# STOCKHOLM 1.0
#=GF ID BASRCI153
#=GF AC RF02604
#=GF DE Brucella sRNA CI153
#=GF AU Argasinska J; 0000-0003-2678-2824
#=GF GA 137.0
#=GF NC 127.0
#=GF TC 145.8
#=GF SE Argasinska J
#=GF SS Predicted; RNAfold
#=GF TP Gene; sRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR SO; 0000370; small_regulatory_ncRNA;
#=GF RN [1]
#=GF RM 24673258
#=GF RT Identification of novel sRNAs in Brucella abortus 2308.
#=GF RA Dong H, Peng X, Wang N, Wu Q
#=GF RL FEMS Microbiol Lett. 2014;354:119-125.
#=GF CC Brucella abortus sRNA chromosome I, candidate 408
#=GF WK Brucella_sRNA
#=GF SQ 2

ADFB01000074.1/210466-210679 GCAUUUUCGAGCCAAAAGUGCGAAGCGCCUACGCGAGGAAAUCAGUCCACUGGACUGAUUUCUGAUCCCGCUUCGAUCCGUUGGAUAAUACGAUAAGACAAAUAAUUAGAGCGGUUCCAGUGACUCUGUUUUAACUGGAACUGCCUGGGCUACGGGCUCAAUUGGAUUAGCCUUGCCAUUCGGCAGGGCUUUUUCAUAGG
AM040264.1/1441442-1441655   GCAUUUUCGAGCCAAAAGUGCGAAGCGCCUACGCGGGGAAAUCAGUCCACUGGACUGAUUUCUGAUCCCGCUUCGAUGCAUUGGAAAAGGUGAUAAAAUAAAUAGUUAAGACGGUUCCAGCGACUCUGUUUUAACUGGAACUGCCUGGGCUUUGGGCUCAAUUGGAUUAGCCUUGCCAUUCGGCAGGGCUUUUCCAUAGG
#=GC SS_cons                 :((((((----((((--((((((((((<<<____>>><<<<<<<<<<<___>>>>>>>>>>>,,,,,,)))))))-)))-))))--))))))::::::::::<<<<<<<<<<<<-<<____>>-->>>>>>>>>>>>:::<<<<<<<--<<<<<--------<<<<--<<<<<<<<<____>>>>>>>>>-->>>>>>>>
#=GC RF                      GCgccuuCGAGCCaaAAGcgCGaaGCGCccACGCggGGaaauCaGuCCACUGGaCuGauuuCUGAUCCCGCuuCGAcgCauuGGAaaaggcGAUAAaAuAAAcaguuagggCgGUuCCAGuGaCUCcGcccuaacugGAACuGCCcGGGCcccgGGCUCAAUuGgaUUaGCCcuGCCAUUCGGCagGGCuUUucCacggg

ADFB01000074.1/210466-210679 GAUUACGGGCAGCG
AM040264.1/1441442-1441655   GAUUACGGGCAGCG
#=GC SS_cons                 >---->>>>>>>::
#=GC RF                      GAUUACgGGCaGCG
//
