# STOCKHOLM 1.0
#=GF ID BASRCII26
#=GF AC RF02603
#=GF DE Brucella sRNA CII26
#=GF AU Argasinska J; 0000-0003-2678-2824
#=GF GA 218.0
#=GF NC 108.8
#=GF TC 236.3
#=GF SE Argasinska J
#=GF SS Predicted; RNAfold
#=GF TP Gene; sRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR SO; 0000370; small_regulatory_ncRNA;
#=GF RN [1]
#=GF RM 24673258
#=GF RT Identification of novel sRNAs in Brucella abortus 2308.
#=GF RA Dong H, Peng X, Wang N, Wu Q
#=GF RL FEMS Microbiol Lett. 2014;354:119-125.
#=GF CC Brucella abortus sRNA chromosome II, candidate 26
#=GF WK Brucella_sRNA
#=GF SQ 2

ACEH01000014.1/37080-36891 UGGAAAGGCAGGCUUCGGCCUGCCUUUCCUGUUGCCCGAGACAGGACUUCCAACGUGCGGGGGGGCAACGGAAGUCCAUCUCGUCGUCUCAACCGGGAUUGAUCACGAUUGGUUCCACUCUGUCAAUCGUAGUUAUCUAAAAUAGUGAUUGCCCCACAGCAACGUGGCUGGACGGUAAAUUUUCCAUAAA
AM040265.1/181509-181697   UGGAAAGGCAGGCUUCGGCCUGCCUUUCCUGUUGCCCGAGACAGGACUUCCAACGUGCGGG-GGGCAACGGAAGUCCAUCUCGUCGUCUCAACCGGGAUUGAUCACGAUUGGUUCCACUCUGUCAAUCGUAGUUAUCUAAAAUAGUGAUUGCCCCACAGCAACGUGGCUGGACGGUAAAUUUUCCAUAAA
#=GC SS_cons               :<<<<<<<<<<<<____>>>>>>>>>>>>::[[[[[<<<<<--<<<<<<<<----<<<______>>>-->>>>>>>>->>>>>,,,,,,,,,((((<<<<<<-<<-<<-<<____>>->>>>>>>>>><<<<<<<<________>>>>>>>>,<<<<______>>>>)))),,]]]]]::::::::::::
#=GC RF                    UGGaaaGGCaGGCUUcGGCCuGCCuuuCCUGuugCCCGaGacAGGaCuuCCAAcGuGCGGGgGGGCaAcGGaaGuCCAuCuCGUcGUcUcAACCgGGauuGaUCacGaUuGGUUcCacuCuGuCaauCGcagucaccUAAAAUAgugacugCcCCaCAGcAAcGuGGCcGGAcGGcaaAUUUUccAUAAA
//
