1.377 D 43 41 3 44 3 1 30 104 125 -6.390 -1.568 -0.620 IR 44 44 3 44 3 4 33 107 127 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 91 - A - - MR 45 44 3 47 3 5 32 105 125 -8.022 -0.024 -6.340 1.510 -1.668 -1.370 -1.150 D 46 44 3 47 3 1 29 103 124 -6.390 -1.568 -0.620 IR 47 47 3 47 3 4 32 106 126 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 90 - A - - MR 48 47 3 50 3 4 31 104 124 -8.022 -0.024 -6.340 1.510 -1.668 -1.370 -1.150 D 49 47 3 50 3 1 29 102 123 -6.390 -1.568 -0.620 IR 50 50 3 50 3 3 31 105 125 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 89 - A - - MR 51 50 3 53 3 3 30 103 123 -8.022 -0.024 -6.340 1.510 -1.668 -1.370 -1.150 D 52 50 3 53 3 1 28 101 122 -6.390 -1.568 -0.620 IR 53 53 3 53 3 3 30 104 124 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 88 - A - - MR 54 53 3 56 3 3 29 102 122 -8.022 -0.024 -6.340 1.319 -1.304 -0.949 -0.780 D 55 53 3 56 3 1 28 101 121 -6.390 -1.568 -0.620 IR 56 56 3 56 3 2 29 103 123 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 87 - C - - MR 57 56 3 59 2 2 28 101 121 -7.914 -0.006 -0.923 1.300 -1.703 -0.509 D 58 56 3 59 2 1 27 100 121 -4.432 -0.068 IR 59 59 3 59 2 2 29 102 122 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 20 ] - - - - - - B 60 59 3 166 61 1 27 100 120 [ BEGR 63 ] - - - - - - S 61 60 1 62 3 0 0 49 68 -7.605 -0.026 -6.259 IL 62 62 2 62 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 51 - C - - - ML 63 62 2 65 3 1 1 49 68 -7.605 -0.180 -3.155 -0.923 1.300 -1.703 -0.509 D 64 62 2 65 3 0 0 48 67 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 52 - c - - - ML 66 65 3 68 3 1 1 48 67 -7.454 -0.029 -6.109 0.222 0.394 -0.880 -0.035 D 67 65 3 68 3 0 0 47 66 -6.952 -0.742 -1.344 IL 68 68 3 68 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 53 - A - - - ML 69 68 3 71 3 1 1 47 66 -7.605 -0.026 -6.259 1.419 -1.509 -1.089 -0.987 D 70 68 3 71 3 0 0 45 65 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 54 - A - - - ML 72 71 3 74 5 1 1 46 65 -6.785 -0.048 -6.601 -6.813 -7.705 1.510 -1.668 -1.370 -1.150 D 73 71 3 74 5 0 0 44 63 -4.959 -0.803 -4.221 -2.596 -2.508 IL 74 74 3 74 5 1 1 46 65 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 68 ] 55 86 a u - - MP 75 74 3 79 6 2 2 45 64 -8.971 -8.910 -0.023 -7.686 -7.966 -8.361 -2.879 -2.495 -2.952 2.680 -2.864 -3.869 1.174 -1.645 -2.997 1.407 -3.512 -0.381 0.808 -3.173 -0.693 -1.985 ML 76 74 3 79 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 3 79 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 3 79 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 69 ] 56 85 C G - - MP 81 80 6 85 6 2 2 43 62 -8.971 -8.910 -0.023 -7.686 -7.966 -8.361 -3.870 -3.700 -3.667 -0.008 -2.557 -4.164 3.265 -3.294 -3.701 0.365 -4.026 -1.640 1.014 -3.978 -0.255 -2.567 ML 82 80 6 85 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 70 ] 57 84 C G - - MP 87 86 6 91 4 2 2 41 60 -6.509 -7.755 -0.104 -4.208 -3.870 -3.700 -3.667 -0.008 -2.557 -4.164 3.265 -3.294 -3.701 0.365 -4.026 -1.640 1.014 -3.978 -0.255 -2.567 ML 88 86 6 91 4 1 1 40 59 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 4 1 1 40 59 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 90 86 6 91 4 0 0 38 57 -12.737 -14.007 -2.036 -0.404 IL 91 91 5 91 4 1 1 40 59 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 92 92 6 92 3 1 1 40 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 71 ] - 83 - c - - MR 93 92 6 95 5 1 1 39 58 -6.785 -0.048 -6.601 -6.813 -7.705 -0.599 0.931 -1.369 0.064 D 94 92 6 95 5 0 0 37 56 -5.352 -0.707 -2.978 -4.409 -2.404 IR 95 95 3 95 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 72 ] 58 82 C G - - MP 96 95 3 100 6 2 2 38 57 -6.794 -4.565 -0.094 -7.686 -7.966 -8.361 -2.963 -2.965 -2.172 0.333 -2.746 -3.854 3.186 -3.238 -3.138 0.625 -2.840 -1.231 0.745 -3.233 -0.705 -2.197 ML 97 95 3 100 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 3 100 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 3 100 6 0 0 33 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 37 56 -2.667 -2.395 -0.848 -4.585 -5.361 -5.022 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 37 56 -2.737 -0.380 -6.248 -4.416 -5.522 0.000 0.000 0.000 0.000 [ MATP 73 ] 60 80 g c - - MP 102 101 6 106 6 2 2 35 54 -8.971 -8.910 -0.023 -7.686 -7.966 -8.361 -2.569 -1.526 -2.670 1.676 -2.516 -3.471 1.784 -2.861 -2.732 1.827 -3.232 -0.257 1.263 -2.780 -0.333 -1.716 ML 103 101 6 106 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 31 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 74 ] 61 79 c g - - MP 108 107 6 112 6 2 2 33 52 -8.971 -8.910 -0.023 -7.686 -7.966 -8.361 -2.983 -2.760 -3.005 0.827 -2.390 -3.718 2.299 -2.937 -3.039 1.672 -3.500 -0.736 1.396 -3.159 0.592 -1.956 ML 109 107 6 112 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 0 29 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 75 ] 62 78 c g - - MP 114 113 6 118 6 2 2 31 50 -8.971 -8.910 -0.023 -7.686 -7.966 -8.361 -2.849 -2.499 -2.904 1.635 -2.549 -3.672 1.948 -2.977 -2.960 1.802 -3.438 -0.425 1.280 -3.024 -0.097 -1.884 ML 115 113 6 118 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 0 27 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 76 ] 63 77 g c - - MP 120 119 6 124 6 2 2 29 48 -8.971 -8.910 -0.023 -7.686 -7.966 -8.361 -3.267 -2.416 -3.300 1.541 -3.398 -4.039 1.056 -3.518 -3.320 2.798 -3.767 -0.126 0.606 -3.376 -1.007 -2.234 ML 121 119 6 124 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 77 ] 64 76 g c - - MP 126 125 6 130 6 2 2 27 46 -8.971 -8.910 -0.023 -7.686 -7.966 -8.361 -3.384 -2.423 -3.434 1.648 -3.662 -4.196 0.715 -3.653 -3.384 2.913 -3.842 -0.082 0.373 -3.539 -1.254 -2.341 ML 127 125 6 130 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 78 ] 65 75 G C - - MP 132 131 6 136 6 2 2 25 44 -8.971 -8.910 -0.102 -5.275 -4.816 -8.361 -3.644 -2.540 -3.700 1.169 -4.001 -4.286 0.436 -3.945 -3.582 3.194 -4.014 -0.093 0.107 -3.711 -1.547 -2.602 ML 133 131 6 136 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 79 ] 66 74 g c - - MP 138 137 6 142 4 2 2 23 42 -6.298 -6.505 -0.084 -4.920 -2.409 -1.977 -2.559 1.343 -2.491 -3.359 1.476 -1.088 -2.537 1.775 -3.021 1.088 1.147 -2.705 -0.357 -1.591 ML 139 137 6 142 4 1 1 24 43 -4.008 -4.190 -0.413 -2.920 0.142 -0.734 0.516 -0.209 MR 140 137 6 142 4 1 1 23 42 -5.276 -4.305 -1.006 -1.233 -0.102 -0.452 -0.713 0.788 D 141 137 6 142 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 142 142 5 142 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 143 143 6 143 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 80 ] 67 - C - - - ML 144 143 6 146 3 1 1 20 39 -7.605 -0.026 -6.259 -0.923 1.300 -1.703 -0.509 D 145 143 6 146 3 0 0 19 38 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 81 ] 68 - U - - - ML 147 146 3 149 3 1 1 19 38 -7.605 -0.026 -6.259 -0.858 -0.973 -1.549 1.377 D 148 146 3 149 3 0 0 18 37 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 82 ] 69 - G - - - ML 150 149 3 152 3 1 1 18 36 -7.605 -0.026 -6.259 -0.825 -1.908 1.465 -1.293 D 151 149 3 152 3 0 0 17 36 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 83 ] 70 - G - - - ML 153 152 3 155 3 1 1 16 35 -7.605 -0.026 -6.259 -0.825 -1.908 1.465 -1.293 D 154 152 3 155 3 0 0 16 35 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 84 ] 71 - C - - - ML 156 155 3 158 3 1 1 15 34 -7.605 -0.026 -6.259 -0.923 1.300 -1.703 -0.509 D 157 155 3 158 3 0 0 15 33 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 85 ] 72 - G - - - ML 159 158 3 161 3 1 1 13 32 -7.605 -0.026 -6.259 -0.825 -1.908 1.465 -1.293 D 160 158 3 161 3 0 0 13 32 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 86 ] 73 - G - - - ML 162 161 3 164 2 1 1 1 1 * 0.000 -0.825 -1.908 1.465 -1.293 D 163 161 3 164 2 0 0 0 0 * 0.000 IL 164 164 3 164 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 87 ] - - - - - - E 165 164 3 -1 0 0 0 0 0 [ BEGL 21 ] - - - - - - S 166 60 1 167 1 0 6 65 85 0.000 [ BIF 22 ] - - - - - - B 167 166 1 168 239 0 6 65 85 [ BEGL 23 ] - - - - - - S 168 167 1 169 4 0 0 38 57 -0.069 -6.649 -5.194 -6.697 [ MATP 24 ] 1 23 G C - - MP 169 168 1 173 6 2 2 38 57 -8.957 -8.897 -0.023 -7.673 -7.953 -8.348 -3.982 -2.739 -4.041 0.680 -4.164 -4.370 0.296 -4.206 -3.787 3.384 -4.185 -0.424 -0.117 -3.959 -1.707 -2.930 ML 170 168 1 173 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 171 168 1 173 6 1 1 36 56 -7.118 -5.847 -1.756 -5.825 -0.735 -4.039 0.189 0.043 -0.478 0.153 D 172 168 1 173 6 0 0 34 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 173 173 5 173 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 174 174 6 174 5 1 1 37 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 2 22 a u - - MP 175 174 6 179 6 2 2 36 55 -8.957 -8.897 -0.023 -7.673 -7.953 -8.348 -3.246 -2.431 -3.293 2.785 -3.359 -4.393 0.915 -3.358 -3.216 1.687 -3.733 -0.013 0.488 -3.671 -1.033 -2.167 ML 176 174 6 179 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 177 174 6 179 6 1 1 35 54 -7.118 -5.847 -1.603 -5.825 -0.817 -4.039 0.181 -0.365 -0.401 0.414 D 178 174 6 179 6 0 0 32 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 179 179 5 179 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 180 180 6 180 5 1 1 35 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 3 21 G C - - MP 181 180 6 185 6 2 2 34 53 -8.962 -8.902 -0.023 -7.678 -7.958 -8.353 -4.009 -2.752 -4.068 0.664 -4.201 -4.383 0.264 -4.236 -3.808 3.396 -4.203 -0.436 -0.147 -3.977 -1.740 -2.956 ML 182 180 6 185 6 1 1 33 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 183 180 6 185 6 1 1 33 53 -7.069 -5.798 -1.707 -5.777 -0.768 -3.990 0.248 -0.076 -0.401 0.146 D 184 180 6 185 6 0 0 31 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 185 185 5 185 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 186 186 6 186 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 4 20 C G - - MP 187 186 6 191 4 2 2 32 51 -6.532 -6.739 -0.071 -5.153 -3.477 -3.340 -2.389 0.231 -2.714 -4.116 3.197 -3.337 -3.499 0.616 -3.917 -1.362 0.933 -3.666 -0.473 -2.430 ML 188 186 6 191 4 1 1 32 52 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 189 186 6 191 4 1 1 32 51 -4.903 -3.932 -1.800 -0.704 0.343 -0.550 0.147 -0.087 D 190 186 6 191 4 0 0 31 50 -4.568 -4.250 -2.265 -0.520 IL 191 191 5 191 4 1 1 34 53 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 192 192 6 192 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 5 - A - - - ML 193 192 6 195 3 1 1 29 49 -7.582 -0.027 -6.236 1.492 -1.625 -1.331 -1.104 D 194 192 6 195 3 0 0 28 47 -6.329 -1.842 -0.497 IL 195 195 3 195 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 6 - A - - - ML 196 195 3 198 3 1 1 28 47 -7.582 -0.027 -6.236 1.492 -1.625 -1.331 -1.104 D 197 195 3 198 3 0 0 27 46 -6.329 -1.842 -0.497 IL 198 198 3 198 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 7 - C - - - ML 199 198 3 201 3 1 1 27 46 -7.582 -0.027 -6.236 -0.876 1.273 -1.653 -0.472 D 200 198 3 201 3 0 0 26 45 -6.329 -1.842 -0.497 IL 201 201 3 201 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 8 - U - - - ML 202 201 3 204 3 1 1 26 45 -7.582 -0.027 -6.236 -0.821 -0.944 -1.508 1.358 D 203 201 3 204 3 0 0 25 44 -6.329 -1.842 -0.497 IL 204 204 3 204 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 9 - U - - - ML 205 204 3 207 3 1 1 25 44 -7.582 -0.027 -6.236 -0.821 -0.944 -1.508 1.358 D 206 204 3 207 3 0 0 24 43 -6.329 -1.842 -0.497 IL 207 207 3 207 3 1 1 27 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 10 - A - - - ML 208 207 3 210 3 1 1 24 43 -7.582 -0.027 -6.236 1.492 -1.625 -1.331 -1.104 D 209 207 3 210 3 0 0 23 42 -6.329 -1.842 -0.497 IL 210 210 3 210 3 1 1 26 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 11 - G - - - ML 211 210 3 213 3 1 1 23 42 -7.582 -0.027 -6.236 -0.779 -1.852 1.442 -1.238 D 212 210 3 213 3 0 0 21 40 -6.329 -1.842 -0.497 IL 213 213 3 213 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 12 - G - - - ML 214 213 3 216 3 1 1 21 40 -7.582 -0.027 -6.236 -0.779 -1.852 1.442 -1.238 D 215 213 3 216 3 0 0 20 39 -6.329 -1.842 -0.497 IL 216 216 3 216 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 13 - A - - - ML 217 216 3 219 3 1 1 20 39 -7.582 -0.027 -6.236 1.492 -1.625 -1.331 -1.104 D 218 216 3 219 3 0 0 19 38 -6.329 -1.842 -0.497 IL 219 219 3 219 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 14 - U - - - ML 220 219 3 222 3 1 1 19 38 -7.582 -0.027 -6.236 -0.821 -0.944 -1.508 1.358 D 221 219 3 222 3 0 0 18 37 -6.329 -1.842 -0.497 IL 222 222 3 222 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 15 - U - - - ML 223 222 3 225 3 1 1 18 36 -7.582 -0.027 -6.236 -0.821 -0.944 -1.508 1.358 D 224 222 3 225 3 0 0 17 36 -6.329 -1.842 -0.497 IL 225 225 3 225 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 16 - U - - - ML 226 225 3 228 3 1 1 16 35 -7.582 -0.027 -6.236 -0.821 -0.944 -1.508 1.358 D 227 225 3 228 3 0 0 16 34 -6.329 -1.842 -0.497 IL 228 228 3 228 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 17 - U - - - ML 229 228 3 231 3 1 1 15 34 -7.582 -0.027 -6.236 -0.821 -0.944 -1.508 1.358 D 230 228 3 231 3 0 0 15 33 -6.329 -1.842 -0.497 IL 231 231 3 231 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 18 - A - - - ML 232 231 3 234 3 1 1 13 32 -7.582 -0.027 -6.236 1.492 -1.625 -1.331 -1.104 D 233 231 3 234 3 0 0 13 32 -6.329 -1.393 -0.721 IL 234 234 3 234 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 19 - G - - - ML 235 234 3 237 2 1 1 1 1 * 0.000 -0.825 -1.908 1.465 -1.293 D 236 234 3 237 2 0 0 0 0 * 0.000 IL 237 237 3 237 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 43 ] - - - - - - E 238 237 3 -1 0 0 0 0 0 [ BEGR 44 ] - - - - - - S 239 167 1 240 5 0 0 40 60 -6.785 -0.048 -6.601 -6.813 -7.705 IL 240 240 2 240 5 1 1 42 61 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 24 50 C G - - MP 241 240 2 245 6 2 2 40 60 -8.971 -8.910 -0.023 -7.686 -7.966 -8.361 -3.870 -3.700 -3.667 -0.008 -2.557 -4.164 3.265 -3.294 -3.701 0.365 -4.026 -1.640 1.014 -3.978 -0.255 -2.567 ML 242 240 2 245 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 243 240 2 245 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 244 240 2 245 6 0 0 36 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 245 245 5 245 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 246 246 6 246 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 25 49 c g - - MP 247 246 6 251 6 2 2 38 58 -8.971 -8.910 -0.023 -7.686 -7.966 -8.361 -3.115 -2.702 -3.129 0.985 -2.608 -3.857 2.303 -3.089 -3.153 1.976 -3.609 -0.554 1.246 -3.277 -0.277 -2.051 ML 248 246 6 251 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 249 246 6 251 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 250 246 6 251 6 0 0 34 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 251 251 5 251 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 252 252 6 252 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 26 48 C G - - MP 253 252 6 257 6 2 2 36 55 -8.971 -8.910 -0.023 -7.686 -7.966 -8.361 -3.870 -3.700 -3.667 -0.008 -2.557 -4.164 3.265 -3.294 -3.701 0.365 -4.026 -1.640 1.014 -3.978 -0.255 -2.567 ML 254 252 6 257 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 255 252 6 257 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 256 252 6 257 6 0 0 32 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 257 257 5 257 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 258 258 6 258 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 27 47 g c - - MP 259 258 6 263 6 2 2 34 53 -7.523 -8.910 -0.028 -7.686 -7.966 -8.361 -2.919 -2.385 -2.969 1.156 -2.815 -3.727 1.670 -3.139 -3.050 2.319 -3.514 0.199 1.246 -3.041 -0.494 -1.945 ML 260 258 6 263 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 261 258 6 263 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 262 258 6 263 6 0 0 30 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 263 263 5 263 6 1 1 34 53 -2.623 -2.886 -0.731 -4.541 -5.317 -4.978 0.000 0.000 0.000 0.000 IR 264 264 6 264 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 29 46 G C - - MP 265 264 6 269 6 2 2 32 51 -8.971 -8.910 -0.023 -7.686 -7.966 -8.361 -3.559 -2.598 -3.565 0.917 -3.545 -4.131 0.869 -3.737 -3.536 3.083 -3.945 -0.315 0.665 -3.578 -1.126 -2.489 ML 266 264 6 269 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 267 264 6 269 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 