INFERNAL1/a [1.1.5 | Sep 2023] NAME KRAS_3UTR ACC RF02584 DESC KRAS 3' UTR cis-regulatory element STATES 151 NODES 41 CLEN 49 W 64 ALPH RNA RF no CONS yes MAP yes DATE Mon Jul 8 02:30:13 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02584/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 2.000000 CKSUM 3359945993 NULL 0.000 0.000 0.000 0.000 GA 49.00 TC 49.00 NC 47.90 EFP7GF -6.1359 0.73334 ECMLC 0.44362 -9.21298 5.67924 1600000 887867 0.001352 ECMGC 0.38049 -14.16854 4.41158 1600000 470250 0.000851 ECMLI 0.43949 -6.61279 6.99891 1600000 475559 0.002523 ECMGI 0.38333 -11.03044 6.53749 1600000 336331 0.001189 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 64 84 -6.977 -7.184 -0.052 -5.598 IL 1 1 2 1 4 1 5 68 88 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 4 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 5 64 84 -7.991 -0.020 -6.645 -1.806 1.641 -2.632 -1.207 D 4 2 3 5 3 0 0 63 83 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 4 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - C - - - ML 6 5 3 8 3 1 5 63 83 -7.991 -0.020 -6.645 -1.806 1.641 -2.632 -1.207 D 7 5 3 8 3 0 0 62 82 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 3 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 1 4 62 82 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 10 8 3 11 3 0 0 61 80 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 2 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 4 61 81 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 13 11 3 14 3 0 0 60 79 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 2 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 3 60 79 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 16 14 3 17 3 0 0 59 78 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 2 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 1 3 59 78 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 19 17 3 20 3 0 0 58 77 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 1 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 2 58 77 -7.991 -0.020 -6.645 -1.535 -1.523 -2.271 1.632 D 22 20 3 23 3 0 0 57 76 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 1 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 2 57 76 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 25 23 3 26 3 0 0 56 75 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 1 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 27 26 3 29 3 1 2 56 75 -7.991 -0.020 -6.645 -1.535 -1.523 -2.271 1.632 D 28 26 3 29 3 0 0 54 74 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 1 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 30 29 3 32 3 1 1 55 74 -7.991 -0.020 -6.645 -1.535 -1.523 -2.271 1.632 D 31 29 3 32 3 0 0 53 73 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 1 57 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 1 54 73 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 34 32 3 35 3 0 0 52 72 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 1 56 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - U - - - ML 36 35 3 38 3 1 1 53 72 -7.991 -0.020 -6.645 -1.535 -1.523 -2.271 1.632 D 37 35 3 38 3 0 0 51 71 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 1 55 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - A - - - ML 39 38 3 41 3 1 1 51 71 -8.380 -0.018 -6.697 1.730 -2.426 -2.052 -1.973 D 40 38 3 41 3 0 0 50 69 -5.620 -0.734 -1.403 IL 41 41 3 41 3 1 1 52 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 49 - A - - MR 42 41 3 44 3 1 1 50 70 -8.380 -0.018 -6.697 1.730 -2.426 -2.052 -1.973 D 43 41 3 44 3 0 0 49 68 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 1 51 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 48 - U - - MR 45 44 3 47 3 1 1 49 69 -8.380 -0.018 -6.697 -1.535 -1.523 -2.271 1.632 D 46 44 3 47 3 0 0 48 67 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 1 50 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 47 - U - - MR 48 47 3 50 3 1 1 48 68 -8.380 -0.018 -6.697 -1.535 -1.523 -2.271 1.632 D 49 47 3 50 3 0 0 47 66 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 1 49 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 46 - A - - MR 51 50 3 53 5 1 1 47 67 -7.117 -0.038 -6.932 -7.144 -8.036 1.730 -2.426 -2.052 -1.973 D 52 50 3 53 5 0 0 46 65 -5.352 -0.707 -2.978 -4.409 -2.404 IR 53 53 3 53 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 14 45 U A - - MP 54 53 3 58 6 2 2 46 66 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.256 -4.083 -4.087 -0.373 -3.015 -4.645 1.315 -3.716 -4.092 -0.129 -4.462 -1.980 3.359 -4.405 -0.690 -2.909 ML 55 53 3 58 6 1 1 45 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 56 53 3 58 6 1 1 45 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 57 53 3 58 6 0 0 42 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 58 58 5 58 6 1 1 46 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 59 59 6 59 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 15 44 U A - - MP 60 59 6 64 6 2 2 44 64 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.256 -4.083 -4.087 -0.373 -3.015 -4.645 1.315 -3.716 -4.092 -0.129 -4.462 -1.980 3.359 -4.405 -0.690 -2.909 ML 61 59 6 64 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 62 59 6 64 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 63 59 6 64 6 0 0 40 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 64 64 5 64 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 65 65 6 65 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 16 43 U A - - MP 66 65 6 70 6 2 2 42 62 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.256 -4.083 -4.087 -0.373 -3.015 -4.645 1.315 -3.716 -4.092 -0.129 -4.462 -1.980 3.359 -4.405 -0.690 -2.909 ML 67 65 6 70 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 6 70 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 6 70 6 0 0 38 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 17 42 U A - - MP 72 71 6 76 6 2 2 40 60 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.256 -4.083 -4.087 -0.373 -3.015 -4.645 1.315 -3.716 -4.092 -0.129 -4.462 -1.980 3.359 -4.405 -0.690 -2.909 ML 73 71 6 76 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 75 71 6 76 6 0 0 36 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 76 76 5 76 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 77 77 6 77 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 18 41 U A - - MP 78 77 6 82 6 2 2 38 58 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.256 -4.083 -4.087 -0.373 -3.015 -4.645 1.315 -3.716 -4.092 -0.129 -4.462 -1.980 3.359 -4.405 -0.690 -2.909 ML 79 77 6 82 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 80 77 6 82 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 81 77 6 82 6 0 0 34 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 82 82 5 82 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 83 83 6 83 5 1 1 38 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 19 40 U A - - MP 84 83 6 88 6 2 2 36 56 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.256 -4.083 -4.087 -0.373 -3.015 -4.645 1.315 -3.716 -4.092 -0.129 -4.462 -1.980 3.359 -4.405 -0.690 -2.909 ML 85 83 6 88 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 6 88 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 6 88 6 0 0 32 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 1 36 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 20 39 C G - - MP 90 89 6 94 6 2 2 34 54 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -4.612 -4.524 -4.292 -0.750 -2.996 -4.695 3.570 -3.812 -4.343 -0.519 -4.597 -2.472 0.512 -4.677 -0.704 -3.181 ML 91 89 6 94 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 21 38 u g - - MP 96 95 6 100 6 2 2 32 52 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -2.827 -2.832 -2.880 0.495 -2.336 -3.599 1.671 -2.882 -2.922 0.679 -3.399 -1.075 1.121 -3.081 1.720 1.423 ML 97 95 6 100 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 22 37 A U - - MP 102 101 6 106 6 2 2 30 50 -9.118 -9.058 -0.021 -7.834 -8.114 -8.509 -3.842 -2.861 -3.857 3.364 -4.221 -5.288 0.082 -3.896 -3.747 1.023 -4.297 -0.328 -0.335 -4.467 -1.858 -2.688 ML 103 101 6 106 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 23 36 U A - - MP 108 107 6 112 4 2 2 28 47 -6.977 -7.184 -0.052 -5.598 -4.256 -4.083 -4.087 -0.373 -3.015 -4.645 1.315 -3.716 -4.092 -0.129 -4.462 -1.980 3.359 -4.405 -0.690 -2.909 ML 109 107 6 112 4 1 1 29 48 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 4 1 1 29 48 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 111 107 6 112 4 0 0 28 47 -4.568 -4.250 -2.265 -0.520 IL 112 112 5 112 4 1 1 30 50 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 113 113 6 113 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 24 - A - - - ML 114 113 6 116 3 1 1 26 45 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 115 113 6 116 3 0 0 25 44 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 25 - A - - - ML 117 116 3 119 3 1 1 25 43 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 118 116 3 119 3 0 0 24 43 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 26 - A - - - ML 120 119 3 122 3 1 1 23 42 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 121 119 3 122 3 0 0 22 41 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 27 - A - - - ML 123 122 3 125 3 1 1 22 41 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 124 122 3 125 3 0 0 21 40 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 28 - A - - - ML 126 125 3 128 3 1 1 21 40 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 127 125 3 128 3 0 0 20 39 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 29 - G - - - ML 129 128 3 131 3 1 1 20 39 -7.991 -0.020 -6.645 -1.638 -2.867 1.736 -2.254 D 130 128 3 131 3 0 0 19 38 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 30 - A - - - ML 132 131 3 134 3 1 1 19 37 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 133 131 3 134 3 0 0 18 37 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 31 - A - - - ML 135 134 3 137 3 1 1 18 36 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 136 134 3 137 3 0 0 17 36 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 32 - A - - - ML 138 137 3 140 3 1 1 16 35 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 139 137 3 140 3 0 0 16 34 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 33 - A - - - ML 141 140 3 143 3 1 1 15 33 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 142 140 3 143 3 0 0 15 33 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 34 - A - - - ML 144 143 3 146 3 1 1 13 31 -7.991 -0.020 -6.645 1.730 -2.426 -2.052 -1.973 D 145 143 3 146 3 0 0 13 32 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 35 - A - - - ML 147 146 3 149 2 1 1 1 1 * 0.000 1.730 -2.426 -2.052 -1.973 D 148 146 3 149 2 0 0 0 0 * 0.000 IL 149 149 3 149 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 40 ] - - - - - - E 150 149 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME KRAS_3UTR ACC RF02584 DESC KRAS 3' UTR cis-regulatory element LENG 49 MAXL 132 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Mon Jul 8 02:30:13 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02584/CM NSEQ 2 EFFN 1.683594 CKSUM 3359945993 STATS LOCAL MSV -8.1495 0.73334 STATS LOCAL VITERBI -9.2858 0.73334 STATS LOCAL FORWARD -2.6224 0.73334 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 0.81551 1.92926 1.92147 1.32449 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 2.43226 0.30836 2.99720 2.05899 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.43226 0.30836 2.99720 2.05899 2 C - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 0.22629 2.89556 2.65398 2.56559 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 0.22629 2.89556 2.65398 2.56559 4 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 0.22629 2.89556 2.65398 2.56559 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 0.22629 2.89556 2.65398 2.56559 6 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.29380 2.31310 2.79557 0.30234 7 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.22629 2.89556 2.65398 2.56559 8 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.29380 2.31310 2.79557 0.30234 9 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.29380 2.31310 2.79557 0.30234 10 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 0.22629 2.89556 2.65398 2.56559 11 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 2.29380 2.31310 2.79557 0.30234 12 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 0.22629 2.89556 2.65398 2.56559 13 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 2.61219 1.64945 2.32021 0.45221 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.61530 1.64944 2.32134 0.45168 15 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.61638 1.64944 2.32173 0.45150 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.61653 1.64944 2.32178 0.45147 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.61630 1.64944 2.32170 0.45151 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.61594 1.64944 2.32157 0.45157 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 2.85620 0.34100 2.58523 1.85741 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 2.04425 1.44814 1.81252 0.75020 21 u - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 0.51295 2.38137 1.55431 2.32777 22 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.61463 1.64945 2.32110 0.45180 23 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 0.22629 2.89556 2.65398 2.56559 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 0.22629 2.89556 2.65398 2.56559 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 0.22629 2.89556 2.65398 2.56559 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 0.22629 2.89556 2.65398 2.56559 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 0.22629 2.89556 2.65398 2.56559 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.33855 3.16095 0.22783 2.73506 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 0.22629 2.89556 2.65398 2.56559 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 0.22629 2.89556 2.65398 2.56559 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 0.22629 2.89556 2.65398 2.56559 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.22629 2.89556 2.65398 2.56559 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 0.22629 2.89556 2.65398 2.56559 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 0.22629 2.89556 2.65398 2.56559 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 0.51439 2.49813 1.48609 2.36832 36 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.55786 1.81016 2.19683 0.43426 37 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 1.71858 1.97985 0.91235 1.26936 38 g - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.13099 2.75148 0.29551 2.61330 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 0.51414 2.49885 1.48607 2.36932 40 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 0.51404 2.49914 1.48607 2.36972 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 0.51392 2.49949 1.48606 2.37021 42 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.51377 2.49992 1.48605 2.37080 43 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.51359 2.50044 1.48604 2.37153 44 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 0.51337 2.50107 1.48602 2.37241 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 0.22629 2.89556 2.65398 2.56559 46 A - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.29380 2.31310 2.79557 0.30234 47 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 2.29380 2.31310 2.79557 0.30234 48 U - - : 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 0.22629 2.89556 2.65398 2.56559 49 A - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //