# STOCKHOLM 1.0
#=GF ID Hrs1
#=GF AC RF02628
#=GF DE Hfq-regulated sRNA 1
#=GF AU Argasinska J; 0000-0003-2678-2824
#=GF GA 56.4
#=GF NC 56.0
#=GF TC 56.4
#=GF SE Argasinska J
#=GF SS Predicted; RNAfold;
#=GF TP Gene; sRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR SO; 0000370; small_regulatory_ncRNA;
#=GF DR GO; 0005515; protein binding;
#=GF RN [1]
#=GF RM 24885615
#=GF RT Genome-wide identification of Hfq-regulated small RNAs in the fire blight
#=GF RT pathogen Erwinia amylovora discovered small RNAs with virulence regulatory
#=GF RT function.
#=GF RA Zeng Q, Sundin GW
#=GF RL BMC Genomics. 2014;15:414.
#=GF WK Hfq_binding_sRNA
#=GF SQ 2

FN666575.1/130143-130070 AAAAAAAACCCCGCCAUAAGGGCAGGGGUAGACAGGGAUGUGCCGGUGGCAAGGUAAACAGGGAUAAUGUGUUU
FP236842.1/124289-124216 AAAAAAAACCCCGCCAUCAUGGCGGGGGUAGACAGGGGUAUGUCUAUGGCAAGGAAAACAGGGAUAAUGUGUUA
#=GC SS_cons             :::::::<<<<<<<<_____>>>->>>>>:<<<<-<--<<<-<<-<<__________>>->>->>>->->>>>:
#=GC RF                  AAAAAAAaCCCCGCCAUaAuGGCaGGGGuAgaCaGgGaUaUGcCugUGGCAAGGuAAAcAGgGAuAAuGuGuuu
//