268 264 6 269 6 0 0 28 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 269 269 5 269 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 270 270 6 270 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 30 45 c g - - MP 271 270 6 275 6 2 2 30 49 -8.971 -8.910 -0.023 -7.686 -7.966 -8.361 -3.124 -2.980 -3.103 0.634 -2.316 -3.765 2.563 -2.933 -3.126 1.208 -3.563 -0.986 1.408 -3.298 0.816 -2.039 ML 272 270 6 275 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 273 270 6 275 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 274 270 6 275 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 275 275 5 275 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 276 276 6 276 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 31 44 g c - - MP 277 276 6 281 6 2 2 28 47 -8.971 -8.910 -0.023 -7.686 -7.966 -8.361 -2.752 -1.583 -2.856 1.258 -2.939 -3.596 1.380 -3.108 -2.888 2.274 -3.334 1.089 0.875 -2.929 -0.695 -1.863 ML 278 276 6 281 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 279 276 6 281 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 280 276 6 281 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 281 281 5 281 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 282 282 6 282 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 32 43 c g - - MP 283 282 6 287 6 2 2 26 45 -8.971 -8.910 -0.052 -7.686 -7.966 -5.486 -2.709 -2.502 -2.788 1.010 -2.389 -3.570 1.936 -2.852 -2.833 1.724 -3.332 -0.521 1.824 -2.916 -0.148 -1.131 ML 284 282 6 287 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 285 282 6 287 6 1 1 25 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 286 282 6 287 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 287 287 5 287 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 288 288 6 288 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 53 ] 33 42 g c - - MP 289 288 6 293 4 2 2 24 43 -6.467 -6.674 -0.075 -5.088 -3.077 -2.387 -3.121 1.150 -3.062 -3.855 1.505 -3.307 -3.168 2.600 -3.620 0.198 0.899 -3.188 -0.710 -2.076 ML 290 288 6 293 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 291 288 6 293 4 1 1 24 44 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 292 288 6 293 4 0 0 23 42 -4.921 -4.603 -2.618 -0.390 IL 293 293 5 293 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 294 294 6 294 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 34 - u - - - ML 295 294 6 297 3 1 1 21 40 -7.524 -0.028 -6.178 -0.056 -0.239 -0.932 0.737 D 296 294 6 297 3 0 0 20 39 -6.654 -2.167 -0.382 IL 297 297 3 297 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 35 - c - - - ML 298 297 3 300 3 1 1 20 39 -7.524 -0.052 -5.064 -0.472 0.777 -1.227 0.187 D 299 297 3 300 3 0 0 19 38 -6.654 -2.167 -0.382 IL 300 300 3 300 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 36 - u - - - ML 301 300 3 303 3 1 1 19 38 -7.501 -0.028 -6.155 -0.230 -0.501 -0.598 0.832 D 302 300 3 303 3 0 0 18 37 -6.763 -1.727 -0.538 IL 303 303 3 303 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 37 - C - - - ML 304 303 3 306 3 1 1 18 36 -7.531 -0.028 -6.185 -0.655 1.078 -1.422 -0.184 D 305 303 3 306 3 0 0 17 35 -6.618 -2.131 -0.393 IL 306 306 3 306 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 38 - g - - - ML 307 306 3 309 3 1 1 16 35 -7.531 -0.028 -6.185 -0.256 -1.006 0.805 -0.123 D 308 306 3 309 3 0 0 16 34 -6.618 -1.277 -0.793 IL 309 309 3 309 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 39 - a - - - ML 310 309 3 312 3 1 1 15 34 -7.583 -0.188 -3.096 0.737 -0.689 -0.474 -0.009 D 311 309 3 312 3 0 0 15 33 -6.324 -1.837 -0.499 IL 312 312 3 312 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 40 - a - - - ML 313 312 3 315 3 1 1 13 32 -7.425 -0.030 -6.079 0.918 -1.001 -0.205 -0.427 D 314 312 3 315 3 0 0 13 31 -7.058 -1.500 -0.646 IL 315 315 3 315 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 41 - c - - - ML 316 315 3 318 2 1 1 1 1 * 0.000 -0.210 0.556 -0.502 -0.061 D 317 315 3 318 2 0 0 0 0 * 0.000 IL 318 318 3 318 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 62 ] - - - - - - E 