# STOCKHOLM 1.0
#=GF ID AbsR11
#=GF AC RF02608
#=GF DE Acinetobacter sRNA 11
#=GF AU Argasinska J; 0000-0003-2678-2824
#=GF GA 158.0
#=GF NC 155.7
#=GF TC 160.4
#=GF SE Argasinska J
#=GF SS Predicted; RNAfold
#=GF TP Gene; sRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR SO; 0000370; small_regulatory_ncRNA;
#=GF RN [1]
#=GF RM 24705412
#=GF RT Identification of novel regulatory small RNAs in Acinetobacter baumannii.
#=GF RA Sharma R, Arya S, Patil SD, Sharma A, Jain PK, Navani NK, Pathania R
#=GF RL PLoS One. 2014;9:e93833.
#=GF CC Three sRNAs: AbsR11, AbsR25 and AbsR28 have been experimentally validated
#=GF CC in the MTCC 1425 (ATCC15308) strain, which is an MDR (multiple drug
#=GF CC resistance) strain showing resistance to 12 antibiotics. AbsR25 sRNA could
#=GF CC play a role in the efflux pump regulation and drug resistance.
#=GF WK Acinetobacter_baumannii
#=GF SQ 2

CP002177.1/1778400-1778599 UCAGCCUACUUUAUGUAUAGCUUAGUUUGUCGAUAUGAGGCAUAAUGCCCUACAACGUAGCGGUGUCAUAUAAUUGAGAAGUCUAAAUUUAAGGAUUAGCGUUCUCAAUCAUGCGACACUUUAAUCGCUAUCCCAUAUUUAAUUAGGGAAUGGGACUCUUCACCGAGGUUGUAAAAUGAGACAAACGAUUUUAGCUGUAU
CP000521.1/2529288-2529487 UCAGACGACUUUAUGUGUAGCUUAGUUUGUCGAUAUGAGGCAUAAUGCCCUACAACGUAGCGGUGUCACAUCAUUGAGAAGUCUAAUUUUUAAGACUAGCGUUCUCAAUCAUGCGACACUUUAAUCGCUAUCCCAUAUUUAAUUAGGGAAUGGGACUCUUCACCGAGGUUGUAAAAUGAGACAAACGAUUUUAGCUGUAU
#=GC SS_cons               ::::::::::::::[[[[[[[[--[[[[[[[,,,,,,,<<<<___>>>>,((((((,<<<<<<<<<<-<<<-<<<<<<<<<<<<________>>>>>----->>>>>>>->>>->>>>>------>>>>><<<<<<-<<<______>>>>>>>>><<<______>>>)))))),,,,,,]]]]]]]------]]]]]]]]
#=GC RF                    UCAGaCuACUUUAUgugcaGCuUAGuuuGuCGAUAUGAGGCaUAAuGCCCuaCaaCGuaGCGGuGuCAcauaauuGaGaaguCcAAaUUUaAgGacuAGCGUuCuCaauCaugCGaCaCUUUAAUCGCuauCCCauAuccAAUUAGggaauGGGaCuCUUCACCGaGGuuGuaAAAUGAGaCaaaCGAUUUUaGCugcac
//
