INFERNAL1/a [1.1.5 | Sep 2023] NAME Spy491738 ACC RF02643 DESC S. pyogenes small RNA Spy491738 STATES 269 NODES 73 CLEN 85 W 104 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 14:41:32 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02643/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 1.097656 CKSUM 4247134892 NULL 0.000 0.000 0.000 0.000 GA 91.00 TC 103.50 NC 42.00 EFP7GF -6.2172 0.71871 ECMLC 0.57948 -9.48436 0.78840 1600000 461832 0.002598 ECMGC 0.35595 -16.25037 -2.81928 1600000 47679 0.008389 ECMLI 0.46347 -9.62793 2.61240 1600000 349093 0.003437 ECMGI 0.41755 -9.57126 1.61867 1600000 42779 0.009350 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 104 125 -6.559 -6.766 -0.070 -5.180 IL 1 1 2 1 4 6 37 107 129 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 5 37 106 128 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 5 35 104 125 -7.607 -0.026 -6.261 1.511 -1.672 -1.373 -1.153 D 4 2 3 5 3 2 33 102 124 -6.174 -1.687 -0.566 IL 5 5 3 5 3 5 36 105 127 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 4 34 103 124 -7.607 -0.026 -6.261 1.511 -1.672 -1.373 -1.153 D 7 5 3 8 3 2 33 101 123 -6.174 -1.687 -0.566 IL 8 8 3 8 3 4 35 104 126 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 2 3 33 102 123 -7.916 -0.006 -0.829 -1.913 1.467 -1.298 D 10 8 3 11 2 2 32 101 122 -8.445 -0.004 IL 11 11 3 11 2 3 34 103 124 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 4 ] - - - - - - B 12 11 3 124 13 2 32 101 122 [ BEGR 44 ] - - - - - - S 13 12 1 14 3 0 1 52 71 -7.607 -0.026 -6.261 IL 14 14 2 14 3 1 1 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 53 - A - - - ML 15 14 2 17 3 1 2 52 71 -7.607 -0.026 -6.261 1.511 -1.672 -1.373 -1.153 D 16 14 2 17 3 0 0 50 70 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 1 54 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 54 - A - - - ML 18 17 3 20 3 1 1 50 70 -7.607 -0.026 -6.261 1.511 -1.672 -1.373 -1.153 D 19 17 3 20 3 0 0 49 69 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 55 - U - - - ML 21 20 3 23 3 1 1 49 69 -7.607 -0.026 -6.261 -0.861 -0.976 -1.553 1.379 D 22 20 3 23 3 0 0 48 68 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 56 - A - - - ML 24 23 3 26 3 1 1 48 68 -7.607 -0.026 -6.261 1.511 -1.672 -1.373 -1.153 D 25 23 3 26 3 0 0 47 67 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 57 - A - - - ML 27 26 3 29 3 1 1 47 67 -7.607 -0.026 -6.261 1.511 -1.672 -1.373 -1.153 D 28 26 3 29 3 0 0 46 65 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 58 - C - - - ML 30 29 3 32 3 1 1 46 66 -7.607 -0.026 -6.261 -0.927 1.303 -1.708 -0.512 D 31 29 3 32 3 0 0 45 64 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 59 - A - - - ML 33 32 3 35 3 1 1 45 64 -7.607 -0.026 -6.261 1.001 -1.143 -0.195 -0.574 D 34 32 3 35 3 0 0 44 63 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 60 - C - - - ML 36 35 3 38 3 1 1 44 63 -7.607 -0.026 -6.261 -0.927 1.303 -1.708 -0.512 D 37 35 3 38 3 0 0 43 62 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 61 - A - - - ML 39 38 3 41 3 1 1 43 62 -7.607 -0.026 -6.261 1.511 -1.672 -1.373 -1.153 D 40 38 3 41 3 0 0 42 61 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 62 - G - - - ML 42 41 3 44 5 1 1 42 61 -6.787 -0.048 -6.602 -6.815 -7.706 -0.829 -1.913 1.467 -1.298 D 43 41 3 44 5 0 0 41 60 -4.959 -0.803 -4.221 -2.596 -2.508 IL 44 44 3 44 5 1 1 42 61 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 55 ] 63 88 u a - - MP 45 44 3 49 6 2 2 41 60 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -3.548 -3.333 -3.450 0.317 -2.545 -4.068 1.763 -3.189 -3.465 0.704 -3.866 -1.246 2.890 -3.716 -0.238 -2.342 ML 46 44 3 49 6 1 1 39 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 3 49 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 3 49 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 64 87 u a - - MP 51 50 6 55 6 2 2 39 58 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -3.548 -3.333 -3.450 0.317 -2.545 -4.068 1.763 -3.189 -3.465 0.704 -3.866 -1.246 2.890 -3.716 -0.238 -2.342 ML 52 50 6 55 6 1 1 37 57 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 57 ] 65 86 G C - - MP 57 56 6 61 6 2 2 37 56 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -3.498 -2.479 -3.546 1.459 -3.787 -4.234 0.617 -3.771 -3.473 3.043 -3.918 -0.140 0.272 -3.615 -1.359 -2.451 ML 58 56 6 61 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 1 35 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 58 ] 66 85 a u - - MP 63 62 6 67 6 2 2 35 54 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -3.287 -2.460 -3.333 2.848 -3.421 -4.455 0.853 -3.398 -3.253 1.638 -3.773 -0.032 0.428 -3.726 -1.094 -2.203 ML 64 62 6 67 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 59 ] 67 84 u g - - MP 69 68 6 73 4 2 2 33 52 -6.559 -6.766 -0.070 -5.180 -3.428 -3.311 -3.276 0.285 -2.267 -3.815 1.997 -2.965 -3.312 0.608 -3.674 -1.330 1.257 -3.570 2.405 -2.218 ML 70 68 6 73 4 1 1 33 53 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 4 1 1 33 52 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 72 68 6 73 4 0 0 32 51 -4.568 -4.250 -2.265 -0.520 IL 73 73 5 73 4 1 1 35 54 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 74 74 6 74 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 68 - g - - - ML 75 74 6 77 3 1 1 30 49 -7.607 -0.026 -6.261 0.140 -1.282 0.895 -0.674 D 76 74 6 77 3 0 0 29 48 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 69 - A - - - ML 78 77 3 80 3 1 1 29 48 -8.024 -0.024 -6.342 1.511 -1.672 -1.373 -1.153 D 79 77 3 80 3 0 0 28 47 -5.620 -0.734 -1.403 IL 80 80 3 80 3 1 1 30 49 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 62 ] - 83 - A - - MR 81 80 3 83 3 1 1 28 47 -8.024 -0.024 -6.342 1.511 -1.672 -1.373 -1.153 D 82 80 3 83 3 0 0 26 45 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 1 29 48 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 63 ] - 82 - g - - MR 84 83 3 86 5 1 1 27 46 -6.787 -0.048 -6.602 -6.815 -7.706 0.195 -1.255 0.846 -0.647 D 85 83 3 86 5 0 0 26 44 -5.352 -0.707 -2.978 -4.409 -2.404 IR 86 86 3 86 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 64 ] 70 81 u a - - MP 87 86 3 91 6 2 2 26 45 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -3.548 -3.333 -3.450 0.317 -2.545 -4.068 1.763 -3.189 -3.465 0.704 -3.866 -1.246 2.890 -3.716 -0.238 -2.342 ML 88 86 3 91 6 1 1 25 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 3 91 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 3 91 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 26 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 65 ] 71 80 G C - - MP 93 92 6 97 6 2 2 24 43 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -4.055 -2.773 -4.115 0.636 -4.266 -4.404 0.209 -4.290 -3.843 3.417 -4.235 -0.458 -0.201 -4.009 -1.797 -3.003 ML 94 92 6 97 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 23 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 24 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 66 ] 72 79 g u - - MP 99 98 6 103 6 2 2 22 41 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -3.064 -2.138 -3.182 1.842 -3.563 -4.289 0.684 -3.342 -3.053 1.943 -3.567 2.001 0.384 -3.513 -1.229 -2.040 ML 100 98 6 103 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 20 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 67 ] 73 78 G C - - MP 105 104 6 109 4 2 2 20 39 -6.559 -6.766 -0.070 -5.180 -4.055 -2.773 -4.115 0.636 -4.266 -4.404 0.209 -4.290 -3.843 3.417 -4.235 -0.458 -0.201 -4.009 -1.797 -3.003 ML 106 104 6 109 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 108 104 6 109 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 109 109 5 109 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 110 110 6 110 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 74 - G - - - ML 111 110 6 113 3 1 1 16 35 -7.607 -0.026 -6.261 -0.829 -1.913 1.467 -1.298 D 112 110 6 113 3 0 0 16 35 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 75 - a - - - ML 114 113 3 116 3 1 1 15 34 -7.607 -0.026 -6.261 0.906 -0.373 -0.895 -0.294 D 115 113 3 116 3 0 0 15 33 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 76 - A - - - ML 117 116 3 119 3 1 1 13 32 -7.607 -0.026 -6.261 1.001 -1.143 -0.195 -0.574 D 118 116 3 119 3 0 0 13 32 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 77 - A - - - ML 120 119 3 122 2 1 1 1 1 * 0.000 1.511 -1.672 -1.373 -1.153 D 121 119 3 122 2 0 0 0 0 * 0.000 IL 122 