INFERNAL1/a [1.1.5 | Sep 2023] NAME snoR120 ACC RF02406 DESC Small nucleolar RNA snoR120 STATES 226 NODES 76 CLEN 74 W 306 ALPH RNA RF no CONS yes MAP yes DATE Sun Jul 7 12:59:54 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02406/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 2.417969 CKSUM 1035491367 NULL 0.000 0.000 0.000 0.000 GA 55.00 TC 60.00 NC 44.50 EFP7GF -7.2048 0.71867 ECMLC 0.61278 -10.42245 0.20220 1600000 806678 0.001488 ECMGC 0.37291 -16.19513 -1.57471 1600000 93300 0.004287 ECMLI 0.43480 -10.60439 2.95550 1600000 436223 0.002751 ECMGI 0.45811 -5.39497 5.40390 1600000 56307 0.007104 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 306 591 -7.135 -7.342 -0.047 -5.757 IL 1 1 2 1 4 1 28 309 593 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 28 308 593 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 27 307 592 -5.529 -0.064 -5.529 -1.663 -2.384 1.705 -2.099 D 4 2 3 5 3 0 23 304 589 -11.551 -1.585 -0.585 IL 5 5 3 5 3 2 29 311 595 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 26 306 591 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 7 5 3 8 3 0 22 303 588 -11.551 -1.585 -0.585 IL 8 8 3 8 3 2 28 310 594 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 1 26 305 590 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 10 8 3 11 3 0 21 302 587 -11.551 -1.585 -0.585 IL 11 11 3 11 3 2 27 309 593 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 25 304 588 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 13 11 3 14 3 0 21 301 585 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 27 308 592 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 24 303 587 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 16 14 3 17 3 0 20 300 584 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 26 306 591 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 23 302 586 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 19 17 3 20 3 0 19 299 583 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 25 305 590 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - G - - - ML 21 20 3 23 3 1 23 301 585 -5.529 -0.064 -5.529 -1.663 -2.384 1.705 -2.099 D 22 20 3 23 3 0 18 298 582 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 24 304 589 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 22 300 584 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 25 23 3 26 3 0 18 297 581 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 24 303 588 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 27 26 3 29 3 1 21 298 583 -5.529 -0.064 -5.529 -1.663 -2.384 1.705 -2.099 D 28 26 3 29 3 0 17 295 580 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 23 302 587 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 30 29 3 32 3 1 20 297 582 -5.529 -0.064 -5.529 -1.663 -2.384 1.705 -2.099 D 31 29 3 32 3 0 16 294 579 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 22 301 586 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 20 296 581 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 34 32 3 35 3 0 16 293 578 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 21 300 585 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 36 35 3 38 3 1 19 295 580 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 37 35 3 38 3 0 15 292 577 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 20 299 584 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - C - - - ML 39 38 3 41 3 1 18 294 579 -5.529 -0.064 -5.529 -1.828 1.606 -2.020 -1.222 D 40 38 3 41 3 0 14 291 576 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 20 298 583 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 42 41 3 44 3 1 17 293 578 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 43 41 3 44 3 0 14 290 575 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 19 297 582 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - a - - - ML 45 44 3 47 3 1 16 292 577 -5.529 -0.064 -5.529 0.866 -0.885 -0.874 0.124 D 46 44 3 47 3 0 13 289 574 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 18 296 580 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - A - - - ML 48 47 3 50 3 1 15 291 576 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 49 47 3 50 3 0 12 288 573 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 17 295 579 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - U - - - ML 51 50 3 53 3 1 15 290 575 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 52 50 3 53 3 0 12 287 572 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 16 294 578 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - A - - - ML 54 53 3 56 3 1 14 289 574 -5.529 -0.520 -1.832 1.678 -2.083 -1.823 -1.833 D 55 53 3 56 3 0 11 286 571 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 17 294 578 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - A - - - ML 57 56 3 59 3 1 15 289 574 -5.096 -0.087 -5.096 1.305 -1.170 -0.864 -0.900 D 58 56 3 59 3 0 11 285 569 -13.870 -3.905 -0.100 IL 59 59 3 59 3 1 17 293 577 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - C - - - ML 60 59 3 62 3 1 14 288 572 -5.096 -0.087 -5.096 -1.013 1.237 -1.129 -0.534 D 61 59 3 62 3 0 10 284 569 -13.870 -3.905 -0.100 IL 62 62 3 62 3 1 16 291 576 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - U - - - ML 63 62 3 65 3 1 13 287 571 -5.096 -0.087 -5.096 -0.882 -0.680 -0.974 1.217 D 64 62 3 65 3 0 10 284 569 -13.870 -3.905 -0.100 IL 65 65 3 65 3 1 15 290 575 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - C - - - ML 66 65 3 68 3 1 12 286 570 -5.096 -0.087 -5.096 -1.013 1.237 -1.129 -0.534 D 67 65 3 68 3 0 10 284 569 -13.870 -0.207 -2.905 IL 68 68 3 68 3 1 14 289 574 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - a - - - ML 69 68 3 71 3 1 12 284 569 -5.529 -0.064 -5.529 0.877 -0.031 -0.930 -0.600 D 70 68 3 71 3 0 7 281 566 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 14 288 573 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - a - - - ML 72 71 3 