INFERNAL1/a [1.1.5 | Sep 2023] NAME cyano_het_sRNA ACC RF02596 DESC Cyanobacteria heterocyst sRNA STATES 177 NODES 47 CLEN 56 W 72 ALPH RNA RF no CONS yes MAP yes DATE Sat Jul 13 06:17:05 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02596/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 2.192383 CKSUM 584548828 NULL 0.000 0.000 0.000 0.000 GA 35.70 TC 35.70 NC 35.60 EFP7GF -9.5439 0.71930 ECMLC 0.59991 -9.53823 1.06354 1600000 693987 0.001729 ECMGC 0.44070 -16.08016 -2.77166 1600000 141007 0.002837 ECMLI 0.55790 -8.61932 2.24197 1600000 513819 0.002335 ECMGI 0.47652 -11.76275 -0.01189 1600000 108125 0.003699 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 72 92 -7.052 -7.259 -0.049 -5.673 IL 1 1 2 1 4 1 14 76 96 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 14 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 12 72 92 -8.445 -0.018 -6.763 -1.787 -3.038 1.766 -2.425 D 4 2 3 5 3 0 11 71 91 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 12 73 93 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 57 - U - - MR 6 5 3 8 3 1 11 71 91 -8.445 -0.018 -6.763 -1.667 -1.632 -2.409 1.666 D 7 5 3 8 3 0 10 70 90 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 12 72 92 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 56 - U - - MR 9 8 3 11 2 1 10 70 90 -8.472 -0.004 -1.667 -1.632 -2.409 1.666 D 10 8 3 11 2 0 9 69 89 -4.432 -0.068 IR 11 11 3 11 2 1 11 71 91 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 4 ] - - - - - - B 12 11 3 13 66 0 9 69 89 [ BEGL 5 ] - - - - - - S 13 12 1 14 4 0 0 31 50 -0.043 -6.887 -6.294 -6.934 [ MATP 6 ] 2 18 G U - - MP 14 13 1 18 6 2 2 31 50 -9.148 -9.087 -0.021 -7.864 -8.144 -8.539 -3.742 -2.474 -3.919 1.053 -4.738 -5.466 -0.319 -3.926 -3.549 1.186 -4.078 3.204 -0.675 -4.644 -2.261 -2.594 ML 15 13 1 18 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 16 13 1 18 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 17 13 1 18 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 18 18 5 18 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 19 19 6 19 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 3 17 G C - - MP 20 19 6 24 4 2 2 29 48 -7.052 -7.259 -0.049 -5.673 -4.935 -3.187 -5.055 0.070 -5.504 -4.768 -0.821 -5.309 -4.452 3.681 -4.775 -0.894 -1.201 -4.594 -2.869 -3.928 ML 21 19 6 24 4 1 1 30 49 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 22 19 6 24 4 1 1 30 49 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 23 19 6 24 4 0 0 29 48 -4.568 -4.250 -2.265 -0.520 IL 24 24 5 24 4 1 1 31 51 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 25 25 6 25 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 4 - A - - - ML 26 25 6 28 5 1 1 27 46 -7.178 -0.037 -6.994 -7.206 -8.097 1.758 -2.568 -2.180 -2.130 D 27 25 6 28 5 0 0 26 44 -4.959 -0.803 -4.221 -2.596 -2.508 IL 28 28 3 28 5 1 1 27 46 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 5 16 U A - - MP 29 28 3 33 6 2 2 26 45 -9.148 -9.087 -0.021 -7.864 -8.144 -8.539 -4.421 -4.251 -4.233 -0.530 -3.127 -4.776 1.205 -3.839 -4.236 -0.308 -4.598 -2.143 3.428 -4.563 -0.798 -3.036 ML 30 28 3 33 6 1 1 25 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 31 28 3 33 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 32 28 3 33 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 33 33 5 33 6 1 1 26 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 34 34 6 34 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 6 15 G C - - MP 35 34 6 39 6 2 2 24 43 -9.148 -9.087 -0.021 -7.864 -8.144 -8.539 -4.935 -3.187 -5.055 0.070 -5.504 -4.768 -0.821 -5.309 -4.452 3.681 -4.775 -0.894 -1.201 -4.594 -2.869 -3.928 ML 36 34 6 39 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 37 34 6 39 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 38 34 6 39 6 0 0 22 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 39 39 5 39 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 40 40 6 40 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 7 14 U G - - MP 41 40 6 45 4 2 2 22 41 -7.052 -7.259 -0.049 -5.673 -4.294 -4.222 -3.949 -0.537 -2.646 -4.341 1.645 -3.437 -3.992 -0.379 -4.262 -2.217 0.769 -4.359 3.125 -2.853 ML 42 40 6 45 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 43 40 6 45 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 44 40 6 45 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 45 45 5 45 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 46 46 6 46 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 8 - U - - - ML 47 46 6 49 3 1 1 19 37 -8.061 -0.019 -6.715 -1.667 -1.632 -2.409 1.666 D 48 46 6 49 3 0 0 18 37 -6.174 -1.687 -0.566 IL 49 49 3 49 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 9 - G - - - ML 50 49 3 52 3 1 1 17 36 -8.061 -0.019 -6.715 -1.787 -3.038 1.766 -2.425 D 51 49 3 52 3 0 0 17 36 -6.174 -1.687 -0.566 IL 52 52 3 52 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 10 - U - - - ML 53 52 3 55 3 1 1 16 35 -8.061 -0.019 -6.715 -1.667 -1.632 -2.409 1.666 D 54 52 3 55 3 0 0 16 34 -6.174 -1.687 -0.566 IL 55 55 3 55 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 11 - U - - - ML 56 55 3 58 3 1 1 15 33 -8.061 -0.019 -6.715 -1.667 -1.632 -2.409 1.666 D 57 55 3 58 3 0 0 15 33 -6.174 -1.687 -0.566 IL 58 58 3 58 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 12 - A - - - ML 59 58 3 61 3 1 1 13 31 -8.061 -0.019 -6.715 1.758 -2.568 -2.180 -2.130 D 60 58 3 61 3 0 0 13 32 -6.174 -1.687 -0.566 IL 61 61 3 61 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 13 - U - - - ML 62 61 3 64 2 1 1 1 1 * 0.000 -1.667 -1.632 -2.409 1.666 D 63 61 3 64 2 0 0 0 0 * 0.000 IL 64 64 3 64 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 18 ] - - - - - - E 65 64 3 -1 0 0 0 0 0 [ BEGR 19 ] - - - - - - S 66 12 1 67 3 0 0 51 70 -8.061 -0.019 -6.715 IL 67 67 2 67 3 1 1 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 19 - G - - - ML 68 67 2 70 3 1 1 51 70 -8.061 -0.019 -6.715 -1.787 -3.038 1.766 -2.425 D 69 67 2 70 3 0 0 50 69 -6.174 -1.687 -0.566 IL 70 70 3 70 3 1 1 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 20 - G - - - ML 71 70 3 73 3 1 1 50 69 -8.061 -0.019 -6.715 -1.787 -3.038 1.766 -2.425 D 72 70 3 73 3 0 0 49 68 -6.174 -1.687 -0.566 IL 73 73 3 73 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 21 - A - - - ML 74 73 3 76 3 1 1 49 68 -8.061 -0.019 -6.715 1.758 -2.568 -2.180 -2.130 D 75 73 3 76 3 0 0 48 67 -6.174 -1.687 -0.566 IL 76 76 3 76 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 22 - U - - - ML 77 76 3 79 3 1 1 48 67 -8.061 -0.019 -6.715 -1.667 -1.632 -2.409 1.666 D 78 76 3 79 3 0 0 47 66 -6.174 -1.687 -0.566 IL 79 79 3 79 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 23 - U - - - ML 80 79 3 82 3 1 1 47 66 -8.061 -0.019 -6.715 -1.667 -1.632 -2.409 1.666 D 81 79 3 82 3 0 0 45 65 -6.174 -1.687 -0.566 IL 82 82 3 82 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 24 - U - - - ML 83 82 3 85 3 1 1 46 65 -3.208 -0.181 -6.715 -1.667 -1.632 -2.409 1.666 D 84 82 3 85 3 0 0 44 63 -6.174 -1.687 -0.566 IL 85 85 3 85 3 1 1 46 65 -1.774 -0.594 -4.475 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - A - - - ML 86 85 3 88 3 1 1 44 63 -8.061 -0.019 -6.715 1.758 -2.568 -2.180 -2.130 D 87 85 3 88 3 0 0 43 62 -6.174 -1.687 -0.566 IL 88 88 3 88 3 1 1 47 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - U - - - ML 89 88 3 91 3 1 1 43 62 -8.061 -0.019 -6.715 -1.667 -1.632 -2.409 1.666 D 90 88 3 91 3 0 0 42 61 -6.174 -1.687 -0.566 IL 91 91 3 91 3 1 1 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - A - - - ML 92 91 3 94 3 1 1 42 61 -8.061 -0.019 -6.715 1.758 -2.568 -2.180 -2.130 D 93 91 3 94 3 0 0 41 60 -6.174 -1.687 -0.566 IL 94 94 3 94 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - G - - - ML 95 94 3 97 3 1 1 41 60 -8.061 -0.019 -6.715 -0.723 -1.527 1.197 -0.408 D 96 94 3 97 3 0 0 40 59 -6.174 -1.687 -0.566 IL 97 97 3 97 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - a - - - ML 98 97 3 100 5 1 1 40 58 -7.178 -0.037 -6.994 -7.206 -8.097 0.708 -0.290 -1.039 0.087 D 99 97 3 100 5 0 0 38 57 -4.959 -0.803 -4.221 -2.596 -2.508 IL 100 100 3 100 5 1 1 40 59 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 31 55 g c - - MP 101 100 3 105 6 2 2 39 57 -9.148 -9.087 -0.021 -7.864 -8.144 -8.539 -3.471 -2.397 -3.564 1.729 -4.207 -4.619 0.150 -3.801 -3.465 2.280 -3.948 2.187 -0.111 -3.841 -1.770 -2.412 ML 102 100 3 105 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 103 100 3 105 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 104 100 3 105 6 0 0 35 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 105 105 5 105 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 106 106 6 106 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 32 54 A U - - MP 107 106 6 111 6 2 2 37 55 -9.148 -9.087 -0.021 -7.864 -8.144 -8.539 -3.969 -2.956 -3.974 3.436 -4.402 -5.482 -0.090 -4.004 -3.859 0.886 -4.415 -0.404 -0.507 -4.640 -2.030 -2.798 ML 108 106 6 111 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 109 106 6 111 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 110 106 6 111 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 111 111 5 111 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 112 112 6 112 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 33 53 G C - - MP 113 112 6 117 6 2 2 35 53 -9.148 -9.087 -0.021 -7.864 -8.144 -8.539 -4.935 -3.187 -5.055 0.070 -5.504 -4.768 -0.821 -5.309 -4.452 3.681 -4.775 -0.894 -1.201 -4.594 -2.869 -3.928 ML 114 112 6 117 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 115 112 6 117 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 116 112 6 117 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 117 117 5 117 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 118 118 6 118 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 34 52 G C - - MP 119 118 6 123 6 2 2 33 51 -9.148 -9.087 -0.021 -7.864 -8.144 -8.539 -4.935 -3.187 -5.055 0.070 -5.504 -4.768 -0.821 -5.309 -4.452 3.681 -4.775 -0.894 -1.201 -4.594 -2.869 -3.928 ML 120 118 6 123 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 121 118 6 123 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 122 118 6 123 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 123 123 5 123 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 124 124 6 124 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 35 51 U A - - MP 125 124 6 129 6 2 2 31 49 -9.148 -9.087 -0.021 -7.864 -8.144 -8.539 -4.421 -4.251 -4.233 -0.530 -3.127 -4.776 1.205 -3.839 -4.236 -0.308 -4.598 -2.143 3.428 -4.563 -0.798 -3.036 ML 126 124 6 129 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 127 124 6 129 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 128 124 6 129 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 129 129 5 129 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 130 130 6 130 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 36 50 U A - - MP 131 130 6 135 6 2 2 29 47 -9.148 -9.087 -0.021 -7.864 -8.144 -8.539 -4.421 -4.251 -4.233 -0.530 -3.127 -4.776 1.205 -3.839 -4.236 -0.308 -4.598 -2.143 3.428 -4.563 -0.798 -3.036 ML 132 130 6 135 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 133 130 6 135 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 134 130 6 135 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 135 135 5 135 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 136 136 6 136 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 37 49 U A - - MP 137 136 6 141 6 2 2 27 45 -9.148 -9.087 -0.021 -7.864 -8.144 -8.539 -4.421 -4.251 -4.233 -0.530 -3.127 -4.776 1.205 -3.839 -4.236 -0.308 -4.598 -2.143 3.428 -4.563 -0.798 -3.036 ML 138 136 6 141 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 139 136 6 141 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 140 136 6 141 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 141 141 5 141 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 142 142 6 142 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 38 48 G C - - MP 143 142 6 147 6 2 2 25 43 -9.148 -9.087 -0.021 -7.864 -8.144 -8.539 -4.935 -3.187 -5.055 0.070 -5.504 -4.768 -0.821 -5.309 -4.452 3.681 -4.775 -0.894 -1.201 -4.594 -2.869 -3.928 ML 144 142 6 147 6 1 1 24 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 145 142 6 147 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 146 142 6 147 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 147 147 5 147 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 148 148 6 148 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 39 47 G C - - MP 149 148 6 153 6 2 2 23 41 -9.148 -9.087 -0.021 -7.864 -8.144 -8.539 -4.935 -3.187 -5.055 0.070 -5.504 -4.768 -0.821 -5.309 -4.452 3.681 -4.775 -0.894 -1.201 -4.594 -2.869 -3.928 ML 150 148 6 153 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 151 148 6 153 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 152 148 6 153 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 153 153 5 153 6 1 1 23 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 154 154 6 154 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 40 46 c g - - MP 155 154 6 159 4 2 2 21 39 -7.052 -7.259 -0.049 -5.673 -3.596 -3.597 -3.500 0.048 -2.506 -4.082 2.216 -3.206 -3.524 0.246 -3.924 -1.682 1.800 -3.756 2.114 -2.432 ML 156 154 6 159 4 1 1 22 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 157 154 6 159 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 158 154 6 159 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 159 159 5 159 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 160 160 6 160 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - G - - - ML 161 160 6 163 3 1 1 17 36 -8.061 -0.019 -6.715 -0.679 -1.462 1.143 -0.314 D 162 160 6 163 3 0 0 17 36 -6.174 -1.687 -0.566 IL 163 163 3 163 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - g - - - ML 164 163 3 166 3 1 1 16 35 -8.061 -0.019 -6.715 0.554 -1.525 0.733 -0.937 D 165 163 3 166 3 0 0 16 34 -6.174 -1.687 -0.566 IL 166 166 3 166 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - U - - - ML 167 166 3 169 3 1 1 15 33 -8.061 -0.019 -6.715 -0.133 -0.954 -1.357 1.125 D 168 166 3 169 3 0 0 15 33 -6.174 -1.687 -0.566 IL 169 169 3 169 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - g - - - ML 170 169 3 172 3 1 1 13 31 -8.061 -0.019 -6.715 -0.406 0.010 0.591 -0.449 D 171 169 3 172 3 0 0 13 32 -6.174 -1.687 -0.566 IL 172 172 3 172 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - A - - - ML 173 172 3 175 2 1 1 1 1 * 0.000 1.182 -0.533 -1.253 -0.688 D 174 172 3 175 2 0 0 0 0 * 0.000 IL 175 175 3 175 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 46 ] - - - - - - E 176 175 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME cyano_het_sRNA ACC RF02596 DESC Cyanobacteria heterocyst sRNA LENG 56 MAXL 136 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sat Jul 13 06:17:05 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02596/CM NSEQ 5 EFFN 2.856445 CKSUM 584548828 STATS LOCAL MSV -8.1111 0.71930 STATS LOCAL VITERBI -8.3182 0.71930 STATS LOCAL FORWARD -4.1009 0.71930 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.46966 1.78347 1.26259 1.14249 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 0.00000 * 1 2.93682 3.84490 0.11338 3.41845 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 2 2.03263 3.14028 0.25413 2.99281 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 3 2.74105 3.47976 0.13702 3.41947 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 4 0.12049 3.47323 3.17496 3.20148 4 A - - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 5 3.25009 2.11226 3.02648 0.23347 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 6 2.73851 3.47645 0.13750 3.41493 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 7 3.14881 1.69456 2.96761 0.32574 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 8 2.83166 2.75845 3.35705 0.17096 8 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 9 2.93682 3.84490 0.11338 3.41845 9 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 10 2.83166 2.75845 3.35705 0.17096 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 11 2.83166 2.75845 3.35705 0.17096 11 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 12 0.12049 3.47323 3.17496 3.20148 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 13 2.83166 2.75845 3.35705 0.17096 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 14 2.26041 3.14588 0.22726 2.88331 14 G - - > 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 15 3.59211 0.16506 3.30913 2.42966 15 C - - > 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 16 0.26638 3.20553 1.94743 2.98231 16 A - - > 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 17 3.58988 0.16522 3.30809 2.42924 17 C - - > 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 18 3.17331 2.09992 2.92009 0.24623 18 U - - > 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 19 2.93682 3.84490 0.11338 3.41845 19 G - - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 20 2.93682 3.84490 0.11338 3.41845 20 G - - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 21 0.12049 3.47323 3.17496 3.20148 21 A - - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 22 2.83166 2.75845 3.35705 0.17096 22 U - - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 23 2.83166 2.75845 3.35705 0.17096 23 U - - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 24 2.83166 2.75845 3.35705 0.17096 24 U - - - 1.38629 1.38629 1.38629 1.38629 0.16552 2.00636 4.01367 0.24995 1.50888 1.09861 0.40547 25 0.12049 3.47323 3.17496 3.20148 26 A - - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 26 2.83166 2.75845 3.35705 0.17096 27 U - - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 27 0.12049 3.47323 3.17496 3.20148 28 A - - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 28 2.03811 2.60882 0.47724 1.73947 29 G - - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 29 0.86213 1.58407 2.18058 1.34852 30 a - - - 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 30 1.46167 2.74858 0.46470 2.57951 31 G - - < 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 31 0.25691 3.06759 2.04329 2.98717 32 A - - < 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 32 2.73810 3.47591 0.13757 3.41420 33 G - - < 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 33 2.73712 3.47464 0.13776 3.41245 34 G - - < 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 34 3.24378 2.11175 3.02344 0.23405 35 U - - < 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 35 3.24259 2.11166 3.02287 0.23416 36 U - - < 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 36 3.24162 2.11158 3.02239 0.23424 37 U - - < 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 37 2.73470 3.47148 0.13821 3.40814 38 G - - < 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 38 2.73433 3.47101 0.13828 3.40750 39 G - - < 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 39 2.67085 1.19619 2.45918 0.61072 40 U - - < 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 40 2.00002 2.55595 0.51457 1.66447 41 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 41 0.98333 2.59478 0.82113 2.19517 42 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 42 1.51741 2.15966 2.45228 0.54601 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 43 1.77554 1.34884 0.89707 1.81212 44 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 44 0.50841 1.76646 2.38728 1.99704 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 45 1.43173 2.62262 0.50822 2.44266 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 46 3.59434 0.16490 3.31017 2.43008 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 47 3.59537 0.16482 3.31064 2.43028 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 48 0.26565 3.21027 1.94811 2.98774 49 A - - > 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 49 0.26558 3.21069 1.94817 2.98823 50 A - - > 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 50 0.26552 3.21111 1.94823 2.98870 51 A - - > 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 51 3.59981 0.16450 3.31271 2.43111 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 52 3.59984 0.16450 3.31272 2.43112 53 C - - > 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 53 3.20445 2.36389 2.87362 0.21212 54 U - - > 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 54 2.79671 1.18390 2.54710 0.58951 55 U - - > 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 55 2.83166 2.75845 3.35705 0.17096 56 U - - : 1.38629 1.38629 1.38629 1.38629 0.03680 4.01367 4.01367 1.46634 0.26236 1.09861 0.40547 56 2.83166 2.75845 3.35705 0.17096 57 U - - : 1.38629 1.38629 1.38629 1.38629 0.01857 3.99544 * 1.46634 0.26236 0.00000 * //