# STOCKHOLM 1.0
#=GF ID Esr41
#=GF AC RF02676
#=GF DE Enterohemorrhagic E. coli sRNA 41
#=GF AU Argasinska J; 0000-0003-2678-2824
#=GF GA 102.0
#=GF NC 37.9
#=GF TC 103.4
#=GF SE Argasinska J
#=GF SS Predicted; PMID:24646762;
#=GF TP Gene; sRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR SO; 0000370; small_regulatory_ncRNA;
#=GF DR GO; 2000147; positive regulation of cell motility;
#=GF RN [1]
#=GF RM 24646762
#=GF RT A novel small regulatory RNA enhances cell motility in enterohemorrhagic
#=GF RT Escherichia coli.
#=GF RA Sudo N, Soma A, Muto A, Iyoda S, Suh M, Kurihara N, Abe H, Tobe T, Ogura
#=GF RA Y, Hayashi T, Kurokawa K, Ohnishi M, Sekine Y
#=GF RL J Gen Appl Microbiol. 2014;60:44-50.
#=GF CC Enhances cell motility in both enterohemorrhagic E.coli O157:H7 and
#=GF CC nonpathogenic E. coli K12. However, the sequence is specific to O157:H7
#=GF CC and not present in K12.
#=GF WK Escherichia_coli_sRNA
#=GF SQ 3

CP001368.1/1366278-1366351 GAUGCUCUAGGCAUCACAUUUUCUCCAUGGGGUAUUCCCUCCGCCGGCACUAUGUGUUGCUGGCGUUUUUUUAU
CP000036.1/4399199-4399126 GGUGCUCUAGGCAUCACAUUUUCUCCAUGGGGUAUUCCCUCCGCCGGCACUAUGUGUUGCUGGCGUUUUUUUAU
CU928162.2/4857198-4857271 GGUGCUCUAGGCAUCACAUUUUCUCCAUGGGGUAUUCCCUACGCCGGCACUAUGUGUUGCUGGCGUUUUUUUAU
#=GC SS_cons               <<<<<<___>>>>>>:::::::::::::<<<<___>>>>::<<<<<<<<________>>>>>>>>:::::::::
#=GC RF                    GauGCuCUAgGCauCACAUUUUCUCCAUGGGgUAUuCCCUcCGCCgGCaCUAUGUGUuGCuGGCGUUUUUUUAU
//
