INFERNAL1/a [1.1.5 | Sep 2023] NAME Spy779816 ACC RF02589 DESC S. pyogenes small RNA 779816 STATES 273 NODES 68 CLEN 88 W 105 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 4 14:47:12 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02589/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 1.316406 CKSUM 475283456 NULL 0.000 0.000 0.000 0.000 GA 67.00 TC 67.40 NC 66.80 EFP7GF -6.5870 0.71889 ECMLC 0.57193 -8.19220 1.91004 1600000 387657 0.003096 ECMGC 0.44014 -12.68513 -1.02852 1600000 67644 0.005913 ECMLI 0.52153 -5.71841 4.47451 1600000 244254 0.004913 ECMGI 0.46669 -7.83742 2.64537 1600000 53297 0.007505 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 105 125 -6.672 -6.879 -0.065 -5.293 IL 1 1 2 1 4 3 30 108 129 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 2 30 108 128 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 3 29 105 125 -7.710 -0.025 -6.364 -1.040 -2.166 1.560 -1.550 D 4 2 3 5 3 0 26 103 124 -6.174 -1.687 -0.566 IL 5 5 3 5 3 2 29 107 127 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 3 28 104 124 -7.710 -0.025 -6.364 -1.033 -1.113 -1.738 1.459 D 7 5 3 8 3 0 25 102 122 -6.174 -1.687 -0.566 IL 8 8 3 8 3 2 28 105 126 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 2 27 103 123 -7.710 -0.025 -6.364 1.583 -1.867 -1.550 -1.364 D 10 8 3 11 3 0 24 101 121 -6.174 -1.687 -0.566 IL 11 11 3 11 3 2 27 104 125 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 2 26 102 122 -8.118 -0.022 -6.436 1.583 -1.867 -1.550 -1.364 D 13 11 3 14 3 0 24 100 120 -5.620 -0.734 -1.403 IL 14 14 3 14 3 1 26 102 122 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 89 - U - - MR 15 14 3 17 3 2 25 101 121 -8.118 -0.022 -6.436 -1.033 -1.113 -1.738 1.459 D 16 14 3 17 3 0 22 99 119 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 25 101 121 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 88 - U - - MR 18 17 3 20 3 2 24 100 120 -8.118 -0.022 -6.436 -1.033 -1.113 -1.738 1.459 D 19 17 3 20 3 0 22 98 118 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 24 100 120 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 87 - U - - MR 21 20 3 23 3 1 23 99 119 -8.118 -0.022 -6.436 -1.033 -1.113 -1.738 1.459 D 22 20 3 23 3 0 21 97 117 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 24 99 119 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 86 - U - - MR 24 23 3 26 3 1 22 98 118 -8.118 -0.022 -6.436 -1.033 -1.113 -1.738 1.459 D 25 23 3 26 3 0 21 96 116 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 23 98 118 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 85 - U - - MR 27 26 3 29 2 1 21 97 117 -8.046 -0.005 -1.033 -1.113 -1.738 1.459 D 28 26 3 29 2 0 20 96 116 -4.432 -0.068 IR 29 29 3 29 2 1 22 97 118 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 10 ] - - - - - - B 30 29 3 31 108 0 20 96 116 [ BEGL 11 ] - - - - - - S 31 30 1 32 4 0 0 40 59 -0.049 -6.701 -6.108 -6.748 [ MATP 12 ] 5 30 A U - - MP 32 31 1 36 6 2 2 40 59 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -3.409 -2.545 -3.450 3.005 -3.601 -4.638 0.677 -3.513 -3.362 1.497 -3.890 -0.092 0.256 -3.887 -1.267 -2.311 ML 33 31 1 36 6 1 1 38 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 34 31 1 36 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 35 31 1 36 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 36 36 5 36 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 37 37 6 37 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 6 29 g u - - MP 38 37 6 42 6 2 2 38 57 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -3.135 -2.181 -3.258 1.956 -3.704 -4.406 0.546 -3.421 -3.118 1.847 -3.635 2.109 0.257 -3.613 -1.362 -2.105 ML 39 37 6 42 6 1 1 36 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 40 37 6 42 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 41 37 6 42 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 42 42 5 42 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 43 43 6 43 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 7 28 a u - - MP 44 43 6 48 6 2 2 36 55 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -2.733 0.262 -2.852 2.298 -3.068 -3.799 0.867 -3.109 -2.847 1.900 -3.362 0.072 0.605 -3.056 -0.921 -1.861 ML 45 43 6 48 6 1 1 34 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 46 43 6 48 6 1 1 34 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 47 43 6 48 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 48 48 5 48 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 49 49 6 49 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 8 27 g u - - MP 50 49 6 54 6 2 2 34 53 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -3.310 -2.214 -3.448 1.301 -3.912 -4.657 0.418 -3.518 -3.204 1.766 -3.712 2.665 0.056 -3.916 -1.520 -2.222 ML 51 49 6 54 6 1 1 32 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 52 49 6 54 6 1 1 32 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 53 49 6 54 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 54 54 5 54 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 55 55 6 55 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 9 26 A U - - MP 56 55 6 60 6 2 2 32 51 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -3.409 -2.545 -3.450 3.005 -3.601 -4.638 0.677 -3.513 -3.362 1.497 -3.890 -0.092 0.256 -3.887 -1.267 -2.311 ML 57 55 6 60 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 58 55 6 60 6 1 1 30 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 59 55 6 60 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 60 60 5 60 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 61 61 6 61 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 10 25 C G - - MP 62 61 6 66 6 2 2 30 49 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -4.054 -3.908 -3.823 -0.193 -2.661 -4.298 3.361 -3.419 -3.860 0.135 -4.169 -1.851 0.897 -4.152 -0.360 -2.718 ML 63 61 6 66 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 64 61 6 66 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 65 61 6 66 6 0 0 26 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 66 66 5 66 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 67 67 6 67 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 11 24 C G - - MP 68 67 6 72 6 2 2 28 47 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -4.054 -3.908 -3.823 -0.193 -2.661 -4.298 3.361 -3.419 -3.860 0.135 -4.169 -1.851 0.897 -4.152 -0.360 -2.718 ML 69 67 6 72 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 70 67 6 72 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 71 67 6 72 6 0 0 25 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 72 72 5 72 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 73 73 6 73 5 1 1 27 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 12 23 U A - - MP 74 73 6 78 4 2 2 26 45 -6.672 -6.879 -0.065 -5.293 -3.705 -3.506 -3.593 0.160 -2.647 -4.199 1.667 -3.305 -3.604 0.504 -4.000 -1.418 3.030 -3.871 -0.336 -2.471 ML 75 73 6 78 4 1 1 26 46 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 76 73 6 78 4 1 1 26 45 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 77 73 6 78 4 0 0 25 44 -4.568 -4.250 -2.265 -0.520 IL 78 78 5 78 4 1 1 28 47 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 79 79 6 79 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 13 - A - - - ML 80 79 6 82 3 1 1 23 42 -7.710 -0.025 -6.364 1.583 -1.867 -1.550 -1.364 D 81 79 6 82 3 0 0 22 41 -6.174 -1.687 -0.566 IL 82 82 3 82 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 14 - C - - - ML 83 82 3 85 5 1 1 22 41 -2.506 -0.522 -6.690 -3.142 -7.793 -1.147 1.415 -1.943 -0.685 D 84 82 3 85 5 0 0 21 39 -4.959 -0.803 -4.221 -2.596 -2.508 IL 85 85 3 85 5 1 1 22 41 -2.898 -0.335 -4.577 -6.409 -5.682 0.000 0.000 0.000 0.000 [ MATP 22 ] 16 22 g c - - MP 86 85 3 90 6 2 2 21 39 -8.941 -8.880 -0.024 -7.657 -7.937 -8.332 -2.729 -2.227 -2.820 1.123 -2.871 -3.508 1.104 -3.124 -2.890 2.701 -3.355 -0.201 0.804 -0.741 -0.710 -1.903 ML 87 85 3 90 6 1 1 20 39 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 88 85 3 90 6 1 1 20 38 -7.563 -6.292 -2.201 -6.271 -0.501 -4.484 -0.243 -0.530 -0.869 0.937 D 89 85 3 90 6 0 0 18 37 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 90 90 5 90 6 1 1 21 39 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 91 91 6 91 5 1 1 20 39 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 17 21 c g - - MP 92 91 6 96 4 2 2 19 37 -6.463 -6.670 -0.075 -5.084 -3.283 -3.185 -3.182 0.436 -2.225 -3.753 2.709 -2.910 -3.214 0.783 -3.602 -1.225 1.397 -3.423 1.050 -2.114 ML 93 91 6 96 4 1 1 20 38 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 94 91 6 96 4 1 1 19 37 -5.456 -4.485 -0.844 -1.413 1.100 -0.976 -0.722 -0.432 D 95 91 6 96 4 0 0 18 37 -4.568 -4.250 -2.265 -0.520 IL 96 96 5 96 4 1 1 21 40 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 97 97 6 97 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 18 - A - - - ML 98 97 6 100 3 1 1 15 33 -7.710 -0.025 -6.364 1.053 -1.229 -0.203 -0.665 D 99 97 6 100 3 0 0 15 33 -6.174 -1.687 -0.566 IL 100 100 3 100 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 19 - A - - - ML 101 100 3 103 3 1 1 13 32 -7.710 -0.025 -6.364 1.583 -1.867 -1.550 -1.364 D 102 100 3 103 3 0 0 13 32 -6.174 -1.687 -0.566 IL 103 103 3 103 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 20 - A - - - ML 104 103 3 106 2 1 1 1 1 * 0.000 1.583 -1.867 -1.550 -1.364 D 105 103 3 106 2 0 0 0 0 * 0.000 IL 106 106 3 106 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 27 ] - - - - - - E 107 106 3 -1 0 0 0 0 0 [ BEGR 28 ] - - - - - - S 108 30 1 109 3 0 4 69 89 -7.710 -0.025 -6.364 IL 109 109 2 109 3 1 3 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 31 - a - - - ML 110 109 2 112 3 1 4 69 89 -7.710 -0.025 -6.364 0.878 -0.869 -0.944 0.131 D 111 109 2 112 3 0 0 68 87 -6.174 -1.687 -0.566 IL 112 112 3 112 3 1 3 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 32 - c - - - ML 113 112 3 115 3 1 4 68 88 -7.710 -0.025 -6.364 0.185 0.582 -1.071 -0.167 D 114 112 3 115 3 0 0 67 86 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 2 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 33 - u - - - ML 116 115 3 118 3 1 3 67 87 -7.710 -0.025 -6.364 -0.551 -0.040 -1.285 0.952 D 117 115 3 118 3 0 0 66 85 -6.174 -1.687 -0.566 IL 118 118 3 118 3 1 2 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 34 - a - - - ML 119 118 3 121 3 1 3 66 85 -7.710 -0.025 -6.364 0.878 -0.869 -0.944 0.131 D 120 118 3 121 3 0 0 65 84 -6.174 -1.687 -0.566 IL 121 121 3 121 3 1 1 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 35 - u - - - ML 122 121 3 124 3 1 2 65 84 -7.710 -0.025 -6.364 0.137 -0.713 -1.018 0.846 D 123 121 3 124 3 0 0 64 83 -6.174 -1.687 -0.566 IL 124 124 3 124 3 1 1 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 36 - a - - - ML 125 124 3 127 3 1 2 64 83 -7.710 -0.025 -6.364 0.878 -0.869 -0.944 0.131 D 126 124 3 127 3 0 0 63 82 -6.174 -1.687 -0.566 IL 127 127 3 127 3 1 1 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 37 - C - - - ML 128 127 3 130 3 1 2 63 82 -7.710 -0.025 -6.364 -1.147 1.415 -1.943 -0.685 D 129 127 3 130 3 0 0 61 81 -6.174 -1.687 -0.566 IL 130 130 3 130 3 1 1 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 38 - u - - - ML 131 130 3 133 3 1 1 62 81 -7.710 -0.025 -6.364 -0.551 -0.040 -1.285 0.952 D 132 130 3 133 3 0 0 60 80 -6.174 -1.687 -0.566 IL 133 133 3 133 3 1 1 64 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 39 - a - - - ML 134 133 3 136 3 1 1 61 80 -7.710 -0.025 -6.364 0.878 -0.869 -0.944 0.131 D 135 133 3 136 3 0 0 59 79 -6.174 -1.687 -0.566 IL 136 136 3 136 3 1 1 63 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 40 - g - - - ML 137 136 3 139 3 1 1 60 79 -7.710 -0.025 -6.364 -0.311 -1.005 0.728 0.056 D 138 136 3 139 3 0 0 58 78 -6.174 -1.687 -0.566 IL 139 139 3 139 3 1 1 62 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 41 - a - - - ML 140 139 3 142 3 1 1 58 77 -7.710 -0.025 -6.364 0.878 -0.869 -0.944 0.131 D 141 139 3 142 3 0 0 57 76 -6.174 -1.687 -0.566 IL 142 142 3 142 3 1 1 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 42 - u - - - ML 143 142 3 145 3 1 1 57 76 -7.710 -0.025 -6.364 -0.551 -0.040 -1.285 0.952 D 144 142 3 145 3 0 0 56 75 -6.174 -1.687 -0.566 IL 145 145 3 145 3 1 1 60 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 43 - U - - - ML 146 145 3 148 3 1 1 56 75 -7.710 -0.025 -6.364 -1.033 -1.113 -1.738 1.459 D 147 145 3 148 3 0 0 55 74 -6.174 -1.687 -0.566 IL 148 148 3 148 3 1 1 59 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 44 - u - - - ML 149 148 3 151 5 1 1 55 74 -6.874 -0.046 -6.690 -6.902 -7.793 -0.199 -0.249 -0.292 0.556 D 150 148 3 151 5 0 0 54 73 -4.959 -0.803 -4.221 -2.596 -2.508 IL 151 151 3 151 5 1 1 55 74 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 45 84 g c - - MP 152 151 3 156 6 2 2 54 73 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -3.248 -2.323 -3.298 1.688 -3.659 -4.139 0.668 -3.581 -3.307 2.738 -3.770 0.761 0.374 -3.417 -1.266 -2.226 ML 153 151 3 156 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 154 151 3 156 6 1 1 52 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 155 151 3 156 6 0 0 50 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 156 156 5 156 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 157 157 6 157 5 1 1 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 46 83 c g - - MP 158 157 6 162 6 2 2 52 71 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -3.501 -3.393 -3.377 0.305 -2.356 -3.943 2.812 -3.056 -3.400 0.630 -3.783 -1.376 1.895 -3.633 -0.039 -2.275 ML 159 157 6 162 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 160 157 6 162 6 1 1 50 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 161 157 6 162 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 162 162 5 162 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 163 163 6 163 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 47 82 C G - - MP 164 163 6 168 6 2 2 50 69 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -4.054 -3.908 -3.823 -0.193 -2.661 -4.298 3.361 -3.419 -3.860 0.135 -4.169 -1.851 0.897 -4.152 -0.360 -2.718 ML 165 163 6 168 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 166 163 6 168 6 1 1 48 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 167 163 6 168 6 0 0 46 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 168 168 5 168 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 169 169 6 169 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 48 81 c g - - MP 170 169 6 174 6 2 2 48 67 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -3.435 -3.396 -3.306 0.216 -2.291 -3.849 2.409 -3.000 -3.343 0.493 -3.717 -1.480 1.274 -3.571 2.066 -2.247 ML 171 169 6 174 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 172 169 6 174 6 1 1 46 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 173 169 6 174 6 0 0 44 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 174 174 5 174 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 175 175 6 175 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 49 80 C G - - MP 176 175 6 180 6 2 2 46 65 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -3.345 -3.374 -3.306 0.164 0.024 -3.934 3.050 -3.123 -3.343 0.341 -3.762 -1.536 1.121 -3.542 -0.222 -2.296 ML 177 175 6 180 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 178 175 6 180 6 1 1 44 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 179 175 6 180 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 180 180 5 180 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 181 181 6 181 5 1 1 45 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 50 79 a u - - MP 182 181 6 186 6 2 2 44 63 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -3.122 -2.278 -3.217 2.606 -3.571 -4.370 0.643 -3.397 -3.140 1.802 -3.675 1.001 0.353 -3.552 -1.260 -2.104 ML 183 181 6 186 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 184 181 6 186 6 1 1 42 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 185 181 6 186 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 186 186 5 186 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 187 187 6 187 5 1 1 43 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 51 78 c g - - MP 188 187 6 192 6 2 2 42 61 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -3.459 -3.397 -3.339 0.258 -2.320 -3.895 2.831 -3.025 -3.365 