# STOCKHOLM 1.0
#=GF ID LLnc147
#=GF AC RF02573
#=GF DE Lactococcus lactis non-coding RNA 147
#=GF AU Argasinska J; 0000-0003-2678-2824
#=GF GA 127.0
#=GF NC 40.6
#=GF TC 127.6
#=GF SE Argasinska J
#=GF SS Predicted; RNAfold;
#=GF TP Gene; sRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR SO; 0000370; small_regulatory_ncRNA;
#=GF DR GO; 0015976; carbon utilization;
#=GF RN [1]
#=GF RM 26950529
#=GF RT Transcriptome landscape of Lactococcus lactis reveals many novel RNAs
#=GF RT including a small regulatory RNA involved in carbon uptake and metabolism.
#=GF RA van der Meulen SB, de Jong A, Kok J
#=GF RL RNA Biol. 2016;13:353-366.
#=GF CC Hundreds of novel RNAs were identified by Meulen et al. LLnc147 was shown
#=GF CC to be involved in carbon uptake and metabolism. 
#=GF WK Lactococcus_lactis
#=GF SQ 2

CP002365.1/1778845-1778744 AUCCUUAUAGGAAAGCGUUUACCUAAAAGUCAUGGUUACGUAAAUAAGCUAUAGCGAGUAGCUUAAUUUCUUUCAAAUCCCUCCUAGUCAGGGGGAUUUUUU
AM406671.1/1942946-1942845 AUCCUUAUAGGAAAACGUUUACCUUUAAGUCAUGGUUACGUUACUAAGCUAUAGCGAGUAGCUUAAUUUCUUUCAGAUCCCUCCUAGUCAGGGGGAUUUUUU
#=GC SS_cons               :<<<<___>>>>:<<<<<--<<<__________>>>->>>>>::<<<<<<<<_____>>>>>>>>:::::::::<<<<<<<-<<<____>>>>>>>>>>:::
#=GC RF                    AuCCuUAUaGGaAagCGuUUaCCUaaAAGUCAUGGuUaCGcuAauaaGCuacAGCGAguaGCuuaAUUUCUUUCagauCCCUCCuAGUCaGGGGGaucuUUU
//
