# STOCKHOLM 1.0
#=GF ID Spd-sr07
#=GF AC RF02418
#=GF DE Streptococcus sRNA Spd-sr07
#=GF AU Eberhardt R; 0000-0001-6152-1369
#=GF GA 55.0
#=GF NC 45.8
#=GF TC 92.7
#=GF SE Predicted; WAR
#=GF SS Predicted; WAR
#=GF TP Gene; sRNA;
#=GF BM cmbuild -F CM SEED
#=GF CB cmcalibrate --mpi CM
#=GF SM cmsearch --cpu 4 --verbose --nohmmonly -T 34.80 -Z 2958934 CM SEQDB
#=GF DR SO; 0000370; small_regulatory_ncRNA;
#=GF RN [1]
#=GF RM 19854910
#=GF RT Identification and characterization of noncoding small RNAs in
#=GF RT Streptococcus pneumoniae serotype 2 strain D39.
#=GF RA Tsui HC, Mukherjee D, Ray VA, Sham LT, Feig AL, Winkler ME
#=GF RL J Bacteriol. 2010;192:264-279.
#=GF WK Streptococcus_sRNA
#=GF SQ 3

CP000936.1/940677-940739 UACAGAAGAUUUGGAAUAAGCAAAA-AGCUUUAAAUCAAUAGUCUAAACUGCUUGAUUUAAAGC
CP002121.1/897968-898031 UACAGAAGAUUUGGAAUAAGCAAAAAAGCUUUAAAUCAAUAGUCUAAACUGCUUGAUUUAAAGC
CP000920.1/841930-841992 UACAGAAGAUUUGGAAUAAGCAAAA-AUCUUUAAAUCAAUAGUCUAAACUGCUUGAUUUAAAGC
#=GC SS_cons             :::::::::::::::::::::::::.:<<<<<<<<<<<<<<<<____>>>>->>>>>>>>>>>>
#=GC RF                  UACAGAAGAUUUGGAAUAAGCAAAA.AgCUUUAAAUCAAuAGUCUAAACUgCUUGAUUUAAAGc
//