74 3 1 11 283 568 -5.529 -0.064 -5.529 0.866 -0.885 -0.874 0.124 D 73 71 3 74 3 0 7 280 565 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 13 287 572 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - a - - - ML 75 74 3 77 3 1 11 282 567 -5.529 -0.064 -5.529 0.877 -0.031 -0.930 -0.600 D 76 74 3 77 3 0 6 279 564 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 12 286 571 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - u - - - ML 78 77 3 80 3 1 10 281 566 -5.529 -0.064 -5.529 -1.053 0.601 -1.223 0.654 D 79 77 3 80 3 0 5 278 563 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 12 285 570 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - G - - - ML 81 80 3 83 3 1 9 280 565 -5.529 -0.064 -5.529 -1.663 -2.384 1.705 -2.099 D 82 80 3 83 3 0 5 277 562 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 11 284 569 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - U - - - ML 84 83 3 86 3 1 9 279 564 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 85 83 3 86 3 0 4 276 560 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 10 283 568 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - G - - - ML 87 86 3 89 3 1 8 278 563 -5.529 -0.064 -5.529 -1.663 -2.384 1.705 -2.099 D 88 86 3 89 3 0 3 274 559 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 10 282 567 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - A - - - ML 90 89 3 92 3 1 7 277 562 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 91 89 3 92 3 0 3 273 557 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 9 281 565 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - A - - - ML 93 92 3 95 3 1 7 276 561 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 94 92 3 95 3 0 2 271 555 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 8 280 564 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - U - - - ML 96 95 3 98 3 1 6 275 560 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 97 95 3 98 3 0 2 268 553 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 8 279 563 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - C - - - ML 99 98 3 101 3 1 6 274 559 -5.529 -0.064 -5.529 -1.828 1.606 -2.020 -1.222 D 100 98 3 101 3 0 1 264 549 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 7 278 563 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - A - - - ML 102 101 3 104 3 1 5 273 558 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 103 101 3 104 3 0 1 256 540 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 7 277 562 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - A - - - ML 105 104 3 107 3 1 5 272 557 -1.832 -0.520 -5.529 1.678 -2.083 -1.823 -1.833 D 106 104 3 107 3 0 0 167 452 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 8 291 576 -0.093 -3.996 -17.551 0.000 0.000 0.000 0.000 [ MATL 36 ] 53 - A - - - ML 108 107 3 110 3 1 4 114 194 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 109 107 3 110 3 0 0 110 190 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 6 120 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 54 - C - - - ML 111 110 3 113 3 1 4 112 192 -5.529 -0.064 -5.529 -1.828 1.606 -2.020 -1.222 D 112 110 3 113 3 0 0 109 189 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 5 119 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 55 - c - - - ML 114 113 3 116 3 1 3 111 191 -5.529 -0.064 -5.529 -0.067 0.969 -1.127 -0.667 D 115 113 3 116 3 0 0 107 187 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 5 118 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 56 - a - - - ML 117 116 3 119 3 1 3 109 189 -5.529 -0.064 -5.529 0.915 -1.205 0.174 -0.856 D 118 116 3 119 3 0 0 106 186 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 4 116 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 57 - U - - - ML 120 119 3 122 3 1 2 108 188 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 121 119 3 122 3 0 0 105 184 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 4 115 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 58 - G - - - ML 123 122 3 125 3 1 2 107 186 -5.529 -0.064 -5.529 -1.663 -2.384 1.705 -2.099 D 124 122 3 125 3 0 0 103 182 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 3 114 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 59 - u - - - ML 126 125 3 128 3 1 2 105 184 -5.529 -0.064 -5.529 -0.014 -0.853 -0.937 0.951 D 127 125 3 128 3 0 0 102 181 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 3 112 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 60 - A - - - ML 129 128 3 131 3 1 1 104 183 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 130 128 3 131 3 0 0 100 179 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 3 111 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 61 - C - - - ML 132 131 3 134 3 1 1 102 181 -5.529 -0.064 -5.529 -1.828 1.606 -2.020 -1.222 D 133 131 3 134 3 0 0 99 177 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 2 109 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 62 - C - - - ML 135 134 3 137 3 1 1 101 179 -5.529 -0.064 -5.529 -1.828 1.606 -2.020 -1.222 D 136 134 3 137 3 0 0 97 176 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 2 108 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 63 - A - - - ML 138 137 3 140 3 1 1 99 178 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 139 137 3 140 3 0 0 96 174 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 2 106 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 64 - a - - - ML 141 140 3 143 3 1 1 98 176 -5.529 -0.064 -5.529 0.915 -1.205 0.174 -0.856 D 142 140 3 143 3 0 0 94 172 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 105 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 65 - a - - - ML 144 143 3 146 3 1 1 96 174 -5.529 -0.064 -5.529 0.866 -0.885 -0.874 0.124 D 145 143 3 146 3 0 0 93 170 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 104 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 66 - U - - - ML 147 146 3 149 3 1 1 95 173 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 148 146 3 149 3 0 0 91 169 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 102 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 67 - u - - - ML 150 149 3 152 3 1 1 93 171 -5.529 -0.064 -5.529 -0.014 -0.853 -0.937 0.951 D 151 149 3 152 3 0 0 90 167 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 101 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 68 - U - - - ML 153 152 3 155 3 1 1 92 169 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 154 152 3 155 3 0 0 88 165 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 99 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 69 - U - - - ML 156 155 3 158 3 1 1 90 167 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 157 155 3 158 3 0 0 87 163 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 98 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 70 - G - - - ML 159 158 3 161 3 1 1 89 166 -5.529 -0.064 -5.529 -1.663 -2.384 1.705 -2.099 D 160 158 3 161 3 0 0 85 162 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 96 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 71 - C - - - ML 162 161 3 164 3 1 1 87 164 -5.529 -0.064 -5.529 -1.828 1.606 -2.020 -1.222 D 163 161 3 164 3 0 0 84 160 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 95 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 72 - U - - - ML 165 164 3 167 3 1 1 86 162 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 166 164 3 167 3 0 0 82 158 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 93 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 73 - U - - - ML 168 167 3 170 3 1 1 84 160 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 169 167 3 170 3 0 0 80 156 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 92 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 74 - A - - - ML 171 170 3 173 3 1 1 82 158 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 172 170 3 173 3 0 0 79 154 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 90 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 75 - U - - - ML 174 173 3 176 3 1 1 81 156 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 175 173 3 176 3 0 0 77 152 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 89 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 76 - U - - - ML 177 176 3 179 3 1 1 79 154 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 178 176 3 179 3 0 0 75 150 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 87 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 77 - G - - - ML 180 179 3 182 3 1 1 77 152 -5.529 -0.064 -5.529 -1.663 -2.384 1.705 -2.099 D 181 179 3 182 3 0 0 74 148 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 86 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 78 - A - - - ML 183 182 3 185 3 1 1 76 150 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 184 182 3 185 3 0 0 72 146 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 79 - U - - - ML 186 185 3 188 3 1 1 74 148 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 187 185 3 188 3 0 0 70 144 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 80 - A - - - ML 189 188 3 191 3 1 1 72 146 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 190 188 3 191 3 0 0 68 142 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 81 - U - - - ML 192 191 3 194 3 1 1 71 144 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 193 191 3 194 3 0 0 66 139 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 82 - U - - - ML 195 194 3 197 3 1 1 69 142 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 196 194 3 197 3 0 0 64 137 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 83 - C - - - ML 198 197 3 200 3 1 1 67 140 -5.529 -0.064 -5.529 -1.828 1.606 -2.020 -1.222 D 199 197 3 200 3 0 0 62 135 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 84 - U - - - ML 201 200 3 203 3 1 1 65 137 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 202 200 3 203 3 0 0 60 132 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 85 - G - - - ML 204 203 3 206 3 1 1 63 135 -5.529 -0.064 -5.529 -1.663 -2.384 1.705 -2.099 D 205 203 3 206 3 0 0 58 129 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 86 - A - - - ML 207 206 3 209 3 1 1 61 132 -5.529 -0.064 -5.529 1.678 -2.083 -1.823 -1.833 D 208 206 3 209 3 0 0 56 126 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 1 70 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 87 - U - - - ML 210 209 3 212 3 1 1 58 129 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 211 209 3 212 3 0 0 53 123 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 88 - U - - - ML 213 212 3 215 3 1 1 56 126 -5.529 -0.064 -5.529 -1.586 -1.273 -1.741 1.563 D 214 212 3 215 3 0 0 49 119 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 89 - C - - - ML 216 215 3 218 3 1 1 53 123 -5.529 -0.064 -5.529 -1.828 1.606 -2.020 -1.222 D 217 215 3 218 3 0 0 45 114 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 1 64 135 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 90 - C - - - ML 219 218 3 221 3 1 1 49 118 -5.529 -0.064 -5.529 -1.828 1.606 -2.020 -1.222 D 220 218 3 221 3 0 0 32 101 -11.551 -1.585 -0.585 IL 221 221 3 221 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 91 - A - - - ML 222 221 3 224 2 1 1 1 1 * 0.000 1.678 -2.083 -1.823 -1.833 D 223 221 3 224 2 0 0 0 0 * 0.000 IL 224 224 3 224 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 75 ] - - - - - - E 225 224 3 -1 0 0 0 0 0 // HMMER3/f [3.4 | Aug 2023] NAME snoR120 ACC RF02406 DESC Small nucleolar RNA snoR120 LENG 74 MAXL 306 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Sun Jul 7 12:59:55 2024 COM [1] /hps/software/users/agb/rfam/bin/cmbuild -F CM SEED COM [2] /hps/software/users/agb/rfam/bin/cmcalibrate --cpu 8 /nfs/production/agb/rfam/15/rescan/families/RF02406/CM NSEQ 4 EFFN 2.417969 CKSUM 1035491367 STATS LOCAL MSV -7.8429 0.71867 STATS LOCAL VITERBI -9.3903 0.71867 STATS LOCAL FORWARD -3.2239 0.71867 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.09941 1.61839 1.62361 1.30368 1.38629 1.38629 1.38629 1.38629 0.02651 4.94586 3.96069 0.39730 1.11515 0.00000 * 1 2.53900 3.03873 0.20481 2.84122 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 2 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 3 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 4 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 5 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 6 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 7 2.53900 3.03873 0.20481 2.84122 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 8 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 9 2.53900 3.03873 0.20481 2.84122 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 10 2.53900 3.03873 0.20481 2.84122 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 11 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 12 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 13 2.65345 0.27345 2.78651 2.23303 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 14 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 15 0.78570 1.99986 1.99209 1.30036 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 16 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 17 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 18 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.36042 3.83254 1.26954 1.46634 0.26236 1.09861 0.40547 19 0.48202 2.19706 1.98503 2.01024 - A - - : 1.38629 1.38629 1.38629 1.38629 0.06025 3.53237 3.53237 1.46634 0.26236 2.70636 0.06911 20 2.08874 0.52897 2.16874 1.75662 - C - - : 1.38629 1.38629 1.38629 1.38629 0.06025 3.53237 3.53237 1.46634 0.26236 2.70636 0.06911 21 1.99775 1.85785 2.06124 0.54291 - U - - : 1.38629 1.38629 1.38629 1.38629 0.06025 3.53237 3.53237 1.46634 0.26236 2.70636 0.06911 22 2.08874 0.52897 2.16874 1.75662 - C - - : 1.38629 1.38629 1.38629 1.38629 0.06025 3.53237 3.53237 1.46634 0.26236 0.14336 2.01322 23 0.77838 1.40808 2.03067 1.80187 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 24 0.78570 1.99986 1.99209 1.30036 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 25 0.77838 1.40808 2.03067 1.80187 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 26 2.11610 0.96986 2.23427 0.93320 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 27 2.53900 3.03873 0.20481 2.84122 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 28 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 29 2.53900 3.03873 0.20481 2.84122 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 30 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 31 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 32 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 33 2.65345 0.27345 2.78651 2.23303 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 34 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 35 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.36042 1.26954 3.83254 2.77015 0.06470 1.09861 0.40547 36 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 37 2.65345 0.27345 2.78651 2.23303 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 38 1.43292 0.71436 2.16755 1.84880 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 39 0.75219 2.22145 1.26568 1.97929 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 40 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 41 2.53900 3.03873 0.20481 2.84122 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 42 1.39574 1.97776 2.03605 0.72685 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 43 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 44 2.65345 0.27345 2.78651 2.23303 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 45 2.65345 0.27345 2.78651 2.23303 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 46 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 47 0.75219 2.22145 1.26568 1.97929 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 48 0.78570 1.99986 1.99209 1.30036 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 49 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 50 1.39574 1.97776 2.03605 0.72685 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 51 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 52 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 53 2.53900 3.03873 0.20481 2.84122 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 54 2.65345 0.27345 2.78651 2.23303 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 55 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 56 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 57 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 58 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 59 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 60 2.53900 3.03873 0.20481 2.84122 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 61 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 62 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 63 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 64 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 65 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 66 2.65345 0.27345 2.78651 2.23303 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 67 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 68 2.53900 3.03873 0.20481 2.84122 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 69 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 70 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 71 2.48551 2.26851 2.59333 0.30316 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 72 2.65345 0.27345 2.78651 2.23303 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 73 2.65345 0.27345 2.78651 2.23303 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04427 3.83254 3.83254 1.46634 0.26236 1.09861 0.40547 74 0.22295 2.82987 2.64965 2.65709 - A - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //