# STOCKHOLM 1.0
#=GF ID UptR
#=GF AC RF02568
#=GF DE Escherichia coli small RNA (uptR) gene
#=GF AU Argasinska J; 0000-0003-2678-2824
#=GF GA 100.0
#=GF NC 36.2
#=GF TC 112.9
#=GF SE Argasinska J
#=GF SS Predicted; PMID:11157926
#=GF TP Gene; sRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 30.00 -Z 2958934 CM SEQDB
#=GF DR SO; 0000370; small_regulatory_ncRNA;
#=GF RN [1]
#=GF RM 11157926
#=GF RT Oversynthesis of a new Escherichia coli small RNA suppresses export
#=GF RT toxicity of DsbA'-PhoA unfoldable periplasmic proteins.
#=GF RA Guigueno A, Dassa J, Belin P, Boquet PL
#=GF RL J Bacteriol. 2001;183:1147-1158.
#=GF CC UptR scRNA transcribed from the uptR gene is implicated in suppressing
#=GF CC extracytoplasmic toxicity by reducing the amount of membrane-bound toxic
#=GF CC hybrid protein.
#=GF WK Escherichia_coli_sRNA
#=GF SQ 3

GQ398086.1/49166-49075   GCUGAAUAUGAUUCAAUAUCGCACGCUACUCAUCCAUCCCAGGAUAAUGAGUUCAUAGGUUGAAGUCUCAACACCCCCACUACGGGGGUGUU
AEHW01000045.1/5763-5674 GCUGAAUAUGAUUCAAUAUCGCACGCUACUCAUCCAUCCCAGGAUAAUGAGUACAUAGGUUGAAGUUUCACC--CCCCACUACGGGGAUGUU
AF272839.1/100-191       GCUGAAUAUGAUUCAAUAUCGCACGCUACUCAUCCAUCCAAGGAUAAUGAGUACAUAGGUUGAAGUUUCAACACCCCCACUACGGGGGUGUU
#=GC SS_cons             :::<<<<___>>>>:::::::::::::<<<<<<<<______>>>--->>>>>::::::::::::::::::<<<<<<<<_____>>>>>>>>:
#=GC RF                  GCUGaauAUGauuCAAUAUCGCACGCUaCuCauCCAUCCcAGGaUAAuGaGuaCAUAGGUUGAAGUuUCAaCaCCCCCACUACGGGGGuGuU
//
