INFERNAL1/a [1.1.5 | Sep 2023] NAME Virus-PTE ACC RF02521 DESC Panicum mosaic virus cap-independent translation enhancer RNA (PTE) STATES 264 NODES 69 CLEN 85 W 102 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 28 14:14:27 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/3DNew/RF02521/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 1.092773 CKSUM 56364242 NULL 0.000 0.000 0.000 0.000 GA 80.00 TC 108.70 NC 36.60 EFP7GF -7.3193 0.71876 ECMLC 0.70514 -4.29722 3.19899 1600000 237024 0.005063 ECMGC 0.37818 -16.68850 -4.03380 1600000 47916 0.008348 ECMLI 0.67470 -2.62905 4.95378 1600000 200027 0.005999 ECMGI 0.42436 -10.65682 0.32992 1600000 42354 0.009444 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 0 1 102 123 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 IL 1 1 2 1 6 5 36 104 125 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 6 36 104 124 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 3 87 u a - - MP 3 2 3 7 6 9 40 102 123 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 -3.545 -3.329 -3.447 0.321 -2.543 -4.065 1.765 -3.187 -3.462 0.709 -3.863 -1.243 2.886 -3.713 -0.236 -2.340 ML 4 2 3 7 6 5 34 101 122 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 4 33 101 121 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 2 28 98 119 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 5 35 102 123 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 5 36 102 122 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 4 86 a u - - MP 9 8 6 13 6 8 39 100 121 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 -3.284 -2.458 -3.330 2.845 -3.417 -4.451 0.857 -3.396 -3.250 1.641 -3.771 -0.031 0.432 -3.722 -1.090 -2.201 ML 10 8 6 13 6 4 33 99 120 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 4 33 99 119 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 2 28 96 117 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 5 35 100 121 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 5 35 100 120 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 5 85 G C - - MP 15 14 6 19 6 8 37 98 119 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 -4.051 -2.771 -4.111 0.639 -4.260 -4.402 0.214 -4.285 -3.840 3.415 -4.232 -0.456 -0.195 -4.006 -1.792 -2.999 ML 16 14 6 19 6 4 32 97 118 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 4 32 97 117 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 1 28 94 115 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 5 34 98 119 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 5 34 98 118 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 6 84 a u - - MP 21 20 6 25 6 8 36 96 117 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 -3.284 -2.458 -3.330 2.845 -3.417 -4.451 0.857 -3.396 -3.250 1.641 -3.771 -0.031 0.432 -3.722 -1.090 -2.201 ML 22 20 6 25 6 4 32 95 116 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 4 31 95 116 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 1 27 93 113 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 5 33 96 117 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 5 33 96 116 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 7 83 a u - - MP 27 26 6 31 6 7 34 94 115 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 -3.284 -2.458 -3.330 2.845 -3.417 -4.451 0.857 -3.396 -3.250 1.641 -3.771 -0.031 0.432 -3.722 -1.090 -2.201 ML 28 26 6 31 6 4 31 93 114 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 3 29 93 114 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 1 27 91 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 4 32 94 115 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 4 32 94 114 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 8 82 C G - - MP 33 32 6 37 4 5 32 92 113 -6.556 -6.764 -0.070 -5.178 -3.870 -3.699 -3.666 -0.007 -2.556 -4.163 3.265 -3.293 -3.701 0.366 -4.026 -1.639 1.015 -3.978 -0.254 -2.567 ML 34 32 6 37 4 3 30 92 113 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 2 28 92 113 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 1 26 91 112 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 4 31 94 115 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 4 31 93 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 9 - a - - - ML 39 38 6 41 3 4 31 90 111 -7.605 -0.026 -6.259 0.768 -0.781 -0.871 0.225 D 40 38 6 41 3 1 26 89 109 -6.174 -1.687 -0.566 IL 41 41 3 41 3 3 30 92 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 10 - c - - - ML 42 41 3 44 3 4 30 89 110 -8.022 -0.024 -6.339 -0.465 0.590 -1.219 0.422 D 43 41 3 44 3 1 25 88 108 -5.620 -0.734 -1.403 IL 44 44 3 44 3 3 29 90 110 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 81 - G - - MR 45 44 3 47 3 3 30 88 109 -8.022 -0.024 -6.339 -0.824 -1.907 1.465 -1.292 D 46 44 3 47 3 0 23 87 107 -6.390 -1.568 -0.620 IR 47 47 3 47 3 2 28 89 109 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 80 - A - - MR 48 47 3 50 5 3 29 87 108 -6.785 -0.049 -6.600 -6.813 -7.704 1.509 -1.667 -1.369 -1.149 D 49 47 3 50 5 0 22 86 106 -5.352 -0.707 -2.978 -4.409 -2.404 IR 50 50 3 50 5 2 27 87 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 11 79 g c - - MP 51 50 3 55 6 4 30 86 107 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 -2.443 -2.000 -2.599 1.233 -2.665 -3.372 1.154 -2.863 -0.290 2.275 -3.081 0.744 0.893 -2.710 -0.595 -1.675 ML 52 50 3 55 6 1 24 85 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 3 55 6 1 24 84 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 3 55 6 0 20 82 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 2 26 86 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 2 26 85 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 12 78 u a - - MP 57 56 6 61 6 4 29 84 105 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 -3.545 -3.329 -3.447 0.321 -2.543 -4.065 1.765 -3.187 -3.462 0.709 -3.863 -1.243 2.886 -3.713 -0.236 -2.340 ML 58 56 6 61 6 1 24 83 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 23 83 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 19 80 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 2 25 84 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 2 25 83 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 13 77 G C - - MP 63 62 6 67 6 4 27 82 103 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 -3.466 -2.424 -3.527 1.075 -3.881 -4.223 0.500 -3.787 -3.448 3.029 -3.893 0.869 0.190 -3.592 -1.456 -2.437 ML 64 62 6 67 6 1 23 81 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 22 81 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 19 78 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 24 82 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 2 25 81 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 14 76 G C - - MP 69 68 6 73 6 4 26 80 101 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 -3.471 -2.427 -3.532 1.071 -3.886 -4.225 0.497 -3.793 -3.452 3.035 -3.897 0.854 0.186 -3.595 -1.461 -2.443 ML 70 68 6 73 6 1 22 79 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 21 79 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 19 77 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 24 80 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 23 80 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 15 75 G C - - MP 75 74 6 79 4 2 24 78 99 -6.556 -6.764 -0.070 -5.178 -4.051 -2.771 -4.111 0.639 -4.260 -4.402 0.214 -4.285 -3.840 3.415 -4.232 -0.456 -0.195 -4.006 -1.792 -2.999 ML 76 74 6 79 4 1 21 78 99 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 4 1 19 78 98 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 78 74 6 79 4 0 18 77 97 -4.568 -4.250 -2.265 -0.520 IL 79 79 5 79 4 1 23 79 100 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 80 80 6 80 3 1 22 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - A - - - ML 81 80 6 83 3 1 22 76 96 -7.605 -0.026 -6.259 1.509 -1.667 -1.369 -1.149 D 82 80 6 83 3 0 18 74 95 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 22 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - U - - - ML 84 83 3 86 3 1 22 75 95 -7.605 -0.026 -6.259 -0.857 -0.973 -1.548 1.377 D 85 83 3 86 3 0 17 73 94 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 21 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - A - - - ML 87 86 3 89 3 1 21 74 94 -7.605 -0.026 -6.259 1.509 -1.667 -1.369 -1.149 D 88 86 3 89 3 0 16 72 92 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 20 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - G - - - ML 90 89 3 92 3 1 20 73 93 -7.605 -0.026 -6.259 -0.824 -1.907 1.465 -1.292 D 91 89 3 92 3 0 16 71 91 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 20 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - G - - - ML 93 92 3 95 3 1 19 72 92 -7.605 -0.026 -6.259 -0.824 -1.907 1.465 -1.292 D 94 92 3 95 3 0 15 70 90 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 19 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - G - - - ML 96 95 3 98 3 1 19 71 91 -7.605 -0.026 -6.259 -0.824 -1.907 1.465 -1.292 D 97 95 3 98 3 0 15 69 89 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 18 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - G - - - ML 99 98 3 101 3 1 18 70 90 -8.022 -0.024 -6.339 -0.824 -1.907 1.465 -1.292 D 100 98 3 101 3 0 14 68 88 -5.620 -0.734 -1.403 IL 101 101 3 101 3 1 17 70 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 74 - G - - MR 102 101 3 104 3 1 17 69 89 -8.022 -0.024 -6.339 -0.824 -1.907 1.465 -1.292 D 103 101 3 104 3 0 13 67 87 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 16 69 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 73 - C - - MR 105 104 3 107 3 1 16 68 88 -8.022 -0.024 -6.339 -0.922 1.300 -1.702 -0.508 D 106 104 3 107 3 0 12 66 86 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 16 68 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 72 - G - - MR 108 107 3 110 3 1 15 66 87 -8.022 -0.024 -6.339 -0.824 -1.907 1.465 -1.292 D 109 107 3 110 3 0 11 65 85 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 15 67 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 71 - G - - MR 111 110 3 113 3 1 15 65 86 -8.022 -0.024 -6.339 -0.824 -1.907 1.465 -1.292 D 112 110 3 113 3 0 11 64 84 -6.390 -1.568 -0.620 IR 113 113 3 113 3 1 14 66 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 70 - A - - MR 114 113 3 116 3 1 14 64 85 -8.022 -0.024 -6.339 1.509 -1.667 -1.369 -1.149 D 115 113 3 116 3 0 10 63 83 -6.390 -1.568 -0.620 IR 116 116 3 116 3 1 13 65 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 69 - A - - MR 117 116 3 119 3 1 13 63 84 -8.022 -0.024 -6.339 1.509 -1.667 -1.369 -1.149 D 118 116 3 119 3 0 9 62 82 -6.390 -1.568 -0.620 IR 119 119 3 119 3 1 13 64 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 68 - C - - MR 120 119 3 122 3 1 12 62 83 -8.022 -0.024 -6.339 -0.922 1.300 -1.702 -0.508 D 121 119 3 122 3 0 9 61 81 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 12 63 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 67 - G - - MR 123 122 3 125 3 1 11 61 81 -8.022 -0.024 -6.339 -0.824 -1.907 1.465 -1.292 D 124 122 3 125 3 0 8 60 80 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 11 62 82 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 66 - G - - MR 126 125 3 128 5 1 10 60 80 -6.785 -0.049 -6.600 -6.813 -7.704 -0.824 -1.907 1.465 -1.292 D 127 125 3 128 5 0 8 59 79 -5.352 -0.707 -2.978 -4.409 -2.404 IR 128 128 3 128 5 1 10 61 81 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 23 65 a u - - MP 129 128 3 133 4 2 9 59 79 -6.556 -6.764 -0.070 -5.178 -3.284 -2.458 -3.330 2.845 -3.417 -4.451 0.857 -3.396 -3.250 1.641 -3.771 -0.031 0.432 -3.722 -1.090 -2.201 ML 130 128 3 133 4 1 8 60 80 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 131 128 3 133 4 1 7 59 79 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 132 128 3 133 4 0 6 58 78 -4.568 -4.250 -2.265 -0.520 IL 133 133 5 133 4 1 9 61 81 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 134 134 6 134 3 1 8 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 24 - U - - - ML 135 134 6 137 3 1 7 57 77 -7.605 -0.026 -6.259 -0.857 -0.973 -1.548 1.377 D 136 134 6 137 3 0 6 56 76 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 8 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 25 - G - - - ML 138 137 3 140 2 1 6 56 76 -7.913 -0.006 -0.824 -1.907 1.465 -1.292 D 139 137 3 140 2 0 5 55 75 -8.445 -0.004 IL 140 140 3 140 2 1 7 57 77 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 35 ] - - - - - - B 141 140 3 142 225 0 5 55 75 [ BEGL 36 ] - - - - - - S 142 141 1 143 4 0 0 42 62 -0.051 -6.649 -6.056 -6.696 [ MATP 37 ] 26 52 a u - - MP 143 142 1 147 4 2 2 42 62 -6.556 -6.764 -0.070 -5.178 -3.284 -2.458 -3.330 2.845 -3.417 -4.451 0.857 -3.396 -3.250 1.641 -3.771 -0.031 0.432 -3.722 -1.090 -2.201 ML 144 142 1 147 4 1 1 43 62 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 145 142 1 147 4 1 1 42 62 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 146 142 1 147 4 0 0 41 61 -4.568 -4.250 -2.265 -0.520 IL 147 147 5 147 4 1 1 44 64 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 148 148 6 148 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 27 - c - - - ML 149 148 6 151 3 1 1 40 59 -7.605 -0.026 -6.259 -0.465 0.590 -1.219 0.422 D 150 148 6 151 3 0 0 38 58 -6.174 -1.687 -0.566 IL 151 151 3 151 3 1 1 42 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 28 - C - - - ML 152 151 3 154 3 1 1 39 58 -7.605 -0.026 -6.259 -0.922 1.300 -1.702 -0.508 D 153 151 3 154 3 0 0 37 57 -6.174 -1.687 -0.566 IL 154 154 3 154 3 1 1 41 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 29 - U - - - ML 155 154 3 157 3 1 1 38 57 -7.605 -0.026 -6.259 -0.857 -0.973 -1.548 1.377 D 156 154 3 157 3 0 0 36 56 -6.174 -1.687 -0.566 IL 157 157 3 157 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 30 - U - - - ML 158 157 3 160 3 1 1 36 56 -7.605 -0.026 -6.259 -0.857 -0.973 -1.548 1.377 D 159 157 3 160 3 0 0 35 54 -6.174 -1.687 -0.566 IL 160 160 3 160 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 31 - G - - - ML 161 160 3 163 3 1 1 35 54 -7.605 -0.026 -6.259 -0.824 -1.907 1.465 -1.292 D 162 160 3 163 3 0 0 34 53 -6.174 -1.687 -0.566 IL 163 163 3 163 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 32 - U - - - ML 164 163 3 166 3 1 1 34 53 -7.605 -0.026 -6.259 -0.857 -0.973 -1.548 1.377 D 165 163 3 166 3 0 0 33 52 -6.174 -1.687 -0.566 IL 166 166 3 166 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 33 - C - - - ML 167 166 3 169 3 1 1 33 52 -8.022 -0.024 -6.339 -0.922 1.300 -1.702 -0.508 D 168 166 3 169 3 0 0 32 51 -5.620 -0.734 -1.403 IL 169 169 3 169 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 45 ] - 51 - C - - MR 170 169 3 172 3 1 1 32 51 -8.022 -0.024 -6.339 -0.922 1.300 -1.702 -0.508 D 171 169 3 172 3 0 0 30 49 -6.390 -1.568 -0.620 IR 172 172 3 172 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 46 ] - 50 - C - - MR 173 172 3 175 3 1 1 31 50 -8.022 -0.024 -6.339 -0.922 1.300 -1.702 -0.508 D 174 172 3 175 3 0 0 30 48 -6.390 -1.568 -0.620 IR 175 175 3 175 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 47 ] - 49 - C - - MR 176 175 3 178 5 1 1 30 49 -6.785 -0.049 -6.600 -6.813 -7.704 -0.922 1.300 -1.702 -0.508 D 177 175 3 178 5 0 0 29 48 -5.352 -0.707 -2.978 -4.409 -2.404 IR 178 178 3 178 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 34 48 G C - - MP 179 178 3 183 6 2 2 29 48 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 -4.051 -2.771 -4.111 0.639 -4.260 -4.402 0.214 -4.285 -3.840 3.415 -4.232 -0.456 -0.195 -4.006 -1.792 -2.999 ML 180 178 3 183 6 1 1 28 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 181 178 3 183 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 182 178 3 183 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 183 183 5 183 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 184 184 6 184 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 35 47 a u - - MP 185 184 6 189 6 2 2 27 46 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 -3.284 -2.458 -3.330 2.845 -3.417 -4.451 0.857 -3.396 -3.250 1.641 -3.771 -0.031 0.432 -3.722 -1.090 -2.201 ML 186 184 6 189 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 187 184 6 189 6 1 1 26 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 188 184 6 189 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 189 189 5 189 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 190 190 6 190 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 36 46 C G - - MP 191 190 6 195 6 2 2 25 44 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 -3.870 -3.699 -3.666 -0.007 -2.556 -4.163 3.265 -3.293 -3.701 0.366 -4.026 -1.639 1.015 -3.978 -0.254 -2.567 ML 192 190 6 195 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 193 190 6 195 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 194 190 6 195 6 0 0 22 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 195 195 5 195 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 196 196 6 196 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 37 45 C G - - MP 197 196 6 201 6 2 2 23 42 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 -3.870 -3.699 -3.666 -0.007 -2.556 -4.163 3.265 -3.293 -3.701 0.366 -4.026 -1.639 1.015 -3.978 -0.254 -2.567 ML 198 196 6 201 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 199 196 6 201 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 200 196 6 201 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 201 201 5 201 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 202 202 6 202 5 1 1 23 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 38 44 G C - - MP 203 202 6 207 4 2 2 21 40 -6.556 -6.764 -0.070 -5.178 -4.051 -2.771 -4.111 0.639 -4.260 -4.402 0.214 -4.285 -3.840 3.415 -4.232 -0.456 -0.195 -4.006 -1.792 -2.999 ML 204 202 6 207 4 1 1 22 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 205 202 6 207 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 206 202 6 207 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 207 207 5 207 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 208 208 6 208 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 39 - a - - - ML 209 208 6 211 3 1 1 18 36 -7.605 -0.026 -6.259 0.322 -0.707 -0.099 0.268 D 210 208 6 211 3 0 0 17 36 -6.174 -1.687 -0.566 IL 211 211 3 211 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 40 - u - - - ML 212 211 3 214 3 1 1 16 35 -7.605 -0.026 -6.259 0.221 -0.662 -0.928 0.746 D 213 211 3 214 3 0 0 16 35 -6.174 -1.687 -0.566 IL 214 214 3 214 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 41 - u - - - ML 215 214 3 217 3 1 1 15 34 -7.605 -0.026 -6.259 0.221 -0.662 -0.928 0.746 D 216 214 3 217 3 0 0 15 33 -6.174 -1.687 -0.566 IL 217 217 3 217 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 42 - c - - - ML 218 217 3 220 3 1 1 13 32 -7.605 -0.026 -6.259 0.251 0.456 -0.971 -0.108 D 219 217 3 220 3 0 0 13 32 -6.174 -1.687 -0.566 IL 220 220 3 220 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 43 - u - - - ML 221 220 3 223 2 1 1 1 1 * 0.000 0.221 -0.662 -0.928 0.746 D 222 220 3 223 2 0 0 0 0 * 0.000 IL 223 223 3 223 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 58 ] - - - - - - E 224 223 3 -1 0 0 0 0 0 [ BEGR 59 ] - - - - - - S 225 141 1 226 5 0 0 26 45 -6.785 -0.049 -6.600 -6.813 -7.704 IL 226 226 2 226 5 1 1 27 46 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 60 ] 53 64 G C - - MP 227 226 2 231 6 2 2 26 45 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 -4.051 -2.771 -4.111 0.639 -4.260 -4.402 0.214 -4.285 -3.840 3.415 -4.232 -0.456 -0.195 -4.006 -1.792 -2.999 ML 228 226 2 231 6 1 1 25 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 229 226 2 231 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 230 226 2 231 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 231 231 5 231 6 1 1 26 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 232 232 6 232 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 61 ] 54 63 C G - - MP 233 232 6 237 6 2 2 24 43 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 -3.870 -3.699 -3.666 -0.007 -2.556 -4.163 3.265 -3.293 -3.701 0.366 -4.026 -1.639 1.015 -3.978 -0.254 -2.567 ML 234 232 6 237 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 235 232 6 237 6 1 1 23 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 236 232 6 237 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 237 237 5 237 6 1 1 24 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 238 238 6 238 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 62 ] 55 62 u a - - MP 239 238 6 243 6 2 2 22 41 -8.970 -8.910 -0.023 -7.686 -7.966 -8.361 -3.545 -3.329 -3.447 0.321 -2.543 -4.065 1.765 -3.187 -3.462 0.709 -3.863 -1.243 2.886 -3.713 -0.236 -2.340 ML 240 238 6 243 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 241 238 6 243 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 242 238 6 243 6 0 0 20 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 243 243 5 243 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 244 244 6 244 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 63 ] 56 61 C G - - MP 245 244 6 249 4 2 2 20 39 -6.556 -6.764 -0.070 -5.178 -3.870 -3.699 -3.666 -0.007 -2.556 -4.163 3.265 -3.293 -3.701 0.366 -4.026 -1.639 1.015 -3.978 -0.254 -2.567 ML 246 244 6 249 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 247 244 6 249 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 248 244 6 249 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 249 249 5 249 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 250 250 6 250 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 57 - C - - - ML 251 250 6 253 3 1 1 16 35 -7.605 -0.026 -6.259 -0.922 1.300 -1.702 -0.508 D 252 250 6 253 3 0 0 16 35 -6.174 -1.687 -0.566 IL 253 253 3 253 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 58 - u - - - ML 254 253 3 256 3 1 1 15 34 -7.605 -0.026 -6.259 -0.224 -0.693 -0.147 0.698 D 255 253 3 256 3 0 0 15 33 -6.174 -1.687 -0.566 IL 256 256 3 256 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 59 - U - - - ML 257 256 3 259 3 1 1 13 32 -7.605 -0.026 -6.259 -0.857 -0.973 -1.548 1.377 D 258 256 3 259 3 0 0 13 32 -6.174 -1.687 -0.566 IL 259 259 3 259 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 60 - c - - - ML 260 259 3 262 2 1 1 1 1 * 0.000 -0.465 0.590 -1.219 0.422 D 261 259 3 262 2 0 0 0 0 * 0.000 IL 262 262 3 262 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 68 ] - - - - - - E 263 262 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME Virus-PTE ACC RF02521 DESC Panicum mosaic virus cap-independent translation enhancer RNA (PTE) LENG 85 MAXL 180 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Sun Jul 28 14:14:27 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/3DNew/RF02521/CM NSEQ 3 EFFN 1.672852 CKSUM 56364242 STATS LOCAL MSV -8.2094 0.71876 STATS LOCAL VITERBI -9.6961 0.71876 STATS LOCAL FORWARD -3.4552 0.71876 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.55969 1.36169 1.21896 1.43534 1.38629 1.38629 1.38629 1.38629 0.23106 1.70152 3.73371 0.78555 0.60856 0.00000 * 1 2.63369 1.64551 2.32343 0.45046 3 U - - ( 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 2 0.51442 2.37986 1.55000 2.32951 4 A - - ( 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 3 2.37029 2.87851 0.23417 2.82850 5 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 4 0.51553 2.37729 1.54992 2.32532 6 A - - ( 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 5 0.51581 2.37665 1.54990 2.32429 7 A - - ( 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 6 2.85449 0.34244 2.58024 1.85393 8 C - - ( 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 7 0.80130 2.00868 2.08751 1.22726 9 a - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 8 1.85808 0.86927 2.40253 1.09577 10 c - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 9 1.73646 1.95303 0.65753 1.80858 11 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 10 2.60999 1.64557 2.31497 0.45446 12 U - - ( 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 11 1.95671 2.52648 0.37322 2.40543 13 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 12 1.96004 2.52982 0.37169 2.40897 14 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 13 2.36403 2.87238 0.23602 2.81954 15 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 14 0.22783 2.88950 2.64854 2.55898 16 A - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 15 2.28835 2.30863 2.78979 0.30417 17 U - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 16 0.22783 2.88950 2.64854 2.55898 18 A - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 17 2.33207 3.15336 0.22965 2.72743 19 G - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 18 2.33207 3.15336 0.22965 2.72743 20 G - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 19 2.33207 3.15335 0.22965 2.72743 21 G - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 20 2.33207 3.15335 0.22965 2.72743 22 G - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 21 0.51696 2.37400 1.54982 2.31999 23 A - - ( 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 22 2.28835 2.30863 2.78979 0.30417 24 U - - , 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 23 2.33207 3.15336 0.22965 2.72743 25 G - - , 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 24 0.51536 2.37770 1.54994 2.32599 26 A - - < 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 25 1.85808 0.86927 2.40253 1.09577 27 c - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 26 2.42507 0.31073 2.98970 2.05330 28 C - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 27 2.28835 2.30863 2.78979 0.30417 29 U - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 28 2.28835 2.30863 2.78979 0.30417 30 U - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 29 2.33207 3.15335 0.22965 2.72743 31 G - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 30 2.28835 2.30863 2.78979 0.30417 32 U - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 31 2.42507 0.31073 2.98970 2.05330 33 C - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 32 2.36126 2.86966 0.23685 2.81559 34 G - - < 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 33 0.51641 2.37526 1.54986 2.32203 35 A - - < 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 34 2.85173 0.34287 2.57911 1.85351 36 C - - < 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 35 2.85189 0.34285 2.57917 1.85353 37 C - - < 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 36 2.36401 2.87235 0.23603 2.81951 38 G - - < 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 37 1.16001 1.93984 1.42705 1.19476 39 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 38 1.24797 1.93096 2.13855 0.79833 40 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 39 1.24797 1.93096 2.13855 0.79833 41 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 40 1.22256 0.96063 2.19054 1.55583 42 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 41 1.24797 1.93096 2.13855 0.79833 43 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 42 3.03720 0.27607 2.70254 2.06959 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 43 2.12800 2.74613 0.29684 2.60932 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 44 2.12855 2.74678 0.29661 2.61017 46 G - - > 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 45 2.55711 1.80535 2.19219 0.43636 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 46 3.04563 0.27498 2.70587 2.07123 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 47 2.42507 0.31073 2.98970 2.05329 49 C - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 48 2.42507 0.31073 2.98970 2.05330 50 C - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 49 2.42507 0.31073 2.98970 2.05329 51 C - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 50 2.54443 1.80469 2.18832 0.43874 52 U - - > 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 51 2.36847 2.87673 0.23471 2.82589 53 G - - < 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 52 2.85853 0.34180 2.58190 1.85455 54 C - - < 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 53 2.61473 1.64556 2.31668 0.45365 55 U - - < 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 54 2.85545 0.34228 2.58064 1.85408 56 C - - < 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 55 2.42507 0.31073 2.98970 2.05330 57 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 56 1.63520 1.95838 1.47656 0.83108 58 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 57 2.28835 2.30863 2.78979 0.30417 59 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 58 1.85808 0.86927 2.40253 1.09577 60 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 59 2.12925 2.74758 0.29632 2.61123 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 60 0.51659 2.49456 1.48212 2.36698 62 A - - > 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 61 2.13131 2.74997 0.29548 2.61440 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 62 3.05505 0.27376 2.70957 2.07304 64 C - - > 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 63 2.55827 1.80541 2.19255 0.43615 65 U - - ) 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 64 2.33207 3.15336 0.22965 2.72743 66 G - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 65 2.33207 3.15336 0.22965 2.72743 67 G - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 66 2.42507 0.31073 2.98970 2.05330 68 C - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 67 0.22783 2.88950 2.64854 2.55898 69 A - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 68 0.22783 2.88950 2.64854 2.55898 70 A - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 69 2.33207 3.15335 0.22965 2.72743 71 G - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 70 2.33207 3.15336 0.22965 2.72743 72 G - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 71 2.42507 0.31073 2.98970 2.05329 73 C - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 72 2.33207 3.15336 0.22965 2.72743 74 G - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 73 3.03725 0.27606 2.70256 2.06960 75 C - - ) 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 74 2.63963 0.56071 2.34571 1.33930 76 C - - ) 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 75 2.63732 0.56528 2.34273 1.33111 77 C - - ) 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 76 0.51683 2.49387 1.48214 2.36602 78 A - - ) 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 77 1.65111 1.06291 1.76081 1.23510 79 c - - ) 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 78 0.22783 2.88950 2.64854 2.55898 80 A - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 79 2.33207 3.15335 0.22965 2.72743 81 G - - - 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 80 2.12867 2.74691 0.29656 2.61034 82 G - - ) 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 81 2.55772 1.80538 2.19238 0.43625 83 U - - ) 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 82 2.56002 1.80550 2.19308 0.43582 84 U - - ) 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 83 3.05429 0.27386 2.70927 2.07289 85 C - - ) 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 84 2.56843 1.80594 2.19562 0.43427 86 U - - ) 1.38629 1.38629 1.38629 1.38629 0.04899 3.73371 3.73371 1.46634 0.26236 1.09861 0.40547 85 0.51407 2.50186 1.48193 2.37720 87 A - - ) 1.38629 1.38629 1.38629 1.38629 0.20687 1.67733 * 0.24420 1.52940 0.00000 * //