122 3 122 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 72 ] - - - - - - E 123 122 3 -1 0 0 0 0 0 [ BEGL 5 ] - - - - - - S 124 12 1 125 1 0 5 64 84 0.000 [ BIF 6 ] - - - - - - B 125 124 1 126 182 0 5 64 84 [ BEGL 7 ] - - - - - - S 126 125 1 127 4 0 0 32 51 -0.051 -6.650 -6.058 -6.698 [ MATP 8 ] 4 21 u a - - MP 127 126 1 131 6 2 2 32 51 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -3.548 -3.333 -3.450 0.317 -2.545 -4.068 1.763 -3.189 -3.465 0.704 -3.866 -1.246 2.890 -3.716 -0.238 -2.342 ML 128 126 1 131 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 129 126 1 131 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 130 126 1 131 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 131 131 5 131 6 1 1 32 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 132 132 6 132 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 5 20 C G - - MP 133 132 6 137 6 2 2 30 49 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -3.874 -3.704 -3.669 -0.011 -2.559 -4.166 3.267 -3.296 -3.704 0.361 -4.029 -1.644 1.012 -3.982 -0.257 -2.570 ML 134 132 6 137 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 135 132 6 137 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 136 132 6 137 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 137 137 5 137 6 1 1 30 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 138 138 6 138 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 6 19 u a - - MP 139 138 6 143 6 2 2 28 47 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -3.548 -3.333 -3.450 0.317 -2.545 -4.068 1.763 -3.189 -3.465 0.704 -3.866 -1.246 2.890 -3.716 -0.238 -2.342 ML 140 138 6 143 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 141 138 6 143 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 142 138 6 143 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 143 143 5 143 6 1 1 28 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 144 144 6 144 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 7 18 G C - - MP 145 144 6 149 6 2 2 26 45 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -4.055 -2.773 -4.115 0.636 -4.266 -4.404 0.209 -4.290 -3.843 3.417 -4.235 -0.458 -0.201 -4.009 -1.797 -3.003 ML 146 144 6 149 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 147 144 6 149 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 148 144 6 149 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 149 149 5 149 6 1 1 26 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 150 150 6 150 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 8 17 u a - - MP 151 150 6 155 6 2 2 24 43 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -3.548 -3.333 -3.450 0.317 -2.545 -4.068 1.763 -3.189 -3.465 0.704 -3.866 -1.246 2.890 -3.716 -0.238 -2.342 ML 152 150 6 155 6 1 1 23 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 153 150 6 155 6 1 1 23 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 154 150 6 155 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 155 155 5 155 6 1 1 24 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 156 156 6 156 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 9 16 u a - - MP 157 156 6 161 6 2 2 22 41 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -3.548 -3.333 -3.450 0.317 -2.545 -4.068 1.763 -3.189 -3.465 0.704 -3.866 -1.246 2.890 -3.716 -0.238 -2.342 ML 158 156 6 161 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 159 156 6 161 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 160 156 6 161 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 161 161 5 161 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 162 162 6 162 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 10 15 u a - - MP 163 162 6 167 4 2 2 20 39 -6.559 -6.766 -0.070 -5.180 -3.548 -3.333 -3.450 0.317 -2.545 -4.068 1.763 -3.189 -3.465 0.704 -3.866 -1.246 2.890 -3.716 -0.238 -2.342 ML 164 162 6 167 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 165 162 6 167 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 166 162 6 167 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 167 167 5 167 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 168 168 6 168 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 