INFERNAL1/a [1.1.5 | Sep 2023] NAME snoR122 ACC RF02407 DESC Small nucleolar RNA snoR122 STATES 226 NODES 76 CLEN 74 W 160 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 11 02:14:24 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02407/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 2.472656 CKSUM 609572834 NULL 0.000 0.000 0.000 0.000 GA 36.00 TC 36.00 NC 35.80 EFP7GF -7.2302 0.71869 ECMLC 0.64242 -10.01911 -0.37978 1600000 586899 0.002045 ECMGC 0.38993 -15.90772 -2.57471 1600000 72435 0.005522 ECMLI 0.47106 -9.60320 2.26984 1600000 322239 0.003724 ECMGI 0.44056 -6.84899 4.26113 1600000 53430 0.007486 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 160 246 -7.155 -7.362 -0.046 -5.776 IL 1 1 2 1 4 3 30 162 248 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 2 30 162 247 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 3 30 160 246 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 4 2 3 5 3 0 25 157 242 -11.551 -1.585 -0.585 IL 5 5 3 5 3 4 31 166 253 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 2 29 159 244 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 7 5 3 8 3 0 24 156 241 -11.551 -1.585 -0.585 IL 8 8 3 8 3 3 31 165 251 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - C - - - ML 9 8 3 11 3 2 28 157 243 -5.546 -0.063 -5.546 -1.863 1.616 -2.057 -1.251 D 10 8 3 11 3 0 24 154 239 -11.551 -1.585 -0.585 IL 11 11 3 11 3 3 30 164 250 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - C - - - ML 12 11 3 14 3 2 27 156 241 -5.546 -0.063 -5.546 -1.863 1.616 -2.057 -1.251 D 13 11 3 14 3 0 23 153 238 -11.551 -1.585 -0.585 IL 14 14 3 14 3 3 29 162 248 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 2 27 155 240 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 16 14 3 17 3 0 22 152 237 -11.551 -1.585 -0.585 IL 17 17 3 17 3 3 28 161 247 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 1 26 154 239 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 19 17 3 20 3 0 22 150 235 -11.551 -1.585 -0.585 IL 20 20 3 20 3 2 27 160 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 25 152 237 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 22 20 3 23 3 0 21 149 234 -11.551 -1.585 -0.585 IL 23 23 3 23 3 2 27 158 244 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 1 24 151 236 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 25 23 3 26 3 0 20 148 232 -11.551 -1.585 -0.585 IL 26 26 3 26 3 2 26 157 243 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 1 23 150 234 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 28 26 3 29 3 0 20 146 231 -11.551 -1.585 -0.585 IL 29 29 3 29 3 2 25 156 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 30 29 3 32 3 1 23 148 233 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 31 29 3 32 3 0 19 145 229 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 24 155 240 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 1 22 147 231 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 34 32 3 35 3 0 18 144 228 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 23 153 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - u - - - ML 36 35 3 38 3 1 21 146 230 -5.546 -0.063 -5.546 0.499 -0.833 -0.847 0.556 D 37 35 3 38 3 0 18 143 227 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 23 152 237 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - u - - - ML 39 38 3 41 3 1 20 144 228 -5.546 -0.063 -5.546 -0.757 -0.920 0.518 0.534 D 40 38 3 41 3 0 17 142 225 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 22 151 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - c - - - ML 42 41 3 44 3 1 19 143 227 -5.546 -0.271 -2.737 0.013 0.923 -1.111 -0.663 D 43 41 3 44 3 0 17 141 224 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 21 149 234 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - c - - - ML 45 44 3 47 3 1 19 142 225 -5.348 -0.073 -5.348 -0.917 0.760 -1.075 0.382 D 46 44 3 47 3 0 16 140 223 -13.137 -0.362 -2.171 IL 47 47 3 47 3 1 21 148 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - U - - - ML 48 47 3 50 3 1 18 140 224 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 49 47 3 50 3 0 14 137 220 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 20 147 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - u - - - ML 51 50 3 53 3 1 17 139 222 -5.546 -0.063 -5.546 0.494 -0.833 -0.847 0.561 D 52 50 3 53 3 0 13 136 219 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 19 145 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - a - - - ML 54 53 3 56 3 1 17 138 221 -5.546 -0.063 -5.546 0.397 -0.026 -0.729 0.135 D 55 53 3 56 3 0 12 135 217 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 18 144 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - A - - - ML 57 56 3 59 3 1 16 136 219 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 58 56 3 59 3 0 12 133 216 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 18 143 227 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - c - - - ML 60 59 3 62 3 1 15 135 218 -5.546 -0.063 -5.546 0.013 0.923 -1.111 -0.663 D 61 59 3 62 3 0 11 132 214 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 17 141 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - A - - - ML 63 62 3 65 3 1 15 134 216 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 64 62 3 65 3 0 10 130 213 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 16 140 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - A - - - ML 66 65 3 68 3 1 14 132 215 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 67 65 3 68 3 0 10 129 211 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 16 139 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - U - - - ML 69 68 3 71 3 1 14 131 213 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 70 68 3 71 3 0 9 128 210 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 15 137 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - U - - - ML 72 71 3 74 3 1 13 130 212 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 73 71 3 74 3 0 8 126 208 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 15 136 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - G - - - ML 75 74 3 77 3 1 12 128 210 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 76 74 3 77 3 0 8 125 207 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 14 135 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - C - - - ML 78 77 3 80 3 1 12 127 209 -5.546 -0.063 -5.546 -1.863 1.616 -2.057 -1.251 D 79 77 3 80 3 0 7 124 205 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 13 133 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - A - - - ML 81 80 3 83 3 1 11 126 207 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 82 80 3 83 3 0 7 122 204 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 13 132 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - C - - - ML 84 83 3 86 3 1 10 124 206 -5.546 -0.063 -5.546 -1.863 1.616 -2.057 -1.251 D 85 83 3 86 3 0 6 121 202 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 12 131 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - G - - - ML 87 86 3 89 3 1 10 123 204 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 88 86 3 89 3 0 5 119 201 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 11 129 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - U - - - ML 90 89 3 92 3 1 9 121 203 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 91 89 3 92 3 0 5 118 199 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 11 128 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - A - - - ML 93 92 3 95 3 1 9 120 201 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 94 92 3 95 3 0 4 117 198 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 10 127 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - U - - - ML 96 95 3 98 3 1 8 119 200 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 97 95 3 98 3 0 4 115 196 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 9 125 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - U - - - ML 99 98 3 101 3 1 8 117 198 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 100 98 3 101 3 0 3 114 194 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 9 124 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - A - - - ML 102 101 3 104 3 1 7 116 196 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 103 101 3 104 3 0 3 113 193 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 8 123 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - U - - - ML 105 104 3 107 3 1 6 114 195 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 106 104 3 107 3 0 2 111 191 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 7 121 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - C - - - ML 108 107 3 110 3 1 5 113 193 -5.546 -0.063 -5.546 -1.863 1.616 -2.057 -1.251 D 109 107 3 110 3 0 2 110 190 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 6 120 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - A - - - ML 111 110 3 113 3 1 4 112 192 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 112 110 3 113 3 0 1 109 188 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 5 118 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - G - - - ML 114 113 3 116 3 1 3 110 190 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 115 113 3 116 3 0 1 107 187 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 5 117 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - A - - - ML 117 116 3 119 3 1 2 109 188 -5.546 -0.271 -2.737 1.689 -2.124 -1.864 -1.876 D 118 116 3 119 3 0 1 106 186 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 4 116 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - U - - - ML 120 119 3 122 3 1 2 107 187 -5.348 -0.320 -2.521 -1.264 -1.004 -1.398 1.436 D 121 119 3 122 3 0 0 106 185 -13.137 -0.362 -2.171 IL 122 122 3 122 3 1 4 115 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - u - - - ML 123 122 3 125 3 1 2 106 185 -5.345 -0.073 -5.345 0.186 -0.698 -0.722 0.714 D 124 122 3 125 3 0 0 104 183 -13.151 -0.359 -2.185 IL 125 125 3 125 3 1 3 113 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - U - - - ML 126 125 3 128 3 1 2 105 184 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 127 125 3 128 3 0 0 101 180 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 3 112 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - U - - - ML 129 128 3 131 3 1 1 103 182 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 130 128 3 131 3 0 0 100 178 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 3 110 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - U - - - ML 132 131 3 134 3 1 1 102 180 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 133 131 3 134 3 0 0 98 177 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 2 109 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - C - - - ML 135 134 3 137 3 1 1 100 179 -5.546 -0.063 -5.546 -1.863 1.616 -2.057 -1.251 D 136 134 3 137 3 0 0 97 175 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 2 107 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - a - - - ML 138 137 3 140 3 1 1 99 177 -5.546 -0.063 -5.546 0.857 0.016 -0.943 -0.606 D 139 137 3 140 3 0 0 95 173 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 2 106 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - G - - - ML 141 140 3 143 3 1 1 97 175 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 142 140 3 143 3 0 0 94 171 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 105 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - U - - - ML 144 143 3 146 3 1 1 96 174 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 145 143 