# STOCKHOLM 1.0
#=GF ID GlsR18
#=GF AC RF02481
#=GF DE Small nucleolar RNA GlsR18
#=GF AU Eberhardt R; 0000-0001-6152-1369
#=GF GA 100.0
#=GF NC 39.3
#=GF TC 173.4
#=GF SE Predicted
#=GF SS Predicted; WAR
#=GF TP Gene; snRNA; snoRNA; HACA-box;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 25.47 -Z 2958934 CM SEQDB
#=GF DR SO; 0000594; H_ACA_box_snoRNA;
#=GF DR GO; 0006396; RNA processing;
#=GF DR GO; 0005730; nucleolus;
#=GF RN [1]
#=GF RM 23019220
#=GF RT Evolutionarily divergent spliceosomal snRNAs and a conserved non-coding
#=GF RT RNA processing motif in Giardia lamblia.
#=GF RA Hudson AJ, Moore AN, Elniski D, Joseph J, Yee J, Russell AG
#=GF RL Nucleic Acids Res. 2012;40:10995-11008.
#=GF WK Small_nucleolar_RNA
#=GF SQ 3

AACB02000045.1/26369-26517 ACGCAGCCUAAUCACCGCCCCUAUAGUCCUUUUCUAAACGC-GUGGCCGGUGCAGCUGCCCGCUGGCGCUUGCGAGCGUGCACAGGCCUACAUCCAGGGUCAUAGGUGGGGAGCGGAUCCCGUCCAUCCUCAAUCCGGGCCCGCACAGUC
ACGJ01001410.1/76727-76873 ACGCAACCUAAUCACCGCCCCGACAGUCCUUCGCUUAAUUAUGCGGCCGGUGCGGCUGCCCACUGGUACCUUUGGGCGCGCACAGGCCCACAGCCGGGGUCAUAGGUGGGGAGCGGAUACUGUCCAUCCUCAAUCCGGGCCCUCACA---
ACVC01000024.1/8383-8527   --GCAGCCUAAUCACCGCCCCUAUAGUCCUUUUCUAAACCUUAUGGCUGGUGCAGCCGCCCGCCAGUGCUUGCGGGUGUGCACAGGCCUACAUCUAGGGUCAUAGGUGGGGAGCGGAUCCUGUCCAUCCUCAAUCCGGGCCCGCACA---
#=GC SS_cons               ::((,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,<<<<-<<<<<--<<<<<<<________>>>>>>>>>>>>->>>>,,,,,,,,,,,,,,,,<<<<<<<<--<<<<___>>>>->>>>>>-->>,,,,,,)):::...
#=GC RF                    AcGcAgCCUAAUCACCGCCCCuAuAGUCCUUuuCUaAAcuuUguGGCcGGuGCgGCcGCcCgcugGugCuUgcGgGCgcGCaCAgGCCuACAuCcaGGGUCAUAGGuGgGGaGCGGaucCuguCCAuCCuCaAUCCGGGCCCgCACA...
//