0.540 -3.747 -1.439 1.302 -3.596 1.178 -2.258 ML 189 187 6 192 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 190 187 6 192 6 1 1 40 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 191 187 6 192 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 192 192 5 192 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 193 193 6 193 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 52 77 G C - - MP 194 193 6 198 6 2 2 40 59 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -4.250 -2.863 -4.317 0.516 -4.540 -4.491 -0.023 -4.515 -3.988 3.494 -4.363 -0.550 -0.424 -4.141 -2.036 -3.202 ML 195 193 6 198 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 196 193 6 198 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 197 193 6 198 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 198 198 5 198 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 199 199 6 199 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 53 76 C G - - MP 200 199 6 204 6 2 2 38 57 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -4.054 -3.908 -3.823 -0.193 -2.661 -4.298 3.361 -3.419 -3.860 0.135 -4.169 -1.851 0.897 -4.152 -0.360 -2.718 ML 201 199 6 204 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 202 199 6 204 6 1 1 37 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 203 199 6 204 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 204 204 5 204 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 205 205 6 205 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 54 75 U A - - MP 206 205 6 210 6 2 2 36 55 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -3.705 -3.506 -3.593 0.160 -2.647 -4.199 1.667 -3.305 -3.604 0.504 -4.000 -1.418 3.030 -3.871 -0.336 -2.471 ML 207 205 6 210 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 208 205 6 210 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 209 205 6 210 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 210 210 5 210 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 211 211 6 211 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 53 ] 55 74 C G - - MP 212 211 6 216 4 2 2 34 53 -6.613 -7.858 -0.265 -2.706 -4.054 -3.908 -3.823 -0.193 -2.661 -4.298 3.361 -3.419 -3.860 0.135 -4.169 -1.851 0.897 -4.152 -0.360 -2.718 ML 213 211 6 216 4 1 1 34 52 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 214 211 6 216 4 1 1 33 52 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 215 211 6 216 4 0 0 31 50 -12.737 -14.007 -2.036 -0.404 IL 216 216 5 216 4 1 1 34 52 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 217 217 6 217 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 54 ] - 73 - A - - MR 218 217 6 220 3 1 1 32 51 -7.973 -0.024 -6.290 1.467 -1.568 -1.279 -1.042 D 219 217 6 220 3 0 0 30 49 -7.139 -2.316 -0.336 IR 220 220 3 220 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 55 ] - 72 - G - - MR 221 220 3 223 5 1 1 31 50 -6.740 -0.050 -6.555 -6.768 -7.659 -0.718 -1.778 1.408 -1.165 D 222 220 3 223 5 0 0 30 49 -5.818 -0.475 -3.444 -4.875 -2.870 IR 223 223 3 223 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 56 71 a u - - MP 224 223 3 228 6 2 2 30 49 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -3.110 -2.266 -3.206 2.563 -3.563 -4.354 0.648 -3.390 -3.130 1.816 -3.664 1.088 0.359 -3.537 -1.253 -2.094 ML 225 223 3 228 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 226 223 3 228 6 1 1 29 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 227 223 3 228 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 228 228 5 228 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 229 229 6 229 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 57 ] 57 70 g u - - MP 230 229 6 234 6 2 2 28 47 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -2.491 -1.881 -2.701 1.214 -2.702 -3.414 1.217 -0.149 -2.578 1.578 -3.013 1.751 0.886 -2.841 -0.587 -1.699 ML 231 229 6 234 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 232 229 6 234 6 1 1 27 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 233 229 6 234 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 234 234 5 234 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 235 235 6 235 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 58 ] 58 69 A U - - MP 236 235 6 240 6 2 2 26 45 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -3.409 -2.545 -3.450 3.005 -3.601 -4.638 0.677 -3.513 -3.362 1.497 -3.890 -0.092 0.256 -3.887 -1.267 -2.311 ML 237 235 6 240 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 238 235 6 240 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 239 235 6 240 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 240 240 5 240 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 241 241 6 241 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 59 ] 59 68 g c - - MP 242 241 6 246 6 2 2 24 43 -9.008 -8.948 -0.023 -7.724 -8.004 -8.399 -2.711 -2.438 -2.784 1.010 -0.435 -3.546 1.583 -2.928 -2.855 2.351 -3.344 -0.457 1.180 -2.897 -0.318 -1.830 ML 243 241 6 246 6 1 1 24 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 244 241 6 246 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 245 241 6 246 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 246 246 5 246 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 247 247 6 247 5 1 1 24 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 60 ] 60 67 u a - - MP 248 247 6 252 4 2 2 22 41 -6.672 -6.879 -0.065 -5.293 -2.877 -2.914 -2.913 0.546 0.016 -3.622 1.898 -2.837 -2.943 0.715 -3.419 -1.119 2.460 -3.111 -0.041 -1.932 ML 249 247 6 252 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 250 247 6 252 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 251 247 6 252 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 252 252 5 252 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 253 253 6 253 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 61 - c - - - ML 254 253 6 256 3 1 1 19 38 -7.710 -0.025 -6.364 -0.328 0.654 -0.430 -0.172 D 255 253 6 256 3 0 0 18 37 -6.174 -1.687 -0.566 IL 256 256 3 256 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 62 - g - - - ML 257 256 3 259 3 1 1 18 36 -7.710 -0.025 -6.364 0.143 -1.373 0.943 -0.767 D 258 256 3 259 3 0 0 17 36 -6.174 -1.687 -0.566 IL 259 259 3 259 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 63 - C - - - ML 260 259 3 262 3 1 1 16 35 -7.710 -0.025 -6.364 -1.147 1.415 -1.943 -0.685 D 261 259 3 262 3 0 0 16 34 -6.174 -1.687 -0.566 IL 262 262 3 262 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 64 - C - - - ML 263 262 3 265 3 1 1 15 33 -7.710 -0.025 -6.364 -1.147 1.415 -1.943 -0.685 D 264 262 3 265 3 0 0 15 33 -6.174 -1.687 -0.566 IL 265 265 3 265 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 65 - A - - - ML 266 265 3 268 3 1 1 13 32 -7.710 -0.025 -6.364 1.583 -1.867 -1.550 -1.364 D 267 265 3 268 3 0 0 13 32 -6.174 -1.687 -0.566 IL 268 268 3 268 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 66 - A - - - ML 269 268 3 271 2 1 1 1 1 * 0.000 1.583 -1.867 -1.550 -1.364 D 270 268 3 271 2 0 0 0 0 * 0.000 IL 271 271 3 271 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 67 ] - - - - - - E 272 271 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME Spy779816 ACC RF02589 DESC S. pyogenes small RNA 779816 LENG 88 MAXL 181 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 4 14:47:12 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02589/CM NSEQ 4 EFFN 2.183594 CKSUM 475283456 STATS LOCAL MSV -8.9946 0.71889 STATS LOCAL VITERBI -9.8896 0.71889 STATS LOCAL FORWARD -3.2580 0.71889 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.36397 1.47436 1.43285 1.28445 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 0.00000 * 1 2.62004 3.48660 0.16275 3.06208 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 2 2.53754 2.51390 3.05187 0.23229 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 3 0.16858 3.16173 2.89346 2.85765 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 4 0.16858 3.16173 2.89346 2.85765 4 A - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 5 0.37443 2.68233 1.76572 2.61936 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 6 1.22278 2.69290 0.58390 2.52343 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 7 0.64177 2.32563 1.34394 2.16193 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 8 1.88533 2.82015 0.32680 2.69714 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 9 0.37544 2.67889 1.76518 2.61428 9 A - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 10 3.11631 0.26043 2.88190 2.04846 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 11 3.11535 0.26055 2.88146 2.04829 11 C - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 12 2.88187 1.83980 2.62364 0.33886 12 U - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 13 0.16858 3.16173 2.89346 2.85765 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 14 2.75225 0.22136 3.32713 2.31369 14 C - - - 1.38629 1.38629 1.38629 1.38629 0.59902 1.30134 1.72326 0.15095 1.96536 1.09861 0.40547 15 1.85394 2.05976 0.64041 1.66696 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.05229 3.67016 3.67016 1.46634 0.26236 2.33331 0.10200 16 2.39559 0.75721 2.14546 1.13042 17 c - - < 1.38629 1.38629 1.38629 1.38629 0.05229 3.67016 3.67016 1.46634 0.26236 0.21561 1.64016 17 0.56258 2.45373 1.51897 2.07663 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 18 0.16858 3.16173 2.89346 2.85765 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 19 0.16858 3.16173 2.89346 2.85765 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 20 1.48591 2.31362 0.58294 2.14945 21 G - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 21 2.11267 0.73322 1.92387 1.37562 22 c - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 22 0.38471 2.80588 1.67669 2.63238 23 A - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 23 2.32417 3.04828 0.22539 2.87366 24 G - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 24 2.32436 3.04853 0.22533 2.87397 25 G - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 25 2.84051 2.05011 2.49090 0.31464 26 U - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 26 2.90685 1.84306 2.61909 0.33666 27 U - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 27 2.38220 1.15618 2.12609 0.74726 28 u - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 28 2.72897 1.69315 2.48819 0.40389 29 U - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 29 2.83021 2.04900 2.48715 0.31610 30 U - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 30 0.69991 2.11306 2.18302 1.31006 31 a - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 31 1.28597 0.83888 2.32560 1.64147 32 c - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 32 1.97185 1.39412 2.49909 0.63376 33 U - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 33 0.69991 2.11306 2.18302 1.31006 34 a - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 34 1.32044 2.01376 2.24886 0.70527 35 u - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 35 0.69991 2.11306 2.18302 1.31006 36 a - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 36 2.75225 0.22136 3.32713 2.31369 37 C - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 37 1.97185 1.39412 2.49909 0.63376 38 U - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 38 0.69991 2.11306 2.18302 1.31006 39 a - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 39 1.76680 2.26269 0.74055 1.39353 40 g - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 40 0.69991 2.11306 2.18302 1.31006 41 a - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 41 1.97185 1.39412 2.49909 0.63376 42 U - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 42 2.53754 2.51390 3.05187 0.23229 43 U - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 43 1.61448 1.55426 1.56135 0.96809 44 u - - - 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 44 1.43308 2.40476 0.56636 2.26766 45 G - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 45 2.54930 0.68313 2.28997 1.15341 46 C - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 46 3.11903 0.26011 2.88316 2.04892 47 C - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 47 2.72486 1.02504 2.50338 0.70551 48 u - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 48 2.66157 0.40398 2.47123 1.72582 49 C - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 49 0.69078 2.57558 1.09892 2.41382 50 A - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 50 2.61948 0.65735 2.38740 1.14864 51 C - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 51 2.53408 3.15852 0.18265 3.09849 52 G - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 52 3.11376 0.26074 2.88072 2.04802 53 C - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 53 2.88089 1.83976 2.62322 0.33899 54 U - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 54 3.11290 0.26084 2.88032 2.04788 55 C - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 55 0.72717 2.55233 1.05922 2.38488 56 a - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 56 1.82273 1.56129 0.69698 2.03666 57 g - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 57 0.37739 2.67235 1.76416 2.60463 58 A - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 58 1.94436 1.46969 0.80390 1.71845 59 g - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 59 2.34239 1.15830 2.16036 0.74529 60 u - - < 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 60 1.80868 0.76283 1.71069 1.66578 61 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 61 1.33901 2.59336 0.59646 2.18595 62 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 62 2.75225 0.22136 3.32713 2.31369 63 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 63 2.75225 0.22136 3.32713 2.31369 64 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 64 0.16858 3.16173 2.89346 2.85765 65 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 65 0.16858 3.16173 2.89346 2.85765 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 66 0.67539 2.32710 1.29159 2.13173 67 A - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 67 1.62501 0.88093 1.57065 1.71045 68 c - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 68 2.83421 2.04943 2.48861 0.31553 69 U - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 69 2.25877 1.74704 1.93205 0.55099 70 U - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 70 2.61705 1.66097 2.36800 0.44105 71 U - - > 1.38629 1.38629 1.38629 1.38629 0.19325 3.84096 1.86918 1.46634 0.26236 1.09861 0.40547 71 2.30849 3.12574 0.23641 2.69968 72 G - - - 1.38629 1.38629 1.38629 1.38629 0.05079 3.69850 3.69850 1.46634 0.26236 2.21740 0.11529 72 0.23353 2.86753 2.62878 2.53499 73 A - - - 1.38629 1.38629 1.38629 1.38629 0.05079 3.69850 3.69850 1.46634 0.26236 0.24562 1.52426 73 2.32336 3.04721 0.22565 2.87234 74 G - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 74 0.38481 2.80546 1.67666 2.63186 75 A - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 75 2.32371 3.04766 0.22554 2.87290 76 G - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 76 3.30266 0.21565 2.99162 2.23499 77 C - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 77 1.88873 2.54981 0.38785 2.38458 78 G - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 78 2.63103 1.67369 2.37787 0.43434 79 U - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 79 1.50729 2.63460 0.47873 2.43983 80 G - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 80 1.94573 2.66128 0.35070 2.48814 81 G - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 81 2.32446 3.04866 0.22530 2.87412 82 G - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 82 1.31415 2.45365 0.60519 2.30915 83 G - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 83 2.50005 0.78120 2.21301 1.04785 84 c - - > 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 84 2.53754 2.51390 3.05187 0.23229 85 U - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 85 2.53754 2.51390 3.05187 0.23229 86 U - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 86 2.53754 2.51390 3.05187 0.23229 87 U - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 87 2.53754 2.51390 3.05187 0.23229 88 U - - : 1.38629 1.38629 1.38629 1.38629 0.04390 3.84096 3.84096 1.46634 0.26236 1.09861 0.40547 88 2.53754 2.51390 3.05187 0.23229 89 U - - : 1.38629 1.38629 1.38629 1.38629 0.02219 3.81926 * 1.46634 0.26236 0.00000 * //