3 146 3 0 0 92 170 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 103 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - G - - - ML 147 146 3 149 3 1 1 94 172 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 148 146 3 149 3 0 0 91 168 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 102 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - A - - - ML 150 149 3 152 3 1 1 93 170 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 151 149 3 152 3 0 0 89 166 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 100 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 51 - U - - - ML 153 152 3 155 3 1 1 91 168 -5.546 -0.063 -5.546 -1.077 0.109 -1.247 1.019 D 154 152 3 155 3 0 0 88 164 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 99 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 52 - G - - - ML 156 155 3 158 3 1 1 90 166 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 157 155 3 158 3 0 0 86 163 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 97 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 53 - A - - - ML 159 158 3 161 3 1 1 88 165 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 160 158 3 161 3 0 0 85 161 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 96 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 54 - a - - - ML 162 161 3 164 3 1 1 87 163 -5.546 -0.063 -5.546 0.937 -1.224 0.154 -0.875 D 163 161 3 164 3 0 0 83 159 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 94 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 55 - U - - - ML 165 164 3 167 3 1 1 85 161 -2.601 -0.297 -5.546 -1.618 -1.299 -1.775 1.573 D 166 164 3 167 3 0 0 82 158 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 2 85 161 -5.121 -0.042 -12.765 0.000 0.000 0.000 0.000 [ MATL 56 ] 57 - A - - - ML 168 167 3 170 3 1 1 84 160 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 169 167 3 170 3 0 0 80 156 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 92 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 58 - U - - - ML 171 170 3 173 3 1 1 82 158 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 172 170 3 173 3 0 0 79 154 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 90 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 59 - C - - - ML 174 173 3 176 3 1 1 81 156 -5.546 -0.063 -5.546 -1.863 1.616 -2.057 -1.251 D 175 173 3 176 3 0 0 77 152 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 89 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 60 - A - - - ML 177 176 3 179 3 1 1 79 154 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 178 176 3 179 3 0 0 75 150 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 87 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 61 - C - - - ML 180 179 3 182 3 1 1 77 152 -5.546 -0.063 -5.546 -1.863 1.616 -2.057 -1.251 D 181 179 3 182 3 0 0 74 148 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 85 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 62 - U - - - ML 183 182 3 185 3 1 1 76 150 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 184 182 3 185 3 0 0 72 146 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 63 - u - - - ML 186 185 3 188 3 1 1 74 148 -5.546 -0.063 -5.546 0.499 -0.833 -0.847 0.556 D 187 185 3 188 3 0 0 70 144 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 64 - A - - - ML 189 188 3 191 3 1 1 72 146 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 190 188 3 191 3 0 0 68 142 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 65 - U - - - ML 192 191 3 194 3 1 1 70 144 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 193 191 3 194 3 0 0 66 139 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 66 - g - - - ML 195 194 3 197 3 1 1 69 142 -5.546 -0.063 -5.546 -0.612 -0.149 0.470 0.083 D 196 194 3 197 3 0 0 64 137 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 67 - U - - - ML 198 197 3 200 3 1 1 67 140 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 199 197 3 200 3 0 0 62 135 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 68 - C - - - ML 201 200 3 203 3 1 1 65 137 -5.546 -0.063 -5.546 -1.863 1.616 -2.057 -1.251 D 202 200 3 203 3 0 0 60 132 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 69 - U - - - ML 204 203 3 206 3 1 1 63 135 -5.546 -0.063 -5.546 -1.618 -1.299 -1.775 1.573 D 205 203 3 206 3 0 0 58 129 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 70 - G - - - ML 207 206 3 209 3 1 1 61 132 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 208 206 3 209 3 0 0 56 126 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 71 - A - - - ML 210 209 3 212 3 1 1 58 129 -5.546 -0.063 -5.546 1.689 -2.124 -1.864 -1.876 D 211 209 3 212 3 0 0 53 123 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 72 - G - - - ML 213 212 3 215 3 1 1 56 126 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 214 212 3 215 3 0 0 49 119 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 73 - G - - - ML 216 215 3 218 3 1 1 53 123 -5.546 -0.063 -5.546 -1.690 -2.422 1.712 -2.137 D 217 215 3 218 3 0 0 45 114 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 1 64 135 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 74 - C - - - ML 219 218 3 221 3 1 1 49 118 -5.546 -0.063 -5.546 -1.199 1.018 -1.378 0.207 D 220 218 3 221 3 0 0 32 101 -11.551 -1.585 -0.585 IL 221 221 3 221 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 75 - A - - - ML 222 221 3 224 2 1 1 1 1 * 0.000 1.689 -2.124 -1.864 -1.876 D 223 221 3 224 2 0 0 0 0 * 0.000 IL 224 224 3 224 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 75 ] - - - - - - E 225 224 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME snoR122 ACC RF02407 DESC Small nucleolar RNA snoR122 LENG 74 MAXL 160 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Thu Jul 11 02:14:24 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02407/CM NSEQ 4 EFFN 2.472656 CKSUM 609572834 STATS LOCAL MSV -8.1865 0.71869 STATS LOCAL VITERBI -9.3275 0.71869 STATS LOCAL FORWARD -3.3776 0.71869 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.24641 1.61280 1.53876 1.20902 1.38629 1.38629 1.38629 1.38629 0.02615 4.95941 3.97423 0.39730 1.11515 0.00000 * 1 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 2 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 3 2.67766 0.26634 2.81230 2.25348 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 4 2.67766 0.26634 2.81230 2.25348 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 5 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 6 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 7 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 8 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 9 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 10 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 11 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 12 1.04054 1.96385 1.97355 1.00115 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 13 1.91106 2.02369 1.02744 1.01614 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 14 1.37703 0.74658 2.15630 1.84558 - c - - : 1.38629 1.38629 1.38629 1.38629 0.18797 3.84431 1.89739 1.46634 0.26236 1.09861 0.40547 15 2.02202 0.85982 2.13127 1.12181 - c - - : 1.38629 1.38629 1.38629 1.38629 0.05036 3.70671 3.70671 1.46634 0.26236 0.25109 1.50487 16 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 17 1.04420 1.96370 1.97372 0.99764 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 18 1.11132 1.40437 1.89180 1.29261 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 19 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 20 1.37703 0.74658 2.15630 1.84558 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 21 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 22 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 23 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 24 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 25 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 26 2.67766 0.26634 2.81230 2.25348 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 27 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 28 2.67766 0.26634 2.81230 2.25348 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 29 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 30 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 31 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 32 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 33 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 34 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 35 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 36 2.67766 0.26634 2.81230 2.25348 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 37 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 38 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 39 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.18797 3.84431 1.89739 1.46634 0.26236 1.09861 0.40547 40 2.26230 2.08246 2.35555 0.39093 - U - - : 1.38629 1.38629 1.38629 1.38629 0.22157 3.70671 1.74766 1.46634 0.26236 0.25109 1.50487 41 1.25733 1.87033 1.88692 0.89165 - u - - : 1.38629 1.38629 1.38629 1.38629 0.05047 3.70461 3.70461 1.46634 0.26236 0.24841 1.51431 42 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 43 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 44 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 45 2.67766 0.26634 2.81230 2.25348 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 46 0.79223 1.37498 2.03993 1.80616 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 47 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 48 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 49 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 50 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 51 2.13252 1.31070 2.25037 0.68029 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 52 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 53 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 54 0.73686 2.23501 1.27971 1.99307 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 55 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.20601 1.80317 3.84431 0.02916 3.54954 1.09861 0.40547 56 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 57 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 58 2.67766 0.26634 2.81230 2.25348 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 59 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 60 2.67766 0.26634 2.81230 2.25348 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 61 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 62 1.04054 1.96385 1.97355 1.00115 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 63 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 64 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 65 1.81052 1.48952 1.06072 1.32900 - g - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 66 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 67 2.67766 0.26634 2.81230 2.25348 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 68 2.50763 2.28684 2.61660 0.29585 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 69 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 70 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 71 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 72 2.55755 3.06487 0.19965 2.86770 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 73 2.21750 0.68040 2.34167 1.24294 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04375 3.84431 3.84431 1.46634 0.26236 1.09861 0.40547 74 0.21584 2.85848 2.67845 2.68657 - A - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //