INFERNAL1/a [1.1.5 | Sep 2023] NAME SpF51_sRNA ACC RF02438 DESC Streptococcus sRNA SpF51 STATES 144 NODES 41 CLEN 45 W 80 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 4 17:54:51 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02438/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 8 EFFN 3.957031 CKSUM 3157105905 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 60.00 NC 39.90 EFP7GF -11.2925 0.71955 ECMLC 0.60614 -8.55005 2.21477 1600000 818358 0.001466 ECMGC 0.47371 -14.21418 -0.88878 1600000 220535 0.001814 ECMLI 0.55126 -7.76172 3.60034 1600000 630050 0.001905 ECMGI 0.47964 -11.57072 1.13328 1600000 177155 0.002258 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 80 124 -7.604 -7.811 -0.034 -6.225 IL 1 1 2 1 4 1 10 82 127 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 10 81 126 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 9 80 125 -8.939 -0.012 -7.257 1.887 -3.602 -3.121 -3.268 D 4 2 3 5 3 0 6 78 123 -5.620 -0.734 -1.403 IL 5 5 3 5 3 1 9 80 125 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 50 - U - - MR 6 5 3 8 3 1 8 79 124 -8.939 -0.012 -7.257 -2.658 -2.461 -3.431 1.835 D 7 5 3 8 3 0 5 77 122 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 8 79 124 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 49 - U - - MR 9 8 3 11 3 1 7 78 123 -8.939 -0.012 -7.257 -2.658 -2.461 -3.431 1.835 D 10 8 3 11 3 0 5 76 121 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 7 78 123 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 48 - U - - MR 12 11 3 14 3 1 6 77 122 -8.939 -0.012 -7.257 -2.658 -2.461 -3.431 1.835 D 13 11 3 14 3 0 4 75 120 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 6 77 122 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 47 - U - - MR 15 14 3 17 2 1 5 76 121 -9.072 -0.003 -2.658 -2.461 -3.431 1.835 D 16 14 3 17 2 0 4 75 120 -4.432 -0.068 IR 17 17 3 17 2 1 5 76 121 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 6 ] - - - - - - B 18 17 3 19 75 0 4 75 120 [ BEGL 7 ] - - - - - - S 19 18 1 20 4 0 0 32 51 -0.034 -7.202 -6.609 -7.249 [ MATP 8 ] 2 19 G C - - MP 20 19 1 24 6 2 2 32 51 -9.394 -9.333 -0.017 -8.110 -8.390 -8.785 -5.921 -3.676 -6.243 -0.641 -6.858 -5.129 -1.932 -6.491 -5.019 3.827 -5.290 -1.443 -2.295 -5.216 -4.051 -5.103 ML 21 19 1 24 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 22 19 1 24 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 23 19 1 24 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 24 24 5 24 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 25 25 6 25 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 3 18 u a - - MP 26 25 6 30 6 2 2 30 49 -9.394 -9.333 -0.017 -8.110 -8.390 -8.785 -4.387 -4.407 -4.177 -0.673 -2.980 -4.660 1.347 -3.744 -4.202 -0.530 -4.543 -2.458 2.870 -4.494 1.998 -3.070 ML 27 25 6 30 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 28 25 6 30 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 29 25 6 30 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 30 30 5 30 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 31 31 6 31 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 4 17 a u - - MP 32 31 6 36 6 2 2 28 47 -9.394 -9.333 -0.017 -8.110 -8.390 -8.785 -3.524 -2.697 -3.671 2.575 -4.181 -4.830 -0.225 -3.898 -3.560 1.084 -4.094 2.012 -0.433 -4.018 -1.995 0.441 ML 33 31 6 36 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 34 31 6 36 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 35 31 6 36 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 36 36 5 36 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 37 37 6 37 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 5 16 U A - - MP 38 37 6 42 4 2 2 26 45 -7.604 -7.811 -0.034 -6.225 -5.854 -5.698 -5.494 -1.920 -4.148 -5.901 0.182 -4.936 -5.489 -1.839 -5.783 -3.560 3.772 -5.913 -1.785 -4.054 ML 39 37 6 42 4 1 1 27 46 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 40 37 6 42 4 1 1 26 45 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 41 37 6 42 4 0 0 25 44 -4.568 -4.250 -2.265 -0.520 IL 42 42 5 42 4 1 1 28 47 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 43 43 6 43 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 6 - A - - - ML 44 43 6 46 3 1 1 23 42 -8.582 -0.013 -7.236 1.887 -3.602 -3.121 -3.268 D 45 43 6 46 3 0 0 22 41 -6.174 -1.687 -0.566 IL 46 46 3 46 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 7 - G - - - ML 47 46 3 49 3 1 1 22 41 -8.582 -0.013 -7.236 -2.805 -4.175 1.894 -3.539 D 48 46 3 49 3 0 0 21 40 -6.174 -1.687 -0.566 IL 49 49 3 49 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 8 - U - - - ML 50 49 3 52 3 1 1 21 39 -8.582 -0.013 -7.236 -1.698 -0.789 -2.454 1.551 D 51 49 3 52 3 0 0 20 39 -6.174 -1.687 -0.566 IL 52 52 3 52 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 9 - C - - - ML 53 52 3 55 3 1 1 20 38 -8.582 -0.013 -7.236 -3.208 1.862 -3.997 -2.359 D 54 52 3 55 3 0 0 19 38 -6.174 -1.687 -0.566 IL 55 55 3 55 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 10 - U - - - ML 56 55 3 58 3 1 1 18 37 -8.582 -0.013 -7.236 -2.658 -2.461 -3.431 1.835 D 57 55 3 58 3 0 0 18 37 -6.174 -1.687 -0.566 IL 58 58 3 58 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 11 - C - - - ML 59 58 3 61 3 1 1 17 36 -8.582 -0.013 -7.236 -3.208 1.862 -3.997 -2.359 D 60 58 3 61 3 0 0 17 35 -6.174 -1.687 -0.566 IL 61 61 3 61 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 12 - C - - - ML 62 61 3 64 3 1 1 16 34 -8.582 -0.013 -7.236 -1.985 1.552 -2.873 -0.558 D 63 61 3 64 3 0 0 16 34 -6.174 -1.687 -0.566 IL 64 64 3 64 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 13 - U - - - ML 65 64 3 67 3 1 1 14 33 -8.582 -0.013 -7.236 -2.658 -2.461 -3.431 1.835 D 66 64 3 67 3 0 0 15 33 -6.174 -1.687 -0.566 IL 67 67 3 67 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 14 - A - - - ML 68 67 3 70 3 1 1 13 31 -8.582 -0.013 -7.236 1.887 -3.602 -3.121 -3.268 D 69 67 3 70 3 0 0 13 32 -6.174 -1.687 -0.566 IL 70 70 3 70 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 15 - A - - - ML 71 70 3 73 2 1 1 1 1 * 0.000 1.887 -3.602 -3.121 -3.268 D 72 70 3 73 2 0 0 0 0 * 0.000 IL 73 73 3 73 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 22 ] - - - - - - E 74 73 3 -1 0 0 0 0 0 [ BEGR 23 ] - - - - - - S 75 18 1 76 3 0 0 57 102 -8.582 -0.013 -7.236 IL 76 76 2 76 3 1 1 58 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 20 - A - - - ML 77 76 2 79 3 1 1 57 102 -8.582 -0.013 -7.236 1.887 -3.602 -3.121 -3.268 D 78 76 2 79 3 0 0 55 100 -6.174 -1.687 -0.566 IL 79 79 3 79 3 1 1 57 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 21 - C - - - ML 80 79 3 82 3 1 1 56 101 -8.582 -0.013 -7.236 -0.506 1.104 -1.902 -0.187 D 81 79 3 82 3 0 0 54 99 -6.174 -1.687 -0.566 IL 82 82 3 82 3 1 1 56 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 22 - u - - - ML 83 82 3 85 3 1 1 55 100 -8.582 -0.013 -7.236 0.101 -1.071 -0.730 0.886 D 84 82 3 85 3 0 0 53 98 -6.174 -1.687 -0.566 IL 85 85 3 85 3 1 1 55 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 23 - u - - - ML 86 85 3 88 5 1 1 54 99 -7.646 -0.027 -7.461 -7.673 -8.565 0.303 -1.212 -1.503 0.987 D 87 85 3 88 5 0 0 52 97 -4.959 -0.803 -4.221 -2.596 -2.508 IL 88 88 3 88 5 1 1 54 99 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 24 46 A U - - MP 89 88 3 93 6 2 2 53 98 -9.394 -9.333 -0.017 -8.110 -8.390 -8.785 -4.298 -3.101 -4.408 3.463 -5.654 -6.473 -1.280 -4.511 -4.149 0.562 -4.765 1.056 -1.439 -5.261 -3.165 -3.132 ML 90 88 3 93 6 1 1 51 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 91 88 3 93 6 1 1 51 95 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 92 88 3 93 6 0 0 47 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 93 93 5 93 6 1 1 52 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 94 94 6 94 5 1 1 52 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 25 45 G C - - MP 95 94 6 99 6 2 2 51 96 -9.394 -9.333 -0.017 -8.110 -8.390 -8.785 -5.921 -3.676 -6.243 -0.641 -6.858 -5.129 -1.932 -6.491 -5.019 3.827 -5.290 -1.443 -2.295 -5.216 -4.051 -5.103 ML 96 94 6 99 6 1 1 49 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 97 94 6 99 6 1 1 49 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 98 94 6 99 6 0 0 45 90 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 99 99 5 99 6 1 1 50 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 100 100 6 100 5 1 1 50 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 26 44 C G - - MP 101 100 6 105 6 2 2 49 94 -9.394 -9.333 -0.017 -8.110 -8.390 -8.785 -5.927 -5.948 -5.364 -2.116 -3.850 -5.593 3.822 -4.803 -5.498 -2.010 -5.571 -3.958 -0.521 -5.899 -1.629 -4.306 ML 102 100 6 105 6 1 1 47 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 103 100 6 105 6 1 1 47 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 104 100 6 105 6 0 0 43 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 105 105 5 105 6 1 1 48 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 106 106 6 106 5 1 1 48 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 27 43 C G - - MP 107 106 6 111 6 2 2 47 92 -9.394 -9.333 -0.017 -8.110 -8.390 -8.785 -5.927 -5.948 -5.364 -2.116 -3.850 -5.593 3.822 -4.803 -5.498 -2.010 -5.571 -3.958 -0.521 -5.899 -1.629 -4.306 ML 108 106 6 111 6 1 1 45 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 109 106 6 111 6 1 1 45 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 110 106 6 111 6 0 0 41 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 111 111 5 111 6 1 1 46 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 112 112 6 112 5 1 1 46 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 28 42 C G - - MP 113 112 6 117 6 2 2 45 90 -9.394 -9.333 -0.017 -8.110 -8.390 -8.785 -5.927 -5.948 -5.364 -2.116 -3.850 -5.593 3.822 -4.803 -5.498 -2.010 -5.571 -3.958 -0.521 -5.899 -1.629 -4.306 ML 114 112 6 117 6 1 1 43 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 115 112 6 117 6 1 1 42 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 116 112 6 117 6 0 0 40 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 117 117 5 117 6 1 1 44 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 118 118 6 118 5 1 1 44 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 29 41 U A - - MP 119 118 6 123 4 2 2 43 88 -7.604 -2.487 -0.316 -6.225 -5.854 -5.698 -5.494 -1.920 -4.148 -5.901 0.182 -4.936 -5.489 -1.839 -5.783 -3.560 3.772 -5.913 -1.785 -4.054 ML 120 118 6 123 4 1 1 40 85 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 121 118 6 123 4 1 1 40 85 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 122 118 6 123 4 0 0 39 84 -4.568 -4.250 -2.265 -0.520 IL 123 123 5 123 4 1 1 43 88 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 124 124 6 124 3 1 1 45 90 -0.591 -2.027 -3.462 0.000 0.000 0.000 0.000 [ MATL 34 ] 30 - U - - - ML 125 124 6 127 3 1 1 18 37 -8.467 -0.015 -7.121 -2.443 -2.279 -3.211 1.808 D 126 124 6 127 3 0 0 17 36 -7.237 -2.750 -0.243 IL 127 127 3 127 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 31 - A - - - ML 128 127 3 130 3 1 1 17 36 -8.467 -0.162 -3.270 1.081 -1.295 -0.584 -0.303 D 129 127 3 130 3 0 0 16 35 -7.237 -2.750 -0.243 IL 130 130 3 130 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 32 - U - - - ML 131 130 3 133 3 1 1 16 34 -8.321 -0.167 -3.238 -2.164 -2.045 -2.924 1.767 D 132 130 3 133 3 0 0 15 33 -7.920 -3.433 -0.147 IL 133 133 3 133 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 33 - U - - - ML 134 133 3 136 3 1 1 15 33 -8.172 -0.018 -6.826 -1.878 -1.807 -2.629 1.714 D 135 133 3 136 3 0 0 13 32 -8.348 -3.861 -0.108 IL 136 136 3 136 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 34 - A - - - ML 137 136 3 139 3 1 1 13 31 -8.172 -0.018 -6.826 1.796 -2.793 -2.383 -2.378 D 138 136 3 139 3 0 0 12 30 -8.348 -3.861 -0.108 IL 139 139 3 139 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 35 - u - - - ML 140 139 3 142 2 1 1 1 1 * 0.000 0.368 -0.941 -1.209 0.813 D 141 139 3 142 2 0 0 0 0 * 0.000 IL 142 142 3 142 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 40 ] - - - - - - E 143 142 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME SpF51_sRNA ACC RF02438 DESC Streptococcus sRNA SpF51 LENG 45 MAXL 118 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 4 17:54:51 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02438/CM NSEQ 8 EFFN 4.699219 CKSUM 3157105905 STATS LOCAL MSV -6.9458 0.71955 STATS LOCAL VITERBI -7.7056 0.71955 STATS LOCAL FORWARD -3.5524 0.71955 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.36498 1.53084 1.68705 1.06945 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 0.00000 * 1 0.06222 4.10392 3.75582 3.89070 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 2 3.17527 4.09161 0.07903 4.04571 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 3 3.20607 1.87579 3.01589 0.27806 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 4 0.87588 3.05358 0.93496 1.93995 4 a - - < 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 5 4.08698 2.80956 3.94986 0.10123 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 6 0.06222 4.10392 3.75582 3.89070 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 7 3.53328 4.50207 0.05950 4.04731 7 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 8 2.72068 1.96997 3.24628 0.27999 8 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 9 3.85508 0.07581 4.37552 3.23780 9 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 10 3.44505 3.27743 3.98497 0.09236 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 11 3.85508 0.07581 4.37552 3.23780 11 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 12 2.93376 0.27769 3.55781 1.82779 12 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 13 3.44505 3.27743 3.98497 0.09236 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 14 0.06222 4.10392 3.75582 3.89070 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 15 0.06222 4.10392 3.75582 3.89070 15 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 16 0.11574 4.14112 2.64044 3.81408 16 A - - > 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 17 3.04795 2.11063 2.84310 0.25730 17 U - - > 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 18 0.70516 3.17273 0.88626 2.95874 18 a - - > 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 19 4.13206 0.09907 3.91619 2.84120 19 C - - > 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 20 0.06222 4.10392 3.75582 3.89070 20 A - - - 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 21 1.77988 0.57985 2.82229 1.55169 21 C - - - 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 22 1.31925 2.19286 1.90633 0.74984 22 u - - - 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 23 1.17030 2.31635 2.51739 0.67251 23 U - - - 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 24 0.31645 3.72752 1.53554 3.44591 24 A - - < 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 25 3.17089 4.08479 0.07953 4.03644 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 26 4.13762 0.09455 4.00935 2.88046 26 C - - < 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 27 4.13084 0.09483 4.00544 2.87913 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 28 4.12594 0.09503 4.00261 2.87816 28 C - - < 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 29 4.08144 2.80889 3.94670 0.10145 29 U - - < 1.38629 1.38629 1.38629 1.38629 0.11272 4.34127 2.36892 1.46634 0.26236 1.09861 0.40547 30 3.29402 3.14800 3.83108 0.10728 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02873 4.25727 4.25727 1.46634 0.26236 2.21784 0.11524 31 0.60953 2.35426 1.80785 1.62242 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.13929 4.25727 2.15532 1.46634 0.26236 2.21784 0.11524 32 3.09428 2.97872 3.62695 0.13098 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.14551 4.15002 2.12315 1.46634 0.26236 2.79543 0.06303 33 2.88438 2.80250 3.41140 0.16198 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03582 4.04033 4.04033 1.46634 0.26236 3.13375 0.04453 34 0.11364 3.52817 3.22488 3.26216 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03582 4.04033 4.04033 1.46634 0.26236 0.46863 0.98312 35 1.12352 2.09834 2.28443 0.79767 35 u - - _ 1.38629 1.38629 1.38629 1.38629 0.24705 1.58644 4.25155 1.25282 0.33645 0.23388 1.56760 36 0.11564 4.14284 2.64076 3.81581 41 A - - > 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 37 3.15819 4.16251 0.08140 3.90676 42 G - - > 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 38 3.15968 4.16506 0.08123 3.90953 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 39 3.16138 4.16799 0.08103 3.91271 44 G - - > 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 40 4.17835 0.09721 3.94015 2.84969 45 C - - > 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 41 3.63107 2.45725 3.49715 0.15367 46 U - - > 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 42 3.44505 3.27743 3.98497 0.09236 47 U - - : 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 43 3.44505 3.27743 3.98497 0.09236 48 U - - : 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 44 3.44505 3.27743 3.98497 0.09236 49 U - - : 1.38629 1.38629 1.38629 1.38629 0.02639 4.34127 4.34127 1.46634 0.26236 1.09861 0.40547 45 3.44505 3.27743 3.98497 0.09236 50 U - - : 1.38629 1.38629 1.38629 1.38629 0.01328 4.32816 * 1.46634 0.26236 0.00000 * //