11 - g - - - ML 169 168 6 171 3 1 1 16 35 -7.607 -0.026 -6.261 -0.181 -0.442 0.651 -0.301 D 170 168 6 171 3 0 0 16 34 -6.174 -1.687 -0.566 IL 171 171 3 171 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 12 - A - - - ML 172 171 3 174 3 1 1 15 34 -7.607 -0.026 -6.261 1.511 -1.672 -1.373 -1.153 D 173 171 3 174 3 0 0 15 33 -6.174 -1.687 -0.566 IL 174 174 3 174 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 13 - g - - - ML 175 174 3 177 3 1 1 13 32 -7.607 -0.173 -3.216 -0.275 -0.995 0.760 -0.031 D 176 174 3 177 3 0 0 13 32 -6.174 -1.687 -0.566 IL 177 177 3 177 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 14 - A - - - ML 178 177 3 180 2 1 1 1 1 * 0.000 1.391 -1.409 -1.133 -0.874 D 179 177 3 180 2 0 0 0 0 * 0.000 IL 180 180 3 180 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 19 ] - - - - - - E 181 180 3 -1 0 0 0 0 0 [ BEGR 20 ] - - - - - - S 182 125 1 183 3 0 0 45 66 -7.607 -0.026 -6.261 IL 183 183 2 183 3 1 1 48 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - A - - - ML 184 183 2 186 3 1 1 45 66 -7.607 -0.026 -6.261 1.511 -1.672 -1.373 -1.153 D 185 183 2 186 3 0 0 44 64 -6.174 -1.687 -0.566 IL 186 186 3 186 3 1 1 47 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - g - - - ML 187 186 3 189 3 1 1 44 65 -7.607 -0.026 -6.261 0.195 -1.255 0.846 -0.647 D 188 186 3 189 3 0 0 43 63 -6.174 -1.687 -0.566 IL 189 189 3 189 3 1 1 46 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - C - - - ML 190 189 3 192 3 1 1 43 64 -7.607 -0.026 -6.261 -0.927 1.303 -1.708 -0.512 D 191 189 3 192 3 0 0 42 62 -6.174 -1.687 -0.566 IL 192 192 3 192 3 1 1 45 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - u - - - ML 193 192 3 195 3 1 1 42 63 -7.607 -0.026 -6.261 -0.483 -0.116 -1.206 0.947 D 194 192 3 195 3 0 0 41 61 -6.174 -1.687 -0.566 IL 195 195 3 195 3 1 1 44 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - C - - - ML 196 195 3 198 3 1 1 41 61 -7.607 -0.026 -6.261 -0.927 1.303 -1.708 -0.512 D 197 195 3 198 3 0 0 40 60 -6.174 -1.687 -0.566 IL 198 198 3 198 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - A - - - ML 199 198 3 201 3 1 1 40 60 -7.607 -0.026 -6.261 1.511 -1.672 -1.373 -1.153 D 200 198 3 201 3 0 0 38 59 -6.174 -1.687 -0.566 IL 201 201 3 201 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - G - - - ML 202 201 3 204 3 1 1 39 59 -7.607 -0.026 -6.261 -0.829 -1.913 1.467 -1.298 D 203 201 3 204 3 0 0 37 58 -6.174 -1.687 -0.566 IL 204 204 3 204 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - G - - - ML 205 204 3 207 3 1 1 38 58 -7.607 -0.026 -6.261 -0.829 -1.913 1.467 -1.298 D 206 204 3 207 3 0 0 36 57 -6.174 -1.687 -0.566 IL 207 207 3 207 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - U - - - ML 208 207 3 210 3 1 1 37 57 -7.607 -0.026 -6.261 -0.861 -0.976 -1.553 1.379 D 209 207 3 210 3 0 0 35 56 -6.174 -1.687 -0.566 IL 210 210 3 210 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - C - - - ML 211 210 3 213 3 1 1 36 56 -7.607 -0.026 -6.261 -0.927 1.303 -1.708 -0.512 D 212 210 3 213 3 0 0 34 55 -6.174 -1.687 -0.566 IL 213 213 3 213 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - A - - - ML 214 213 3 216 3 1 1 35 55 -7.607 -0.026 -6.261 1.511 -1.672 -1.373 -1.153 D 215 213 3 216 3 0 0 33 54 -6.174 -1.687 -0.566 IL 216 216 3 216 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - A - - - ML 217 216 3 219 5 1 1 34 54 -6.787 -0.048 -6.602 -6.815 -7.706 1.511 -1.672 -1.373 -1.153 D 218 216 3 219 5 0 0 32 53 -4.959 -0.803 -4.221 -2.596 -2.508 IL 219 219 3 219 5 1 1 34 54 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 34 52 G C - - MP 220 219 3 224 6 2 2 33 53 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -4.055 -2.773 -4.115 0.636 -4.266 -4.404 0.209 -4.290 -3.843 3.417 -4.235 -0.458 -0.201 -4.009 -1.797 -3.003 ML 221 219 3 224 6 1 1 31 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 222 219 3 224 6 1 1 31 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 223 219 3 224 6 0 0 29 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 224 224 5 224 6 1 1 32 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 225 225 6 225 5 1 1 32 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 35 51 u a - - MP 226 225 6 230 6 2 2 31 51 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -3.548 -3.333 -3.450 0.317 -2.545 -4.068 1.763 -3.189 -3.465 0.704 -3.866 -1.246 2.890 -3.716 -0.238 -2.342 ML 227 225 6 230 6 1 1 29 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 228 225 6 230 6 1 1 29 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 229 225 6 230 6 0 0 27 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 230 230 5 230 6 1 1 30 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 231 231 6 231 5 1 1 30 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 36 50 a u - - MP 232 231 6 236 6 2 2 29 49 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -3.287 -2.460 -3.333 2.848 -3.421 -4.455 0.853 -3.398 -3.253 1.638 -3.773 -0.032 0.428 -3.726 -1.094 -2.203 ML 233 231 6 236 6 1 1 27 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 234 231 6 236 6 1 1 27 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 235 231 6 236 6 0 0 25 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 236 236 5 236 6 1 1 28 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 237 237 6 237 5 1 1 28 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 37 49 a u - - MP 238 237 6 242 6 2 2 27 47 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -3.287 -2.460 -3.333 2.848 -3.421 -4.455 0.853 -3.398 -3.253 1.638 -3.773 -0.032 0.428 -3.726 -1.094 -2.203 ML 239 237 6 242 6 1 1 25 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 240 237 6 242 6 1 1 25 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 241 237 6 242 6 0 0 23 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 242 242 5 242 6 1 1 26 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 243 243 6 243 5 1 1 26 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 38 48 G C - - MP 244 243 6 248 6 2 2 25 45 -8.971 -8.910 -0.023 -7.687 -7.967 -8.362 -4.055 -2.773 -4.115 0.636 -4.266 -4.404 0.209 -4.290 -3.843 3.417 -4.235 -0.458 -0.201 -4.009 -1.797 -3.003 ML 245 243 6 248 6 1 1 24 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 246 243 6 248 6 1 1 23 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 247 243 6 248 6 0 0 22 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 248 248 5 248 6 1 1 24 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 249 249 6 249 5 1 1 24 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 39 47 u a - - MP 250 249 6 254 4 2 2 23 43 -6.559 -6.766 -0.070 -5.180 -3.548 -3.333 -3.450 0.317 -2.545 -4.068 1.763 -3.189 -3.465 0.704 -3.866 -1.246 2.890 -3.716 -0.238 -2.342 ML 251 249 6 254 4 1 1 23 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 252 249 6 254 4 1 1 22 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 253 249 6 254 4 0 0 21 42 -4.568 -4.250 -2.265 -0.520 IL 254 254 5 254 4 1 1 24 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 255 255 6 255 3 1 1 23 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - g - - - ML 256 255 6 258 3 1 1 20 41 -3.280 -0.178 -6.261 0.140 -1.282 0.895 -0.674 D 257 255 6 258 3 0 0 17 37 -6.174 -1.687 -0.566 IL 258 258 3 258 3 1 1 22 42 -1.312 -0.848 -4.580 0.000 0.000 0.000 0.000 [ MATL 40 ] 43 - c - - - ML 259 258 3 261 3 1 1 16 34 -7.607 -0.026 -6.261 -0.512 0.744 -1.273 0.275 D 260 258 3 261 3 0 0 15 33 -6.174 -1.687 -0.566 IL 261 261 3 261 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 44 - u - - - ML 262 261 3 264 3 1 1 14 30 -3.326 -0.173 -6.261 0.471 -0.686 -0.874 0.533 D 263 261 3 264 3 0 0 12 28 -6.174 -1.687 -0.566 IL 264 264 3 264 3 1 1 15 31 -1.670 -0.650 -4.370 0.000 0.000 0.000 0.000 [ MATL 42 ] 46 - C - - - ML 265 264 3 267 2 1 1 1 1 * 0.000 -0.927 1.303 -1.708 -0.512 D 266 264 3 267 2 0 0 0 0 * 0.000 IL 267 267 3 267 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 43 ] - - - - - - E 268 267 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME Spy491738 ACC RF02643 DESC S. pyogenes small RNA Spy491738 LENG 85 MAXL 180 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 7 14:41:32 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02643/CM NSEQ 4 EFFN 1.722656 CKSUM 4247134892 STATS LOCAL MSV -8.4594 0.71871 STATS LOCAL VITERBI -9.7535 0.71871 STATS LOCAL FORWARD -2.7289 0.71871 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.12963 1.57508 1.40461 1.49436 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 0.00000 * 1 0.22080 2.91745 2.67367 2.58951 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 2 0.22080 2.91745 2.67367 2.58951 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 3 2.36199 3.18834 0.22140 2.76259 3 G - - : 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 4 2.64405 1.66366 2.34793 0.44018 4 U - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 5 2.88414 0.33250 2.61228 1.87341 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 6 2.63958 1.66365 2.34630 0.44093 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 7 2.38248 2.90355 0.22938 2.85034 7 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 8 2.63745 1.66364 2.34552 0.44128 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 9 2.63675 1.66364 2.34526 0.44140 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 10 2.63620 1.66364 2.34506 0.44149 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 11 1.64436 1.71988 0.79146 1.74529 11 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 12 0.22080 2.91745 2.67367 2.58951 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 13 1.71498 2.22666 0.73211 1.46425 13 g - - _ 1.38629 1.38629 1.38629 1.38629 0.18558 3.74046 1.92668 1.46634 0.26236 1.09861 0.40547 14 0.29590 2.66041 2.44228 2.31003 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05560 3.61047 3.61047 1.46634 0.26236 0.28222 1.40285 15 0.50259 2.52248 1.50031 2.38906 15 A - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 16 0.50255 2.52259 1.50031 2.38920 16 A - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 17 0.50254 2.52263 1.50031 2.38927 17 A - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 18 3.06275 0.26925 2.73186 2.08595 18 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 19 0.50270 2.52214 1.50032 2.38859 19 A - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 20 2.14422 2.77345 0.28981 2.63127 20 G - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 21 0.50375 2.51902 1.50036 2.38430 21 A - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 22 0.22080 2.91745 2.67367 2.58951 22 A - - , 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 23 1.28765 2.44863 0.67956 2.03383 23 G - - , 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 24 2.45828 0.29996 3.02435 2.07961 24 C - - , 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 25 1.88184 1.46491 2.39811 0.64302 25 U - - , 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 26 2.45828 0.29996 3.02435 2.07961 26 C - - , 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 27 0.22080 2.91745 2.67367 2.58951 27 A - - , 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 28 2.36199 3.18834 0.22140 2.76259 28 G - - , 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 29 2.36199 3.18834 0.22140 2.76259 29 G - - , 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 30 2.31357 2.32929 2.81650 0.29583 30 U - - , 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 31 2.45828 0.29996 3.02435 2.07961 31 C - - , 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 32 0.22080 2.91745 2.67367 2.58951 32 A - - , 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 33 0.22080 2.91745 2.67367 2.58951 33 A - - , 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 34 2.38185 2.90292 0.22956 2.84943 34 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 35 2.63787 1.66365 2.34567 0.44121 35 U - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 36 0.49999 2.40505 1.57057 2.35101 36 A - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 37 0.50004 2.40491 1.57056 2.35079 37 A - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 38 2.38134 2.90242 0.22971 2.84870 38 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 39 2.63628 1.66364 2.34509 0.44148 39 U - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 40 1.33859 2.47655 0.64147 2.06172 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.19061 1.89845 3.74046 0.80510 0.59248 1.09861 0.40547 41 1.92343 0.73902 2.47620 1.23014 43 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 42 1.03751 1.94285 2.09078 0.97081 44 u - - _ 1.38629 1.38629 1.38629 1.38629 0.18558 1.92668 3.74046 0.29923 1.35243 1.09861 0.40547 43 2.45828 0.29996 3.02435 2.07961 46 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 44 0.50258 2.52250 1.50031 2.38909 47 A - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 45 3.06290 0.26923 2.73192 2.08597 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 46 2.58030 1.82871 2.21974 0.42313 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 47 2.57968 1.82867 2.21955 0.42325 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 48 0.50290 2.52155 1.50033 2.38778 51 A - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 49 3.05176 0.27065 2.72744 2.08380 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 50 0.22080 2.91745 2.67367 2.58951 53 A - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 51 0.22080 2.91745 2.67367 2.58951 54 A - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 52 2.31357 2.32929 2.81650 0.29583 55 U - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 53 0.22080 2.91745 2.67367 2.58951 56 A - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 54 0.22080 2.91745 2.67367 2.58951 57 A - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 55 2.45828 0.29996 3.02435 2.07961 58 C - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 56 0.61185 2.33943 1.51614 1.95394 59 A - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 57 2.45828 0.29996 3.02435 2.07961 60 C - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 58 0.22080 2.91745 2.67367 2.58951 61 A - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 59 2.36199 3.18834 0.22140 2.76259 62 G - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 60 2.63752 1.66364 2.34554 0.44127 63 U - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 61 2.63791 1.66365 2.34569 0.44120 64 U - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 62 1.61672 2.45255 0.47762 2.35259 65 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 63 0.50004 2.40492 1.57056 2.35080 66 A - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 64 2.64584 1.42987 2.39436 0.51336 67 U - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 65 1.33859 2.47655 0.64147 2.06172 68 G - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 66 0.22080 2.91745 2.67367 2.58951 69 A - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 67 2.63321 1.66363 2.34396 0.44199 70 U - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 68 2.38090 2.90197 0.22984 2.84805 71 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 69 1.31265 2.47048 0.60080 2.32303 72 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 70 2.38163 2.90270 0.22963 2.84911 73 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 71 2.36199 3.18834 0.22140 2.76259 74 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 72 0.67451 1.64640 2.13582 1.71646 75 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 73 0.61185 2.33943 1.51614 1.95394 76 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 74 0.22080 2.91745 2.67367 2.58951 77 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 75 3.06722 0.26868 2.73365 2.08681 78 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 76 2.54275 1.54430 2.27547 0.50229 79 U - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 77 3.07160 0.26813 2.73540 2.08766 80 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 78 0.50164 2.52530 1.50028 2.39295 81 A - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 79 1.28765 2.44863 0.67956 2.03383 82 G - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 80 0.22080 2.91745 2.67367 2.58951 83 A - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 81 1.92811 2.56583 0.37599 2.39564 84 G - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 82 2.58035 1.82871 2.21976 0.42313 85 U - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 83 2.58234 0.55003 2.26990 1.40998 86 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 84 0.50288 2.52160 1.50033 2.38784 87 A - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 85 0.50342 2.52002 1.50035 2.38567 88 A - - > 1.38629 1.38629 1.38629 1.38629 0.02462 3.71643 * 1.46634 0.26236 0.00000 * //