# STOCKHOLM 1.0
#=GF ID Spy392987
#=GF AC RF02592
#=GF DE S. pyogenes antisense RNA 392987
#=GF AU Argasinska J; 0000-0003-2678-2824
#=GF GA 47.0
#=GF NC 45.3
#=GF TC 48.3
#=GF SE Argasinska J
#=GF SS Predicted; RNAalifold
#=GF TP Gene; antisense;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR SO; 0000370; small_regulatory_ncRNA;
#=GF DR SO; 0000644; antisense_RNA;
#=GF RN [1]
#=GF RM 26580233
#=GF RT RNA sequencing uncovers antisense RNAs and novel small RNAs in
#=GF RT Streptococcus pyogenes.
#=GF RA Le Rhun A, Beer YY, Reimegard J, Chylinski K, Charpentier E
#=GF RL RNA Biol. 2016;13:177-195.
#=GF WK Bacterial_small_RNA
#=GF SQ 3

CP000829.1/406997-407059   AUGGGAAUAAAUCUCUUUCUAGUGAAGUGUCGUAACUCUACUAUACAGGAUUUAUUCCUUUUU
AE004092.1/392987-393048   AUGGGAAUAAAUCUCUUUCUAGUA-AGUGUCGCAACUCUACUAUACAGGAUUUAUUCCUUUUU
AM295007.1/1451796-1451734 AUGGGAAUGAAUCUCUUUCUAGUGAAGUGUCGUAACUCUACUAUACAAGAUUUAUUCCUUUUU
#=GC SS_cons               ::<<<<<<<<<<<-<<---<<<<<-<<<______>>>->>>>>--->>>>>>>>>>>>>::::
#=GC RF                    AUgGGAAUaAAUCUcUUUCUAGUgAAGUGUCGuAACUCuACUAUACAgGAUUuAUUCCuUUUU
//