319 318 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME PreQ1-III ACC RF02680 DESC PreQ1-III (pre queuosine) riboswitch aptamer LENG 102 MAXL 199 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 10 08:55:35 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/14.9/updates/addPDBs/RF02680/RF02680/CM NSEQ 31 EFFN 1.729370 CKSUM 2752980574 STATS LOCAL MSV -9.0134 0.71844 STATS LOCAL VITERBI -10.3947 0.71844 STATS LOCAL FORWARD -3.0371 0.71844 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.47659 1.32380 1.25187 1.51644 1.38629 1.38629 1.38629 1.38629 0.08311 3.80431 2.85644 1.46634 0.26236 0.00000 * 1 2.34664 2.83826 0.24299 2.78871 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.04727 3.76848 3.76848 1.46634 0.26236 1.52175 0.24632 2 0.53712 2.33985 1.52396 2.28890 2 A - - < 1.38629 1.38629 1.38629 1.38629 0.04727 3.76848 3.76848 1.46634 0.26236 1.04871 0.43138 3 2.35900 2.86286 0.23798 2.81078 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.04661 3.78235 3.78235 1.46634 0.26236 1.38011 0.28975 4 2.61782 0.34967 2.44539 1.99934 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.04661 3.78235 3.78235 1.46634 0.26236 1.38011 0.28975 5 0.23033 2.87981 2.63982 2.54839 5 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04661 3.78235 3.78235 1.46634 0.26236 1.38011 0.28975 6 0.23033 2.87981 2.63982 2.54839 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04661 3.78235 3.78235 1.46634 0.26236 1.38011 0.28975 7 2.41358 0.31456 2.97769 2.04419 7 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04661 3.78235 3.78235 1.46634 0.26236 1.38011 0.28975 8 2.27961 2.30148 2.78053 0.30712 8 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04661 3.78235 3.78235 1.46634 0.26236 1.38011 0.28975 9 2.27961 2.30148 2.78053 0.30712 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04661 3.78235 3.78235 1.46634 0.26236 1.38011 0.28975 10 0.23033 2.87981 2.63982 2.54839 10 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04661 3.78235 3.78235 1.46634 0.26236 1.38011 0.28975 11 2.32167 3.14118 0.23261 2.71520 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04661 3.78235 3.78235 1.46634 0.26236 1.38011 0.28975 12 2.32167 3.14118 0.23261 2.71520 12 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04661 3.78235 3.78235 1.46634 0.26236 1.38011 0.28975 13 0.23033 2.87981 2.63982 2.54839 13 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04661 3.78235 3.78235 1.46634 0.26236 1.38011 0.28975 14 2.27961 2.30148 2.78053 0.30712 14 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04661 3.78235 3.78235 1.46634 0.26236 1.38011 0.28975 15 2.27961 2.30148 2.78053 0.30712 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04661 3.78235 3.78235 1.46634 0.26236 1.38011 0.28975 16 2.27961 2.30148 2.78053 0.30712 16 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04661 3.78235 3.78235 1.46634 0.26236 1.38011 0.28975 17 2.27961 2.30148 2.78053 0.30712 17 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04661 3.78235 3.78235 1.46634 0.26236 1.38011 0.28975 18 0.23033 2.87981 2.63982 2.54839 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04661 3.78235 3.78235 1.46634 0.26236 0.69937 0.68697 19 2.36600 3.19301 0.22032 2.76728 19 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 20 2.23557 2.60704 0.30464 2.50189 20 G - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 21 2.99807 0.28283 2.68539 2.05360 21 C - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 22 2.49543 1.77370 2.15154 0.45961 22 U - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 23 2.92208 0.29743 2.64169 2.02336 23 C - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 24 2.89065 0.33080 2.61764 1.87643 24 C - - < 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 25 1.94858 1.04983 1.21827 1.55219 25 c - - < 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 26 2.88728 0.33132 2.61623 1.87591 26 C - - < 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 27 1.81527 1.53476 0.88648 1.56258 27 g - - < 1.38629 1.38629 1.38629 1.38629 0.05977 3.33127 3.80431 0.97831 0.47152 1.09861 0.40547 28 2.05945 2.27716 0.43960 2.07459 29 G - - < 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 29 2.20402 0.87774 1.75496 1.20063 30 c - - < 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 30 1.68960 1.72875 0.74874 1.80218 31 g - - < 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 31 1.89491 1.33002 1.37549 1.10117 32 u - - < 1.38629 1.38629 1.38629 1.38629 0.12777 3.80431 2.32618 1.46634 0.26236 1.09861 0.40547 32 1.82348 1.66330 0.72033 1.81749 33 g - - < 1.38629 1.38629 1.38629 1.38629 0.04938 3.72592 3.72592 1.46634 0.26236 1.85391 0.17034 33 1.48206 1.55734 2.13912 0.81108 34 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04938 3.72592 3.72592 1.46634 0.26236 1.85391 0.17034 34 1.89796 0.70402 2.44526 1.31368 35 c - - _ 1.38629 1.38629 1.38629 1.38629 0.07350 3.72592 3.06249 1.46634 0.26236 1.85391 0.17034 35 1.65683 1.80570 1.86228 0.71421 36 u - - _ 1.38629 1.38629 1.38629 1.38629 0.05056 3.70298 3.70298 1.46634 0.26236 1.18805 0.36358 36 2.13372 0.45950 2.69061 1.70284 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04903 3.73293 3.73293 1.46634 0.26236 1.80715 0.17927 37 1.70585 2.24013 0.69427 1.54882 38 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04903 3.73293 3.73293 1.46634 0.26236 0.65924 0.72825 38 0.82549 1.91775 1.74312 1.42684 39 a - - _ 1.38629 1.38629 1.38629 1.38629 0.20988 3.78312 1.79237 1.46634 0.26236 1.37155 0.29265 39 0.67430 2.20325 1.53044 1.81031 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05461 3.62785 3.62785 1.46634 0.26236 0.95826 0.48380 40 1.66483 0.85292 1.77678 1.53513 41 c - - _ 1.38629 1.38629 1.38629 1.38629 0.05056 3.70298 3.70298 1.46634 0.26236 1.32802 0.30789 41 2.05286 0.86280 1.51878 1.46674 42 c - - > 1.38629 1.38629 1.38629 1.38629 0.04938 3.72592 3.72592 1.46634 0.26236 0.37578 1.16076 42 1.31414 1.50824 1.17493 1.60368 43 g - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 43 2.03410 1.09267 1.57175 1.12025 44 c - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 44 1.69857 1.89456 0.63869 1.97554 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 45 2.27534 0.49851 2.10281 1.78563 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 46 1.77454 1.05933 1.38556 1.45429 47 c - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 47 2.15213 2.78387 0.28659 2.64307 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 48 1.79154 1.33168 0.94251 1.71694 49 g - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 49 2.15497 2.78721 0.28546 2.64746 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 50 2.46274 0.29854 3.02900 2.08315 51 C - - - 1.38629 1.38629 1.38629 1.38629 0.20007 3.80431 1.83850 1.46634 0.26236 1.09861 0.40547 51 1.25193 0.99790 2.11452 1.49296 52 c - - - 1.38629 1.38629 1.38629 1.38629 0.05299 3.65722 3.65722 1.46634 0.26236 0.24693 1.51959 52 0.28825 2.72788 2.36496 2.39559 53 A - - - 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 53 0.21988 2.92119 2.67703 2.59361 54 A - - - 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 54 0.56283 2.01813 1.76045 2.07517 55 A - - < 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 55 2.88008 0.33242 2.61322 1.87479 56 C - - < 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 56 2.88051 0.33236 2.61340 1.87486 57 C - - < 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 57 2.45918 0.36695 2.32302 2.09012 58 C - - < 1.38629 1.38629 1.38629 1.38629 0.07474 3.00090 3.80431 0.73766 0.65054 1.09861 0.40547 58 1.34673 1.40139 1.32107 1.48365 60 g - - < 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 59 2.05182 1.06534 1.41595 1.25810 61 c - - < 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 60 1.43683 1.31838 1.32930 1.46929 62 c - - < 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 61 1.53243 2.04939 0.64100 2.05253 63 G - - < 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 62 1.45981 2.36688 0.56212 2.26385 64 G - - < 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 63 1.86430 2.60448 0.37313 2.49521 65 G - - < 1.38629 1.38629 1.38629 1.38629 0.18373 3.80431 1.92712 1.46634 0.26236 1.09861 0.40547 64 1.65249 1.55183 0.92450 1.61024 66 g - - < 1.38629 1.38629 1.38629 1.38629 0.05215 3.67273 3.67273 1.46634 0.26236 0.26700 1.45104 65 2.46274 0.29854 3.02900 2.08315 67 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 66 2.31696 2.33207 2.82009 0.29473 68 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 67 2.36600 3.19301 0.22032 2.76728 69 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 68 2.36600 3.19301 0.22032 2.76728 70 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 69 2.46274 0.29854 3.02900 2.08315 71 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 70 2.36600 3.19301 0.22032 2.76728 72 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 71 2.36600 3.19301 0.22032 2.76728 73 G - - _ 1.38629 1.38629 1.38629 1.38629 0.13541 3.80431 2.25986 1.46634 0.26236 1.09861 0.40547 72 1.82545 1.47890 1.53614 0.92696 74 u - - > 1.38629 1.38629 1.38629 1.38629 0.04975 3.71865 3.71865 1.46634 0.26236 0.35548 1.20678 73 2.72048 0.44246 2.42364 1.59405 75 C - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 74 2.49495 0.64541 2.18363 1.27146 76 C - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 75 2.28943 0.72850 1.88278 1.33227 77 c - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 76 1.73973 1.46690 1.14900 1.28432 78 g - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 77 1.68463 1.53455 0.82585 1.82589 79 g - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 78 1.70148 1.42080 1.25049 1.23891 80 u - - > 1.38629 1.38629 1.38629 1.38629 0.26040 1.57513 3.80431 0.20287 1.69491 1.09861 0.40547 79 2.31625 2.53519 0.31517 2.38110 82 G - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 80 2.03334 0.58654 2.59335 1.43512 83 C - - - 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 81 2.14633 2.77702 0.28891 2.63410 84 G - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 82 2.14436 2.77469 0.28970 2.63106 85 G - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 83 2.29391 1.96081 1.96606 0.48066 86 U - - > 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 84 2.46274 0.29854 3.02900 2.08315 87 C - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 85 0.37033 2.49017 2.20156 2.15445 88 A - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 86 0.21988 2.92119 2.67703 2.59361 89 A - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 87 0.21988 2.92119 2.67703 2.59361 90 A - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 88 0.21988 2.92119 2.67703 2.59361 91 A - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 89 2.31696 2.33207 2.82009 0.29473 92 U - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 90 1.93656 0.71800 2.49058 1.25453 93 c - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 91 1.17759 1.51043 2.06368 1.06659 94 u - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 92 0.48796 2.28406 2.25666 1.71729 95 A - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 93 1.34183 1.71243 2.13140 0.82204 96 u - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 94 2.46274 0.29855 3.02900 2.08315 97 C - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 95 2.46274 0.29855 3.02900 2.08315 98 C - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 96 2.36600 3.19301 0.22032 2.76728 99 G - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 97 2.46274 0.29854 3.02900 2.08315 100 C - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 98 1.85042 0.93932 2.39239 1.02020 101 c - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 99 2.36600 3.19301 0.22032 2.76728 102 G - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 100 2.36600 3.19301 0.22032 2.76728 103 G - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 101 0.21988 2.92119 2.67703 2.59361 104 A - - : 1.38629 1.38629 1.38629 1.38629 0.04557 3.80431 3.80431 1.46634 0.26236 1.09861 0.40547 102 2.36600 3.19301 0.22032 2.76728 105 G - - : 1.38629 1.38629 1.38629 1.38629 0.02305 3.78178 * 1.46634 0.26236 0.00000 * //